| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is dbpA [H]
Identifier: 73539745
GI number: 73539745
Start: 52533
End: 53957
Strand: Direct
Name: dbpA [H]
Synonym: Reut_A0039
Alternate gene names: 73539745
Gene position: 52533-53957 (Clockwise)
Preceding gene: 73539744
Following gene: 73539746
Centisome position: 1.38
GC content: 67.44
Gene sequence:
>1425_bases ATGAACACAAGCTCCCTGCCCCCGCAAGCCGGCGCTGCCGCGCCCGCCGCCGATTTCTCCACCCTGCCCCTGGCGCCGGC CACGCTCGCCACGCTGGCCCAGCTCGGCTATGACGAAATGACGCCGATCCAGGCCGCGAGCCTGCCGCTGACGCTCGCCG GCCACGACCTGATCGCGCAGGCCAAGACCGGCAGCGGCAAGACCGCTGCCTTCGCGCTGGCGCTGCTGCACAGGCTCGAT GCGCGCCGCTTCGACGTCCAGGCGATGGTGCTGTGCCCAACGCGCGAGCTGGCCGACCAGGTCACGCAGGAAATCCGCCG CCTCGCACGGGCCGAAGAGAACGTGAAGGTGCTGACGCTGTGCGGCGGCTCGCCGATGCGCCCGCAGGTGGACAGCCTGG TCCACGGCGCGCACGTCGTGGTGGGCACGCCGGGCCGCATCCTCGACCATATCGACCGGGGCAGCCTCGAACTGTCCGCG ATCAACACACTGGTGCTCGACGAAGCGGACCGCATGCTCGACATGGGCTTTTTCGACGACATCTCGTATGTGGCCAGCCG CTGCCCGCGCGAACGCCAGACGATGCTGTTTTCGGCCACGTATCCGGCGGGCATCGACAAGCTCAGCCAGAAGTTCCTGC GCAAGCCGCAGGAGGTGAAGCTGGCCGAGAAGCACGACAGCTCGAGCATCCGCCAGTATTTCTATGAAGTCGATGAGAGC GAGCGTCTCAGCGCCGTGGGCCGCCTGCTCGACCATTTCCGCCCGGCCAGCACGCTGGCCTTCTGCAATACCAAGGCGCG CTGCCGCGATCTGGTCGACCTGCTGCGCGGACAGGGCTTTCAGGCGCTGGCCTTGCACGGCGACCTGGAGCAGCGCGACC GCGATCAGGTGCTCGTGCAGTTCGCCAACGGCAGCTGCTCGGTGCTGGTAGCGACGGACGTGGCCGCGCGCGGGCTGGAT ATCGCCCAGCTCGAAGCCGTGATCAACGTGGAAATCACGCCCGACCCCGAAGTGCATATCCACCGCATCGGCCGCACTGG CCGCGCCGGCGAGGAAGGCCACGCGTTCAGCCTGGTCAGCATGGACGAGATGGGGCGCGTAGGCAACCTGGAGCAGCACC ACGGCGGCGAATTCGAATGGCACCCGCTGGCCGAACTGCGCGCCGCGAGCACCGAGCGCCTGCTGCCGCCGATGGTCACG CTGCAGATGCTGGGCGGCCGCAAGGAAAAGATCCGGCCCGGCGATATCCTCGGTGCGCTGACCGGCGAGGCCGGCTTCAC CAAGGAACAGATCGGCAAGATCAATGTGATGGAGATGTCGACCTACATCGCGGTGGATCGCGCCATCGGGCGAGAAGCGG TGCGCCGGTTGAACGCGGGGAAGGTGAAGGGCAAGAAGGTGAAGGTGAGGATGCTGACCGAGTGA
Upstream 100 bases:
>100_bases CCAGGAACAGGTACCGGCGAAGGTGTCGGCGAAGGTTCCGGCAAAGAAGCGTGCCTGATATTCCGGCCGGCCCATTGACC CCTCGTTGCTACAATCCGGC
Downstream 100 bases:
>100_bases GCCGCGTTCGCGTCTGGGCCACCGCATAGTTTCTCGCAGATCTGACTTCACGAAGATTCGTGTAAGTCACCCTGTAAGGC CGCCCGATCCTTTGCTAATC
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MNTSSLPPQAGAAAPAADFSTLPLAPATLATLAQLGYDEMTPIQAASLPLTLAGHDLIAQAKTGSGKTAAFALALLHRLD ARRFDVQAMVLCPTRELADQVTQEIRRLARAEENVKVLTLCGGSPMRPQVDSLVHGAHVVVGTPGRILDHIDRGSLELSA INTLVLDEADRMLDMGFFDDISYVASRCPRERQTMLFSATYPAGIDKLSQKFLRKPQEVKLAEKHDSSSIRQYFYEVDES ERLSAVGRLLDHFRPASTLAFCNTKARCRDLVDLLRGQGFQALALHGDLEQRDRDQVLVQFANGSCSVLVATDVAARGLD IAQLEAVINVEITPDPEVHIHRIGRTGRAGEEGHAFSLVSMDEMGRVGNLEQHHGGEFEWHPLAELRAASTERLLPPMVT LQMLGGRKEKIRPGDILGALTGEAGFTKEQIGKINVMEMSTYIAVDRAIGREAVRRLNAGKVKGKKVKVRMLTE
Sequences:
>Translated_474_residues MNTSSLPPQAGAAAPAADFSTLPLAPATLATLAQLGYDEMTPIQAASLPLTLAGHDLIAQAKTGSGKTAAFALALLHRLD ARRFDVQAMVLCPTRELADQVTQEIRRLARAEENVKVLTLCGGSPMRPQVDSLVHGAHVVVGTPGRILDHIDRGSLELSA INTLVLDEADRMLDMGFFDDISYVASRCPRERQTMLFSATYPAGIDKLSQKFLRKPQEVKLAEKHDSSSIRQYFYEVDES ERLSAVGRLLDHFRPASTLAFCNTKARCRDLVDLLRGQGFQALALHGDLEQRDRDQVLVQFANGSCSVLVATDVAARGLD IAQLEAVINVEITPDPEVHIHRIGRTGRAGEEGHAFSLVSMDEMGRVGNLEQHHGGEFEWHPLAELRAASTERLLPPMVT LQMLGGRKEKIRPGDILGALTGEAGFTKEQIGKINVMEMSTYIAVDRAIGREAVRRLNAGKVKGKKVKVRMLTE >Mature_474_residues MNTSSLPPQAGAAAPAADFSTLPLAPATLATLAQLGYDEMTPIQAASLPLTLAGHDLIAQAKTGSGKTAAFALALLHRLD ARRFDVQAMVLCPTRELADQVTQEIRRLARAEENVKVLTLCGGSPMRPQVDSLVHGAHVVVGTPGRILDHIDRGSLELSA INTLVLDEADRMLDMGFFDDISYVASRCPRERQTMLFSATYPAGIDKLSQKFLRKPQEVKLAEKHDSSSIRQYFYEVDES ERLSAVGRLLDHFRPASTLAFCNTKARCRDLVDLLRGQGFQALALHGDLEQRDRDQVLVQFANGSCSVLVATDVAARGLD IAQLEAVINVEITPDPEVHIHRIGRTGRAGEEGHAFSLVSMDEMGRVGNLEQHHGGEFEWHPLAELRAASTERLLPPMVT LQMLGGRKEKIRPGDILGALTGEAGFTKEQIGKINVMEMSTYIAVDRAIGREAVRRLNAGKVKGKKVKVRMLTE
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI164664518, Length=387, Percent_Identity=33.3333333333333, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI45446747, Length=451, Percent_Identity=34.589800443459, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI45446743, Length=451, Percent_Identity=34.589800443459, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI7661920, Length=369, Percent_Identity=35.5013550135501, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI41327773, Length=371, Percent_Identity=35.3099730458221, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=34.4262295081967, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI262118318, Length=372, Percent_Identity=36.5591397849462, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI262231852, Length=372, Percent_Identity=36.5591397849462, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI216548263, Length=372, Percent_Identity=36.5591397849462, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI13518015, Length=372, Percent_Identity=36.5591397849462, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI148613856, Length=346, Percent_Identity=36.4161849710983, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI38201710, Length=346, Percent_Identity=36.4161849710983, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI50659095, Length=378, Percent_Identity=35.978835978836, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI20149629, Length=351, Percent_Identity=35.3276353276353, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI13129006, Length=380, Percent_Identity=35.2631578947368, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI87196351, Length=366, Percent_Identity=37.7049180327869, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=37.7049180327869, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=37.7049180327869, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI31542656, Length=376, Percent_Identity=35.3723404255319, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI169881239, Length=387, Percent_Identity=36.4341085271318, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI13514809, Length=387, Percent_Identity=36.4341085271318, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI224593278, Length=353, Percent_Identity=38.2436260623229, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=32.9608938547486, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI4758112, Length=376, Percent_Identity=32.4468085106383, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI18375623, Length=376, Percent_Identity=32.4468085106383, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI41327771, Length=394, Percent_Identity=32.2335025380711, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI188035877, Length=355, Percent_Identity=33.2394366197183, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI21071032, Length=364, Percent_Identity=34.6153846153846, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=33.9622641509434, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI256223453, Length=350, Percent_Identity=32.2857142857143, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI51094101, Length=351, Percent_Identity=34.1880341880342, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI164419743, Length=351, Percent_Identity=34.1880341880342, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI222352149, Length=349, Percent_Identity=34.3839541547278, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI13514831, Length=368, Percent_Identity=34.5108695652174, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI164419732, Length=357, Percent_Identity=31.9327731092437, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38327634, Length=400, Percent_Identity=31.25, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI8922886, Length=375, Percent_Identity=33.0666666666667, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI6005743, Length=375, Percent_Identity=33.0666666666667, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI55749865, Length=354, Percent_Identity=30.225988700565, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI62241022, Length=359, Percent_Identity=33.1476323119777, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI41327779, Length=407, Percent_Identity=30.2211302211302, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI41327776, Length=350, Percent_Identity=32, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI9506931, Length=402, Percent_Identity=32.089552238806, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI62241024, Length=337, Percent_Identity=32.9376854599407, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI17505907, Length=423, Percent_Identity=29.5508274231678, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=30.6547619047619, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI38569503, Length=367, Percent_Identity=27.5204359673025, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI38569505, Length=385, Percent_Identity=27.2727272727273, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=33.1168831168831, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI256773275, Length=381, Percent_Identity=30.1837270341207, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI154759257, Length=438, Percent_Identity=27.1689497716895, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI20336298, Length=224, Percent_Identity=34.375, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1787605, Length=456, Percent_Identity=52.6315789473684, Blast_Score=456, Evalue=1e-129, Organism=Escherichia coli, GI87082221, Length=355, Percent_Identity=40.8450704225352, Blast_Score=267, Evalue=1e-72, Organism=Escherichia coli, GI1787016, Length=361, Percent_Identity=40.9972299168975, Blast_Score=265, Evalue=4e-72, Organism=Escherichia coli, GI1790214, Length=350, Percent_Identity=37.1428571428571, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1788930, Length=347, Percent_Identity=37.1757925072046, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI48994977, Length=458, Percent_Identity=24.235807860262, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=36.3143631436314, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=36.3143631436314, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71987143, Length=368, Percent_Identity=35.5978260869565, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17552114, Length=357, Percent_Identity=33.0532212885154, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI115533224, Length=373, Percent_Identity=36.9973190348526, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17510307, Length=381, Percent_Identity=37.7952755905512, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI17510309, Length=381, Percent_Identity=37.7952755905512, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71995514, Length=381, Percent_Identity=37.7952755905512, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71995718, Length=370, Percent_Identity=39.4594594594595, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17552642, Length=365, Percent_Identity=35.3424657534247, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17555296, Length=369, Percent_Identity=34.1463414634146, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI86570094, Length=342, Percent_Identity=38.5964912280702, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17510559, Length=377, Percent_Identity=36.604774535809, Blast_Score=211, Evalue=7e-55, Organism=Caenorhabditis elegans, GI17507877, Length=376, Percent_Identity=36.1702127659575, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=36.0215053763441, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI32565321, Length=394, Percent_Identity=32.48730964467, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=31.4447592067989, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI193206561, Length=343, Percent_Identity=31.7784256559767, Blast_Score=198, Evalue=7e-51, Organism=Caenorhabditis elegans, GI71999646, Length=359, Percent_Identity=32.5905292479109, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=32.5905292479109, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=33.7662337662338, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=33.7662337662338, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI115532546, Length=372, Percent_Identity=32.5268817204301, Blast_Score=191, Evalue=5e-49, Organism=Caenorhabditis elegans, GI115532548, Length=372, Percent_Identity=32.5268817204301, Blast_Score=191, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17536103, Length=385, Percent_Identity=33.7662337662338, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17537549, Length=367, Percent_Identity=32.425068119891, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17509811, Length=366, Percent_Identity=31.9672131147541, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17507881, Length=377, Percent_Identity=32.8912466843501, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17507945, Length=384, Percent_Identity=34.375, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17505370, Length=374, Percent_Identity=31.8181818181818, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17553716, Length=365, Percent_Identity=28.7671232876712, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17556951, Length=394, Percent_Identity=27.6649746192893, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI193208216, Length=378, Percent_Identity=30.952380952381, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=27.5401069518717, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=31.413612565445, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=25.1231527093596, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17507641, Length=389, Percent_Identity=30.3341902313625, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=32.1951219512195, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=30.188679245283, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=28.0966767371601, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI71997889, Length=368, Percent_Identity=26.6304347826087, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25148205, Length=331, Percent_Identity=24.773413897281, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=37.8640776699029, Blast_Score=87, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324217, Length=361, Percent_Identity=35.7340720221607, Blast_Score=236, Evalue=7e-63, Organism=Saccharomyces cerevisiae, GI6320224, Length=380, Percent_Identity=34.2105263157895, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=38.5674931129477, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=359, Percent_Identity=32.8690807799443, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=37.5, Blast_Score=226, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6324778, Length=378, Percent_Identity=36.5079365079365, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6321360, Length=372, Percent_Identity=36.5591397849462, Blast_Score=213, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6323021, Length=355, Percent_Identity=36.9014084507042, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=368, Percent_Identity=34.7826086956522, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6322323, Length=368, Percent_Identity=34.7826086956522, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=31.0541310541311, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=369, Percent_Identity=32.2493224932249, Blast_Score=192, Evalue=8e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=385, Percent_Identity=31.9480519480519, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6320173, Length=425, Percent_Identity=30.3529411764706, Blast_Score=186, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=31.5789473684211, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6320449, Length=377, Percent_Identity=30.7692307692308, Blast_Score=180, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6321963, Length=370, Percent_Identity=33.2432432432432, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=398, Percent_Identity=27.6381909547739, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=389, Percent_Identity=28.5347043701799, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=415, Percent_Identity=30.1204819277108, Blast_Score=166, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=397, Percent_Identity=27.2040302267003, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=28.3018867924528, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=25.5924170616114, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=465, Percent_Identity=25.5913978494624, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6324366, Length=346, Percent_Identity=24.8554913294798, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6321374, Length=377, Percent_Identity=23.342175066313, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=35.5013550135501, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24584399, Length=364, Percent_Identity=38.1868131868132, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI28574962, Length=368, Percent_Identity=36.4130434782609, Blast_Score=228, Evalue=9e-60, Organism=Drosophila melanogaster, GI24583281, Length=365, Percent_Identity=31.5068493150685, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24583279, Length=365, Percent_Identity=31.5068493150685, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24662330, Length=371, Percent_Identity=35.3099730458221, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24644487, Length=361, Percent_Identity=37.1191135734072, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI45551833, Length=361, Percent_Identity=37.1191135734072, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644485, Length=361, Percent_Identity=37.1191135734072, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644483, Length=361, Percent_Identity=37.1191135734072, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI281361218, Length=361, Percent_Identity=37.1191135734072, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644481, Length=361, Percent_Identity=37.1191135734072, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644479, Length=361, Percent_Identity=37.1191135734072, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI18857967, Length=368, Percent_Identity=34.2391304347826, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=35.5113636363636, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24582080, Length=370, Percent_Identity=36.4864864864865, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24582078, Length=370, Percent_Identity=36.4864864864865, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI17136248, Length=370, Percent_Identity=36.4864864864865, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24582075, Length=370, Percent_Identity=36.4864864864865, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24642151, Length=370, Percent_Identity=32.4324324324324, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24585582, Length=372, Percent_Identity=34.4086021505376, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI17985987, Length=369, Percent_Identity=36.5853658536585, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=33.9673913043478, Blast_Score=201, Evalue=8e-52, Organism=Drosophila melanogaster, GI21356161, Length=354, Percent_Identity=37.5706214689266, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI17977678, Length=364, Percent_Identity=33.7912087912088, Blast_Score=199, Evalue=5e-51, Organism=Drosophila melanogaster, GI28571808, Length=378, Percent_Identity=31.7460317460317, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI28571809, Length=378, Percent_Identity=31.7460317460317, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24584994, Length=393, Percent_Identity=31.2977099236641, Blast_Score=194, Evalue=7e-50, Organism=Drosophila melanogaster, GI17136814, Length=378, Percent_Identity=34.3915343915344, Blast_Score=194, Evalue=7e-50, Organism=Drosophila melanogaster, GI24581954, Length=359, Percent_Identity=32.3119777158774, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24581952, Length=359, Percent_Identity=32.3119777158774, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24581956, Length=359, Percent_Identity=32.3119777158774, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=36.7088607594937, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI21355559, Length=369, Percent_Identity=34.6883468834688, Blast_Score=168, Evalue=7e-42, Organism=Drosophila melanogaster, GI17647335, Length=352, Percent_Identity=29.8295454545455, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI24666101, Length=374, Percent_Identity=31.0160427807487, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24643725, Length=398, Percent_Identity=29.6482412060301, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI24642822, Length=372, Percent_Identity=28.2258064516129, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=31.5950920245399, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI19920478, Length=359, Percent_Identity=29.5264623955432, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI17136666, Length=437, Percent_Identity=27.2311212814645, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI18859659, Length=234, Percent_Identity=30.3418803418803, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI28571338, Length=234, Percent_Identity=30.3418803418803, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI20130173, Length=301, Percent_Identity=29.5681063122924, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI24640164, Length=353, Percent_Identity=24.3626062322946, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 51733; Mature: 51733
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSSLPPQAGAAAPAADFSTLPLAPATLATLAQLGYDEMTPIQAASLPLTLAGHDLIAQ CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHEEE AKTGSGKTAAFALALLHRLDARRFDVQAMVLCPTRELADQVTQEIRRLARAEENVKVLTL CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEE CGGSPMRPQVDSLVHGAHVVVGTPGRILDHIDRGSLELSAINTLVLDEADRMLDMGFFDD ECCCCCCCHHHHHHCCCEEEEECCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHH ISYVASRCPRERQTMLFSATYPAGIDKLSQKFLRKPQEVKLAEKHDSSSIRQYFYEVDES HHHHHHHCCCCHHEEEEEECCCCCHHHHHHHHHCCCHHEEHHHHCCHHHHHHHHHHCCCH ERLSAVGRLLDHFRPASTLAFCNTKARCRDLVDLLRGQGFQALALHGDLEQRDRDQVLVQ HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCEEEEE FANGSCSVLVATDVAARGLDIAQLEAVINVEITPDPEVHIHRIGRTGRAGEEGHAFSLVS ECCCCEEEEEEECHHHCCCCHHHEEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEE MDEMGRVGNLEQHHGGEFEWHPLAELRAASTERLLPPMVTLQMLGGRKEKIRPGDILGAL HHHCCCCCCCHHHCCCCCCCCCHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCEEEEE TGEAGFTKEQIGKINVMEMSTYIAVDRAIGREAVRRLNAGKVKGKKVKVRMLTE CCCCCCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure MNTSSLPPQAGAAAPAADFSTLPLAPATLATLAQLGYDEMTPIQAASLPLTLAGHDLIAQ CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHEEE AKTGSGKTAAFALALLHRLDARRFDVQAMVLCPTRELADQVTQEIRRLARAEENVKVLTL CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEE CGGSPMRPQVDSLVHGAHVVVGTPGRILDHIDRGSLELSAINTLVLDEADRMLDMGFFDD ECCCCCCCHHHHHHCCCEEEEECCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHH ISYVASRCPRERQTMLFSATYPAGIDKLSQKFLRKPQEVKLAEKHDSSSIRQYFYEVDES HHHHHHHCCCCHHEEEEEECCCCCHHHHHHHHHCCCHHEEHHHHCCHHHHHHHHHHCCCH ERLSAVGRLLDHFRPASTLAFCNTKARCRDLVDLLRGQGFQALALHGDLEQRDRDQVLVQ HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCEEEEE FANGSCSVLVATDVAARGLDIAQLEAVINVEITPDPEVHIHRIGRTGRAGEEGHAFSLVS ECCCCEEEEEEECHHHCCCCHHHEEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEE MDEMGRVGNLEQHHGGEFEWHPLAELRAASTERLLPPMVTLQMLGGRKEKIRPGDILGAL HHHCCCCCCCHHHCCCCCCCCCHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCEEEEE TGEAGFTKEQIGKINVMEMSTYIAVDRAIGREAVRRLNAGKVKGKKVKVRMLTE CCCCCCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]