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The map label for this gene is ybeQ [H]

Identifier: 73539772

GI number: 73539772

Start: 80160

End: 80909

Strand: Direct

Name: ybeQ [H]

Synonym: Reut_A0066

Alternate gene names: 73539772

Gene position: 80160-80909 (Clockwise)

Preceding gene: 73539771

Following gene: 73539773

Centisome position: 2.11

GC content: 69.2

Gene sequence:

>750_bases
ATGCCTCAAGCCCGCCCCCCGCTCTGGCCCGCCGCGGCAGCCGGCCTGGCCTGTCGCCGTCCGTTGGCCATCGCCACGCT
GGCCTTGGCGCTGGCGCTTTGTCCTGACCCGCTGATTCACGCGGCGCCTGCCCCCGCTCAGCCGGCCCAGGCGCAGACAC
GCGAGGCACTCGCCGCCTATGAGGCCGGCGCGTTCGATACCGCACTGCGCGGCTTCGCCGCCGCCGCACGGGAAGGCAAC
CGGCTGGCCCAGTTCAACTACGCGATGATGCTGCTGCGCGGCGAGGGCACGCCCGTCAAGCCGCAGGAAGCGCTGGTCTG
GCTGCGCAAGGCCGCTGACAACCAGATGACACATGCGCAGTTCACCTTTGGTGACCTGTACGAGCGCGGCGAGTTGGTGC
CGCGCTCGCTCGAAGAGGCCAACCGCTGGTATGAACGCGCCGCGCAGGGCGGCCACATTCAAGCGCAGGTGGCGCTGGCG
ACCAACTACTTCACCGGCCGCGGGGTGCCGCGAGACTATGCCAAGGCCTTCGAGTGGTACAACCGTGCCGCCGCGGCGGG
CGACGGTGGTGCACAGTACATCGTTGGCAGTTACTACGAACGCGGCGAGCCTGGCGTGGTCGGCAAGGACATCGAACAGG
CCAAGATCTGGTATGCGCGCTCGGCGGCGCATGGCGATCCGGGCGCGCTGGCCAAGCTGCGTTCGCTGCTGGAGGAATCC
GTACGCGCGAAGGCCGGCAGCTCGATGTAA

Upstream 100 bases:

>100_bases
TATTCGCGCGAATAATATTCGGGCTACCGCCTGCCTTCCGGGCCGAGCCGCCGCCTCCTACACTGGAATCAAGAAGGCGC
AGCGCATCTCGGAGTTCGTC

Downstream 100 bases:

>100_bases
GCGGCCGCGACAGGGTACAAGTCTTGCTTGAGACAGCGCGACAATCATCGCAGCAACCGCCTGGGAGGGCGCCGTGGCCA
TACATGTCGCACTGAATCAC

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MPQARPPLWPAAAAGLACRRPLAIATLALALALCPDPLIHAAPAPAQPAQAQTREALAAYEAGAFDTALRGFAAAAREGN
RLAQFNYAMMLLRGEGTPVKPQEALVWLRKAADNQMTHAQFTFGDLYERGELVPRSLEEANRWYERAAQGGHIQAQVALA
TNYFTGRGVPRDYAKAFEWYNRAAAAGDGGAQYIVGSYYERGEPGVVGKDIEQAKIWYARSAAHGDPGALAKLRSLLEES
VRAKAGSSM

Sequences:

>Translated_249_residues
MPQARPPLWPAAAAGLACRRPLAIATLALALALCPDPLIHAAPAPAQPAQAQTREALAAYEAGAFDTALRGFAAAAREGN
RLAQFNYAMMLLRGEGTPVKPQEALVWLRKAADNQMTHAQFTFGDLYERGELVPRSLEEANRWYERAAQGGHIQAQVALA
TNYFTGRGVPRDYAKAFEWYNRAAAAGDGGAQYIVGSYYERGEPGVVGKDIEQAKIWYARSAAHGDPGALAKLRSLLEES
VRAKAGSSM
>Mature_248_residues
PQARPPLWPAAAAGLACRRPLAIATLALALALCPDPLIHAAPAPAQPAQAQTREALAAYEAGAFDTALRGFAAAAREGNR
LAQFNYAMMLLRGEGTPVKPQEALVWLRKAADNQMTHAQFTFGDLYERGELVPRSLEEANRWYERAAQGGHIQAQVALAT
NYFTGRGVPRDYAKAFEWYNRAAAAGDGGAQYIVGSYYERGEPGVVGKDIEQAKIWYARSAAHGDPGALAKLRSLLEESV
RAKAGSSM

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=122, Percent_Identity=34.4262295081967, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI87081769, Length=173, Percent_Identity=34.6820809248555, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 26783; Mature: 26651

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQARPPLWPAAAAGLACRRPLAIATLALALALCPDPLIHAAPAPAQPAQAQTREALAAY
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHH
EAGAFDTALRGFAAAAREGNRLAQFNYAMMLLRGEGTPVKPQEALVWLRKAADNQMTHAQ
HCCHHHHHHHHHHHHHHCCCCEEHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHH
FTFGDLYERGELVPRSLEEANRWYERAAQGGHIQAQVALATNYFTGRGVPRDYAKAFEWY
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHH
NRAAAAGDGGAQYIVGSYYERGEPGVVGKDIEQAKIWYARSAAHGDPGALAKLRSLLEES
HHHHCCCCCCCHHHEHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VRAKAGSSM
HHHHCCCCC
>Mature Secondary Structure 
PQARPPLWPAAAAGLACRRPLAIATLALALALCPDPLIHAAPAPAQPAQAQTREALAAY
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHH
EAGAFDTALRGFAAAAREGNRLAQFNYAMMLLRGEGTPVKPQEALVWLRKAADNQMTHAQ
HCCHHHHHHHHHHHHHHCCCCEEHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHH
FTFGDLYERGELVPRSLEEANRWYERAAQGGHIQAQVALATNYFTGRGVPRDYAKAFEWY
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHH
NRAAAAGDGGAQYIVGSYYERGEPGVVGKDIEQAKIWYARSAAHGDPGALAKLRSLLEES
HHHHCCCCCCCHHHEHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VRAKAGSSM
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]