Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is crp [C]
Identifier: 73539965
GI number: 73539965
Start: 287815
End: 288483
Strand: Reverse
Name: crp [C]
Synonym: Reut_A0259
Alternate gene names: 73539965
Gene position: 288483-287815 (Counterclockwise)
Preceding gene: 73539973
Following gene: 73539964
Centisome position: 7.58
GC content: 62.63
Gene sequence:
>669_bases ATGCTGAACGATTTTGTCGACCGTTGTGTGTGGGCCGCTGACCTCAGTGCCGAGCAGCGTGATCGCGTCCGCCGCGCGAT GTTTGTTCGCGAGTACACGCAAGGCGACTACGTTTGTCATAAGGGTGAAATCGCCGAGCACTGGCTGGGCGTGCTCGAAG GCATCGTCAAGATCACTACCGTGTCGCCGTCCGGCAAGTCGGTCACGTTCACCGGCGTACCGACCGGCGGCTGGTTCGGC GAGGGCGCGGTGCTCAAGTCGGAGATCCGCAAGTACGACGTGATGGCATTGCGCCGCTCGACCATCGCGTTCCTGCCGCG CGACACTTTTCAGTGGTTGCTGGATACCAGCCTGCCGTTCACGCGTTTCCTGCTCACGCAGTTCAACGAGCGGCTCGGCC AGTTCATCGCGGCGGTTGAGTACGAACGCCTGCTCGATATCGACTCGCGCGTGGCGCGCGCAGTCTCGTCGCTGTTCAAT GAGCATCTCTATCCCGGTATCGGCAACACGCTGGAGATCTCGCAGGAAGAGATCGGCCTGCTCGCCGGCATTTCGCGCCA GCGCGCCAACCAGGCGCTCAAGGTGCTCGAGCAGCAGGGCCTGGTGCGCGTGGACTATGGCGTGATCGAAGTGCTGGACC TGGAAGGACTGCGCCAGTACGGCGAGTGA
Upstream 100 bases:
>100_bases TGCCGGCTCCGTGGTGAACGTAAGATAGCCGATGCCTTCCCCCCCGGTTGTCACGCCGGTGACAATTCCGGGTTAATCCC TACACAATGATTTTTTCGCC
Downstream 100 bases:
>100_bases TGCGATGCCAGCGCGCTCCGCGATCGACAACGCCACGCTGCAGGCCTATCGCGAAACCGAGTACCGCGTGCATGGCGATG CGCCGCTGACACTGAAGATC
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: Transcriptional Regulator Crp/Fnr Family; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Regulatory Protein; Transcription Regulator Protein; Transcription Regulator Crp Family; Cyclic-Nucleotide-Gated Cation Channel; CNMP Regulatory Protein; HTH Crp Family Transcriptional Regulator; CAMP-Dependent Transcriptional Regulator; Catabolite Gene Activator; Crp/Fnr Family Transcriptional Regulator
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MLNDFVDRCVWAADLSAEQRDRVRRAMFVREYTQGDYVCHKGEIAEHWLGVLEGIVKITTVSPSGKSVTFTGVPTGGWFG EGAVLKSEIRKYDVMALRRSTIAFLPRDTFQWLLDTSLPFTRFLLTQFNERLGQFIAAVEYERLLDIDSRVARAVSSLFN EHLYPGIGNTLEISQEEIGLLAGISRQRANQALKVLEQQGLVRVDYGVIEVLDLEGLRQYGE
Sequences:
>Translated_222_residues MLNDFVDRCVWAADLSAEQRDRVRRAMFVREYTQGDYVCHKGEIAEHWLGVLEGIVKITTVSPSGKSVTFTGVPTGGWFG EGAVLKSEIRKYDVMALRRSTIAFLPRDTFQWLLDTSLPFTRFLLTQFNERLGQFIAAVEYERLLDIDSRVARAVSSLFN EHLYPGIGNTLEISQEEIGLLAGISRQRANQALKVLEQQGLVRVDYGVIEVLDLEGLRQYGE >Mature_222_residues MLNDFVDRCVWAADLSAEQRDRVRRAMFVREYTQGDYVCHKGEIAEHWLGVLEGIVKITTVSPSGKSVTFTGVPTGGWFG EGAVLKSEIRKYDVMALRRSTIAFLPRDTFQWLLDTSLPFTRFLLTQFNERLGQFIAAVEYERLLDIDSRVARAVSSLFN EHLYPGIGNTLEISQEEIGLLAGISRQRANQALKVLEQQGLVRVDYGVIEVLDLEGLRQYGE
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25134; Mature: 25134
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNDFVDRCVWAADLSAEQRDRVRRAMFVREYTQGDYVCHKGEIAEHWLGVLEGIVKITT CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHEEE VSPSGKSVTFTGVPTGGWFGEGAVLKSEIRKYDVMALRRSTIAFLPRDTFQWLLDTSLPF ECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH TRFLLTQFNERLGQFIAAVEYERLLDIDSRVARAVSSLFNEHLYPGIGNTLEISQEEIGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHH LAGISRQRANQALKVLEQQGLVRVDYGVIEVLDLEGLRQYGE HHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLNDFVDRCVWAADLSAEQRDRVRRAMFVREYTQGDYVCHKGEIAEHWLGVLEGIVKITT CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHEEE VSPSGKSVTFTGVPTGGWFGEGAVLKSEIRKYDVMALRRSTIAFLPRDTFQWLLDTSLPF ECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH TRFLLTQFNERLGQFIAAVEYERLLDIDSRVARAVSSLFNEHLYPGIGNTLEISQEEIGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHH LAGISRQRANQALKVLEQQGLVRVDYGVIEVLDLEGLRQYGE HHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA