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The map label for this gene is ybgL [C]

Identifier: 73539795

GI number: 73539795

Start: 108063

End: 108803

Strand: Direct

Name: ybgL [C]

Synonym: Reut_A0089

Alternate gene names: 73539795

Gene position: 108063-108803 (Clockwise)

Preceding gene: 73539794

Following gene: 73539796

Centisome position: 2.84

GC content: 67.21

Gene sequence:

>741_bases
ATGCAGATCGATTTGAACGCCGACCTTGGTGAAGGCTGCGGCAATGACGAGGCGCTGCTCGCGCTGATCAGTTCCGCCAA
CGTGGCGTGCGGCTGGCACGCCGGCGATGCCGCCACCATGCTGCAGACGGTGAAGTGGGCGATCGAAAAGGGCGTCGCGA
TCGGCGCGCACCCGAGCTTCCCGGACCGCGAGAACTTCGGCCGCACCGAGATGCAGCGCGACCCCGAAGCCGTCTACGCC
GATGTGCTGTATCAGATCGGCGCGCTTGCGGCGATGGTACGTGCGCAAGGCGGCCAACTGCACCACGTGAAGCCGCACGG
CGCTCTCTACAACCAGGCAGCGCGCGATCCCGCGCTGGCCGAGGCCATCGTGCGCGCCGTACGCGATTTCGATTCCGATC
TCATCTTCTTCGGCCTGGCCGGCAGCAAGATGATCGACGTGGCGCGCAAGGCCGGCCTGCGCGTCAAGGAAGAAGTCTTT
GCCGACCGCGGCTACAACGCCGACGGCTCGCTCGTCAAACGCGGCACGCCCGGCGCGCTGCACGAAGATGAGGAAGTCGC
CCTGAACCAGACGCTGACCATGGTGCGCGAGCAACGCGTGCGCGCCATCGACGGCAACTGGGTACCGATCCGCGCTGAAA
CCGTGTGCCTGCACGGCGACGGTGACCATGCGCTTGCCTTTGCGCGCCGCATCCGCGAGCGGCTCGGCGCCGAAGGCATT
GCAGTCCGCGCCGGCGCATAG

Upstream 100 bases:

>100_bases
GCGCCAGATTGACCAGGCCCTGCAATGGCAGGGAGATGGCATGACCATTGCCGCGCGCCGCCGCACCGGCTCGCGCGCCG
CAGCCTGAAGGAGAAACGCA

Downstream 100 bases:

>100_bases
GGCCACCAGCCCTGTGCGCGGCATGTCCCGCGGCTTTCGCCGTCGTGCCGTCTGACGGCTGAAGGCCGCACGCCTCCATC
ACACTCTCTCTGGTGTCTCT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MQIDLNADLGEGCGNDEALLALISSANVACGWHAGDAATMLQTVKWAIEKGVAIGAHPSFPDRENFGRTEMQRDPEAVYA
DVLYQIGALAAMVRAQGGQLHHVKPHGALYNQAARDPALAEAIVRAVRDFDSDLIFFGLAGSKMIDVARKAGLRVKEEVF
ADRGYNADGSLVKRGTPGALHEDEEVALNQTLTMVREQRVRAIDGNWVPIRAETVCLHGDGDHALAFARRIRERLGAEGI
AVRAGA

Sequences:

>Translated_246_residues
MQIDLNADLGEGCGNDEALLALISSANVACGWHAGDAATMLQTVKWAIEKGVAIGAHPSFPDRENFGRTEMQRDPEAVYA
DVLYQIGALAAMVRAQGGQLHHVKPHGALYNQAARDPALAEAIVRAVRDFDSDLIFFGLAGSKMIDVARKAGLRVKEEVF
ADRGYNADGSLVKRGTPGALHEDEEVALNQTLTMVREQRVRAIDGNWVPIRAETVCLHGDGDHALAFARRIRERLGAEGI
AVRAGA
>Mature_246_residues
MQIDLNADLGEGCGNDEALLALISSANVACGWHAGDAATMLQTVKWAIEKGVAIGAHPSFPDRENFGRTEMQRDPEAVYA
DVLYQIGALAAMVRAQGGQLHHVKPHGALYNQAARDPALAEAIVRAVRDFDSDLIFFGLAGSKMIDVARKAGLRVKEEVF
ADRGYNADGSLVKRGTPGALHEDEEVALNQTLTMVREQRVRAIDGNWVPIRAETVCLHGDGDHALAFARRIRERLGAEGI
AVRAGA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=63.9344262295082, Blast_Score=318, Evalue=3e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y089_CUPPJ (Q477G2)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_294315.1
- ProteinModelPortal:   Q477G2
- SMR:   Q477G2
- GeneID:   3611155
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A0089
- NMPDR:   fig|264198.3.peg.601
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- BioCyc:   REUT264198:REUT_A0089-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26475; Mature: 26475

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIDLNADLGEGCGNDEALLALISSANVACGWHAGDAATMLQTVKWAIEKGVAIGAHPSF
CEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCEECCCCCC
PDRENFGRTEMQRDPEAVYADVLYQIGALAAMVRAQGGQLHHVKPHGALYNQAARDPALA
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCHHHH
EAIVRAVRDFDSDLIFFGLAGSKMIDVARKAGLRVKEEVFADRGYNADGSLVKRGTPGAL
HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCC
HEDEEVALNQTLTMVREQRVRAIDGNWVPIRAETVCLHGDGDHALAFARRIRERLGAEGI
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCE
AVRAGA
EEECCC
>Mature Secondary Structure
MQIDLNADLGEGCGNDEALLALISSANVACGWHAGDAATMLQTVKWAIEKGVAIGAHPSF
CEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCEECCCCCC
PDRENFGRTEMQRDPEAVYADVLYQIGALAAMVRAQGGQLHHVKPHGALYNQAARDPALA
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCHHHH
EAIVRAVRDFDSDLIFFGLAGSKMIDVARKAGLRVKEEVFADRGYNADGSLVKRGTPGAL
HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCC
HEDEEVALNQTLTMVREQRVRAIDGNWVPIRAETVCLHGDGDHALAFARRIRERLGAEGI
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCE
AVRAGA
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA