Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is argS [H]
Identifier: 73539833
GI number: 73539833
Start: 153181
End: 154968
Strand: Direct
Name: argS [H]
Synonym: Reut_A0127
Alternate gene names: 73539833
Gene position: 153181-154968 (Clockwise)
Preceding gene: 73539831
Following gene: 73539834
Centisome position: 4.02
GC content: 68.29
Gene sequence:
>1788_bases ATGCTGCCTGTTCAGACCTCCAATCTTGCCGCTGCGTTCACTGATGCCGTGCGCGCGCTCGCGCCGGCCGATGCGGCCCT GCCCGCCGTGACATTCGAGCGGCCGAAGGCCGCCGCCCACGGCGACCTGGCATGCAACATCGCCATGCAGGTGGCGCGCG CGCTCAAGAGCAATCCGCGCGAACTGGCCCAGCGCATCGTGGCGATGGTGCAGGCCGATCCGCGCGCGGCCGAACTGGTC GCGGGCATGGAGATCGCCGGCCCGGGCTTCATCAACCTGCGCCTGACGCCGGCCGCCAAGGCGGACGTGTTGCGCGCGGT GCTGAGCGAGGGCGACGGCTACGGCGCCCAGGAGCGCGGCATGCACGGCAACGTGCTGGTCGAATTCGTCTCGGCCAACC CGACCGGCCCGCTGCACGTCGGCCATGGCCGTCAGGCGGCGCTCGGCGACGCGCTGGCCAATCTGCTGTCGTGGCAGGGC TATGACGTGCACCGCGAGTTCTACTACAACGACGCCGGCGTGCAGATCCAGAACCTGGCCGTGTCGGTGCAGGCGCGCAC GCGGGGCTTCAAGCCCGGCGATGCCAACTGGCCGGAAGCCGCCTACAACGGCGACTACATCGGCGACATCGCCGCCGACT TCCTGGCCGGCAAGACCGTGAGCGCGTCCGATGGCGAGCCGGTGACCGCGTCGGGCAACCCAGAGGATCTCGACTCGATC CGCAAATTCGCGGTGACCTACCTGCGCAACGAGCAGGACATCGACCTGCAGGCCTTCGGCGTCAAGTTCGACCACTACTA CCTGGAATCATCGCTGTACACCGACGGCCGCGTCGAAGCCGCGGTGCAGGGTCTGGTCGGCAAGGGCAAGACCTACGAGA GCGAAGGCGCGCTGTGGCTGCGCACCACCGACGACGGCGACGACAAGGACCGGGTCATGAAGAAGACCGACGGTACCTAC ACGTACTTCGTGCCGGACGTGGCCTACCACACCACCAAGTGGGAGCGCGGCTTCACCAAGGTCATTAACGTACAGGGCAG CGACCACCACGGCACCATCGCGCGCGTGCGCGCCGGGCTGCAGGGGCTCGACATCGGCATCCCCAAGGGCTACCCCGACT ACGTGCTGCACAAGATGGTCACCGTGATGAAGAACGGCGAGGAGGTGAAGATCTCCAAGCGTGCCGGCTCGTATGTGACC GTGCGCGACCTGATCGAGTGGTCAAACGGCGGCGATGAAACCATTCGCGGCTGCCTGGACGCAGGCGTGGCCGACTGGCC CGAGCACTTCACGCGCGGGCGCGATGCCGTGCGCTTCTTCCTGCTGTCGCGCAAGGCTGACACGGAGTTCGTGTTCGACG TGGACCTCGCGCTCAAGCAGAACGACGAGAACCCGGTGTACTACGTGCAGTACGCCCACGCGCGCATCTGCTCGATCTTC GAATCGTGGGGCGGCGCCGACTGGGAAAGCCGCCTGGCCGAACTGGCCGGCACCGACCTGGCCGCCGTCACCGGTGCCGA CGCGAGCCCGCAGGCACTGGCGCTGGGCCAGCGCCTGGCCGAGTTCCCCGAGATGCTGGCCGCCGCTGCGGGCGAACTGG CGCCGCACGCCGTTGCGTTCTACCTGCGCGACCTGGCCGGGGATTTCCACGCGTTCTACAACGCCGACCGCGTGCTGGTC GATGACGAAGCCGTCAAGCGTGCCCGCCTGGCACTGCTGGCCGCCACGCGCCAGGTGCTGCGCAATGGCCTGGCGGTGAT CGGCGTCTCGGCGCCGCGCCGCATGTAA
Upstream 100 bases:
>100_bases TTCGGCGTTCCGCACGTGCTCTCTGCCGGCCATTGCCGGTTTGGCTGCGCGGGCCGACGCACCGCCTGCCCGACTACCGC CCAACAGGGCCTCGACACCC
Downstream 100 bases:
>100_bases GTACGGAAGTCAAGGCACCGGCGTGCGATCGGGCCGGCTGGCGGGGCAGTGTTGCTCCGCAATGTGGCCGGCGCCGCCGC GGGCGGCGCTGGCACTATAA
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MLPVQTSNLAAAFTDAVRALAPADAALPAVTFERPKAAAHGDLACNIAMQVARALKSNPRELAQRIVAMVQADPRAAELV AGMEIAGPGFINLRLTPAAKADVLRAVLSEGDGYGAQERGMHGNVLVEFVSANPTGPLHVGHGRQAALGDALANLLSWQG YDVHREFYYNDAGVQIQNLAVSVQARTRGFKPGDANWPEAAYNGDYIGDIAADFLAGKTVSASDGEPVTASGNPEDLDSI RKFAVTYLRNEQDIDLQAFGVKFDHYYLESSLYTDGRVEAAVQGLVGKGKTYESEGALWLRTTDDGDDKDRVMKKTDGTY TYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKNGEEVKISKRAGSYVT VRDLIEWSNGGDETIRGCLDAGVADWPEHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIF ESWGGADWESRLAELAGTDLAAVTGADASPQALALGQRLAEFPEMLAAAAGELAPHAVAFYLRDLAGDFHAFYNADRVLV DDEAVKRARLALLAATRQVLRNGLAVIGVSAPRRM
Sequences:
>Translated_595_residues MLPVQTSNLAAAFTDAVRALAPADAALPAVTFERPKAAAHGDLACNIAMQVARALKSNPRELAQRIVAMVQADPRAAELV AGMEIAGPGFINLRLTPAAKADVLRAVLSEGDGYGAQERGMHGNVLVEFVSANPTGPLHVGHGRQAALGDALANLLSWQG YDVHREFYYNDAGVQIQNLAVSVQARTRGFKPGDANWPEAAYNGDYIGDIAADFLAGKTVSASDGEPVTASGNPEDLDSI RKFAVTYLRNEQDIDLQAFGVKFDHYYLESSLYTDGRVEAAVQGLVGKGKTYESEGALWLRTTDDGDDKDRVMKKTDGTY TYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKNGEEVKISKRAGSYVT VRDLIEWSNGGDETIRGCLDAGVADWPEHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIF ESWGGADWESRLAELAGTDLAAVTGADASPQALALGQRLAEFPEMLAAAAGELAPHAVAFYLRDLAGDFHAFYNADRVLV DDEAVKRARLALLAATRQVLRNGLAVIGVSAPRRM >Mature_595_residues MLPVQTSNLAAAFTDAVRALAPADAALPAVTFERPKAAAHGDLACNIAMQVARALKSNPRELAQRIVAMVQADPRAAELV AGMEIAGPGFINLRLTPAAKADVLRAVLSEGDGYGAQERGMHGNVLVEFVSANPTGPLHVGHGRQAALGDALANLLSWQG YDVHREFYYNDAGVQIQNLAVSVQARTRGFKPGDANWPEAAYNGDYIGDIAADFLAGKTVSASDGEPVTASGNPEDLDSI RKFAVTYLRNEQDIDLQAFGVKFDHYYLESSLYTDGRVEAAVQGLVGKGKTYESEGALWLRTTDDGDDKDRVMKKTDGTY TYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKNGEEVKISKRAGSYVT VRDLIEWSNGGDETIRGCLDAGVADWPEHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIF ESWGGADWESRLAELAGTDLAAVTGADASPQALALGQRLAEFPEMLAAAAGELAPHAVAFYLRDLAGDFHAFYNADRVLV DDEAVKRARLALLAATRQVLRNGLAVIGVSAPRRM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI15149476, Length=629, Percent_Identity=24.3243243243243, Blast_Score=116, Evalue=6e-26, Organism=Escherichia coli, GI1788184, Length=615, Percent_Identity=27.6422764227642, Blast_Score=144, Evalue=2e-35, Organism=Drosophila melanogaster, GI18859963, Length=622, Percent_Identity=23.1511254019293, Blast_Score=105, Evalue=7e-23,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 64495; Mature: 64495
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPVQTSNLAAAFTDAVRALAPADAALPAVTFERPKAAAHGDLACNIAMQVARALKSNPR CCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCHH ELAQRIVAMVQADPRAAELVAGMEIAGPGFINLRLTPAAKADVLRAVLSEGDGYGAQERG HHHHHHHHHHCCCCHHHHHHHCCEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHCC MHGNVLVEFVSANPTGPLHVGHGRQAALGDALANLLSWQGYDVHREFYYNDAGVQIQNLA CCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEHEEEECCCCCEEEEEE VSVQARTRGFKPGDANWPEAAYNGDYIGDIAADFLAGKTVSASDGEPVTASGNPEDLDSI EEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHH RKFAVTYLRNEQDIDLQAFGVKFDHYYLESSLYTDGRVEAAVQGLVGKGKTYESEGALWL HHHHHHHHCCCCCCCEEEEEEEEEHEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE RTTDDGDDKDRVMKKTDGTYTYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGL EECCCCCCHHHHHHHCCCEEEEEECCHHHHCCHHHCCCEEEEEECCCCCCCHHHHHHHCC QGLDIGIPKGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEWSNGGDETIRGCLD CCCEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHCCCCHHHHHHHHH AGVADWPEHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIF CCCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEEEHHHHHHHHH ESWGGADWESRLAELAGTDLAAVTGADASPQALALGQRLAEFPEMLAAAAGELAPHAVAF HHCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YLRDLAGDFHAFYNADRVLVDDEAVKRARLALLAATRQVLRNGLAVIGVSAPRRM HHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure MLPVQTSNLAAAFTDAVRALAPADAALPAVTFERPKAAAHGDLACNIAMQVARALKSNPR CCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCHH ELAQRIVAMVQADPRAAELVAGMEIAGPGFINLRLTPAAKADVLRAVLSEGDGYGAQERG HHHHHHHHHHCCCCHHHHHHHCCEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHCC MHGNVLVEFVSANPTGPLHVGHGRQAALGDALANLLSWQGYDVHREFYYNDAGVQIQNLA CCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEHEEEECCCCCEEEEEE VSVQARTRGFKPGDANWPEAAYNGDYIGDIAADFLAGKTVSASDGEPVTASGNPEDLDSI EEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHH RKFAVTYLRNEQDIDLQAFGVKFDHYYLESSLYTDGRVEAAVQGLVGKGKTYESEGALWL HHHHHHHHCCCCCCCEEEEEEEEEHEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE RTTDDGDDKDRVMKKTDGTYTYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGL EECCCCCCHHHHHHHCCCEEEEEECCHHHHCCHHHCCCEEEEEECCCCCCCHHHHHHHCC QGLDIGIPKGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEWSNGGDETIRGCLD CCCEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHCCCCHHHHHHHHH AGVADWPEHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIF CCCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEEEHHHHHHHHH ESWGGADWESRLAELAGTDLAAVTGADASPQALALGQRLAEFPEMLAAAAGELAPHAVAF HHCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YLRDLAGDFHAFYNADRVLVDDEAVKRARLALLAATRQVLRNGLAVIGVSAPRRM HHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA