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The map label for this gene is xerC [H]

Identifier: 73539788

GI number: 73539788

Start: 101670

End: 102689

Strand: Direct

Name: xerC [H]

Synonym: Reut_A0082

Alternate gene names: 73539788

Gene position: 101670-102689 (Clockwise)

Preceding gene: 73539787

Following gene: 73539790

Centisome position: 2.67

GC content: 68.14

Gene sequence:

>1020_bases
ATGCCTGCCGAACCGACGAACGGCGTGACAAACGACCCGATCGTCCAACGCTACCTCGCGTGGCTGGAAGGCAGCCGCAA
GCTGGCCGGCCACACGATCAGCAGCTATCGGCGTGACCTGACCGTGCTGCAGGCGCATGCGGCTAAGCATGCGCCCGGGA
TTGCATTACTTGCGCTGCAGACCCGCCATATCCGCGCCTTTGCCGCGCGCATGCATGGCGAAGGACTGGCCGGTACCAGC
ATTGCCCGGACCTTGTCGGCCTGGCGCGGCTTCTATCTGTGGGCCGCGCAGCACGGCCTGGGTGTCCAGGCCAATCCCGT
GGATGGCGTGCGCGCGCCGCGCTCCGGCCATCGGCTTCCCAAGGCGCTATCCGTCGAGCATGCCGTGGCGCTTGTGTCGC
ATCCGGCCGGCACGGATGCCGCCGCGCTGCGCGACCAGGCCGTCTGGGAACTGTTCTATTCGAGCGGATTGCGCCTGGCC
GAGCTGGTGCAGCTTGATGTGCGCTACGAAAGGCTCGATGGCTACGAATCGGCCGGCTGGCTCGACCTGTCCGGTGCCGA
ACTGACCGTGACGGGCAAGGGCTCGCGCCGGCGGACCGTGCCGGTCGGCAGCAAGGCGATGGAGGCGTTGCGCGCATGGC
TCGGCGTACGCGAGCAACTGCTGCGCCCCGGCGCCGCGCCGGAAGACGCCAGCGCGCTGTTCCTTGGCGCGCGCGGGCAT
CGGCTATCGATGCGCGTCGTGCAAATGCGGCTCAAGCAGCAGGCCATTCGTGCCGGCGTGCCCGCTGACGTGCATCCGCA
CATGCTGCGGCATTCGTTTGCCACGCACATGCTGCAGTCGTCAGGCGACCTGCGCGCGGTGCAGGAGCTGCTCGGGCATG
CGAGCATCGCCACGACGCAGATCTACACGTCGCTCGACTTCCAGCATCTGGCGAAAGTCTATGACAAGGCGCATCCGAGG
GCCGGGCGCGCGGCGCCGTCCAAGGACGGCTCGGACGATGACGAGACGTCGGGCGACTGA

Upstream 100 bases:

>100_bases
GCATGGGCACGGCTTACCTGACCCAGATCGGTGAAGTCGCCGGCGCGGCGCTGAACCGCCTGCGCGACTGATCGTTACTT
CCCGGTCCCGGATTGCAGCC

Downstream 100 bases:

>100_bases
ACCCTCAATCCGCCCACTGCGCCAGCACTTCCCGAAACCGGTCGATCTCCGGCAACAGCCACCCGCGGAACGCCTGCACC
TTTGCCAATTCGAGTGCCCC

Product: site-specific tyrosine recombinase XerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPAEPTNGVTNDPIVQRYLAWLEGSRKLAGHTISSYRRDLTVLQAHAAKHAPGIALLALQTRHIRAFAARMHGEGLAGTS
IARTLSAWRGFYLWAAQHGLGVQANPVDGVRAPRSGHRLPKALSVEHAVALVSHPAGTDAAALRDQAVWELFYSSGLRLA
ELVQLDVRYERLDGYESAGWLDLSGAELTVTGKGSRRRTVPVGSKAMEALRAWLGVREQLLRPGAAPEDASALFLGARGH
RLSMRVVQMRLKQQAIRAGVPADVHPHMLRHSFATHMLQSSGDLRAVQELLGHASIATTQIYTSLDFQHLAKVYDKAHPR
AGRAAPSKDGSDDDETSGD

Sequences:

>Translated_339_residues
MPAEPTNGVTNDPIVQRYLAWLEGSRKLAGHTISSYRRDLTVLQAHAAKHAPGIALLALQTRHIRAFAARMHGEGLAGTS
IARTLSAWRGFYLWAAQHGLGVQANPVDGVRAPRSGHRLPKALSVEHAVALVSHPAGTDAAALRDQAVWELFYSSGLRLA
ELVQLDVRYERLDGYESAGWLDLSGAELTVTGKGSRRRTVPVGSKAMEALRAWLGVREQLLRPGAAPEDASALFLGARGH
RLSMRVVQMRLKQQAIRAGVPADVHPHMLRHSFATHMLQSSGDLRAVQELLGHASIATTQIYTSLDFQHLAKVYDKAHPR
AGRAAPSKDGSDDDETSGD
>Mature_338_residues
PAEPTNGVTNDPIVQRYLAWLEGSRKLAGHTISSYRRDLTVLQAHAAKHAPGIALLALQTRHIRAFAARMHGEGLAGTSI
ARTLSAWRGFYLWAAQHGLGVQANPVDGVRAPRSGHRLPKALSVEHAVALVSHPAGTDAAALRDQAVWELFYSSGLRLAE
LVQLDVRYERLDGYESAGWLDLSGAELTVTGKGSRRRTVPVGSKAMEALRAWLGVREQLLRPGAAPEDASALFLGARGHR
LSMRVVQMRLKQQAIRAGVPADVHPHMLRHSFATHMLQSSGDLRAVQELLGHASIATTQIYTSLDFQHLAKVYDKAHPRA
GRAAPSKDGSDDDETSGD

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG4973

COG function: function code L; Site-specific recombinase XerC

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=309, Percent_Identity=43.6893203883495, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1789261, Length=302, Percent_Identity=33.4437086092715, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1790768, Length=178, Percent_Identity=29.7752808988764, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790767, Length=186, Percent_Identity=27.4193548387097, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 36755; Mature: 36624

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAEPTNGVTNDPIVQRYLAWLEGSRKLAGHTISSYRRDLTVLQAHAAKHAPGIALLALQ
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
TRHIRAFAARMHGEGLAGTSIARTLSAWRGFYLWAAQHGLGVQANPVDGVRAPRSGHRLP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
KALSVEHAVALVSHPAGTDAAALRDQAVWELFYSSGLRLAELVQLDVRYERLDGYESAGW
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCE
LDLSGAELTVTGKGSRRRTVPVGSKAMEALRAWLGVREQLLRPGAAPEDASALFLGARGH
EEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
RLSMRVVQMRLKQQAIRAGVPADVHPHMLRHSFATHMLQSSGDLRAVQELLGHASIATTQ
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
IYTSLDFQHLAKVYDKAHPRAGRAAPSKDGSDDDETSGD
HHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PAEPTNGVTNDPIVQRYLAWLEGSRKLAGHTISSYRRDLTVLQAHAAKHAPGIALLALQ
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
TRHIRAFAARMHGEGLAGTSIARTLSAWRGFYLWAAQHGLGVQANPVDGVRAPRSGHRLP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
KALSVEHAVALVSHPAGTDAAALRDQAVWELFYSSGLRLAELVQLDVRYERLDGYESAGW
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCE
LDLSGAELTVTGKGSRRRTVPVGSKAMEALRAWLGVREQLLRPGAAPEDASALFLGARGH
EEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
RLSMRVVQMRLKQQAIRAGVPADVHPHMLRHSFATHMLQSSGDLRAVQELLGHASIATTQ
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
IYTSLDFQHLAKVYDKAHPRAGRAAPSKDGSDDDETSGD
HHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA