Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73539992
Identifier: 73539992
GI number: 73539992
Start: 319014
End: 319610
Strand: Direct
Name: 73539992
Synonym: Reut_A0286
Alternate gene names: NA
Gene position: 319014-319610 (Clockwise)
Preceding gene: 73539988
Following gene: 73539993
Centisome position: 8.38
GC content: 69.51
Gene sequence:
>597_bases ATGCCCCTTCCTCAGCCCTGTCAGTGGTTTTCCCGGCTCCGCCTGGTTCTGCCAGCGATGCTCGCCGTGGCCTGCCTCGG CGCGTGCTCGCCGCGCTATGACTGGCGCACGATCCAGTCGGGCGACGGAGGCTATGCGGCGCTCTATCCGGCAAAGCCCA CGAGCGCCGCGCGCGACGTGGCCATCGCTGGACACAAGCTCCCGATGACCATGCAGGCAGCCCGCGTCGACGACACGCTG TTCGCCGTCGGTGTGGTCACGCTGCCGTCTGACGACGCCGAATTGCGGCGCGAAGCGCTGGCCGCGATGCAGTCGGGCCT GGTGGCCAACCTTGGCGTGCATGGCAGCGAACCGGCGCATACGCGCCCGGTGACAATCCAGTCGGCGGACCAGCCCGCGC GGCCGCTCGATGGCGTAGAGGTTCAGGTCAGCGGTGTGTCGCCGCAGGACCGGTCGCCGCGCCGCCTGACCGCGCGGCTT GTGGCCGTGGGCACCAAGGCTTACCAGGCAGTGGTGTTGGAATCGGGCGAGGGCGCGCGCGACCAGCGCAACGCCGAGCA GGTGGAGCAGTTCCTGGGCGGATTCCATCCGTATTGA
Upstream 100 bases:
>100_bases CTTCCCGGATAATACCGGTTTCCGCCCGACGGCAAGGCGTGCCCGCCCGCCGCGCGCCGGTCCCGACAATAAGCGCCGCA CCGTGTACGGCCACGTCCCG
Downstream 100 bases:
>100_bases TCCACCCGGCAAGATTTATTCGAAGGAGAGAAGTGATGCGTTGGGAAGTCTGGCTGGCCTATTTCGCCGCGTGCTGGGTC ATTGCGGTGTCGCCCGGTTC
Product: putative transmembrane protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPLPQPCQWFSRLRLVLPAMLAVACLGACSPRYDWRTIQSGDGGYAALYPAKPTSAARDVAIAGHKLPMTMQAARVDDTL FAVGVVTLPSDDAELRREALAAMQSGLVANLGVHGSEPAHTRPVTIQSADQPARPLDGVEVQVSGVSPQDRSPRRLTARL VAVGTKAYQAVVLESGEGARDQRNAEQVEQFLGGFHPY
Sequences:
>Translated_198_residues MPLPQPCQWFSRLRLVLPAMLAVACLGACSPRYDWRTIQSGDGGYAALYPAKPTSAARDVAIAGHKLPMTMQAARVDDTL FAVGVVTLPSDDAELRREALAAMQSGLVANLGVHGSEPAHTRPVTIQSADQPARPLDGVEVQVSGVSPQDRSPRRLTARL VAVGTKAYQAVVLESGEGARDQRNAEQVEQFLGGFHPY >Mature_197_residues PLPQPCQWFSRLRLVLPAMLAVACLGACSPRYDWRTIQSGDGGYAALYPAKPTSAARDVAIAGHKLPMTMQAARVDDTLF AVGVVTLPSDDAELRREALAAMQSGLVANLGVHGSEPAHTRPVTIQSADQPARPLDGVEVQVSGVSPQDRSPRRLTARLV AVGTKAYQAVVLESGEGARDQRNAEQVEQFLGGFHPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21170; Mature: 21039
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPQPCQWFSRLRLVLPAMLAVACLGACSPRYDWRTIQSGDGGYAALYPAKPTSAARDV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCHHHE AIAGHKLPMTMQAARVDDTLFAVGVVTLPSDDAELRREALAAMQSGLVANLGVHGSEPAH EECCCCCCCEEHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCCCC TRPVTIQSADQPARPLDGVEVQVSGVSPQDRSPRRLTARLVAVGTKAYQAVVLESGEGAR CCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCC DQRNAEQVEQFLGGFHPY CCCCHHHHHHHHCCCCCC >Mature Secondary Structure PLPQPCQWFSRLRLVLPAMLAVACLGACSPRYDWRTIQSGDGGYAALYPAKPTSAARDV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCHHHE AIAGHKLPMTMQAARVDDTLFAVGVVTLPSDDAELRREALAAMQSGLVANLGVHGSEPAH EECCCCCCCEEHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCCCC TRPVTIQSADQPARPLDGVEVQVSGVSPQDRSPRRLTARLVAVGTKAYQAVVLESGEGAR CCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCC DQRNAEQVEQFLGGFHPY CCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA