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The map label for this gene is nahR [H]

Identifier: 73539740

GI number: 73539740

Start: 46205

End: 47152

Strand: Direct

Name: nahR [H]

Synonym: Reut_A0034

Alternate gene names: 73539740

Gene position: 46205-47152 (Clockwise)

Preceding gene: 73539735

Following gene: 73539741

Centisome position: 1.21

GC content: 65.19

Gene sequence:

>948_bases
ATGATCCGCGCCGACGACCCCTTCGACACCTACCTGCTGCGCGTGTTGTGCATCCTGATTGCCGAACAGAGCGTGTCGCG
CACGGCCATCCGTCTGAACCAGTCGCAGCCGGCGATCAGCTCGGCGCTCAAGCGGCTGCGCGCCATCTTCAACGACCCGC
TGCTCACGCGCGAGAAGAATGTGATGGTGCCGACCGAGCGCGCATTGCAGCTCGCGCGCAACGCACAGGCTGCACTTAGC
GCGCTCGACAACCTGCTGGTGTCGGACGACCGCTTCGATCCCGCCACGACCGAACAGAGTTTTACCGTGGCGATGCCGGA
CTACCTGGCGCCGCCGTTCTTCGCGCACGTGGTGCGCGAGTTCCGCCGCGCGGCGCCGCATGCACGGTTGTCGGCCGTAC
CCTTGAGCGCAACGTTCGACTATGAACAGGCCTTGTCGGAAGGCGCCGCGGATATCGTCATCGGCAACTGGCCCAACCCG
CCGGAACACCTGCACCTGTCGGTATTGCTCGAGGACGAAGTGGTCTGCGTGGTCGCGCCGGACAGCGTGCACAACCAGCC
CGGCAAGTTCACGCCGCAGGCTTATCTCGGCGCAGCGCATATCGTGCCCACGCCCTATTCACGCGACCAGCGCGGGCTCG
TCGATTCGGGACTCAGCACGATGCGCGTGCATCGGGACAACCGCGTGAGTTGCCCGTACTTCAACCTCGCGCCGAGCCTG
ATCCCCGGCACCGACCTGATCCTGACTACGGGCCGCCACTTTGCCAACTATCACGCACAACACGTGCCGCTGGCGGTGCT
GAGGCCGCCGATCGAATTCCCCTTCATGCGCTTCTATCAGCTCTGGCATCCGTCGCGCCACCGCTCGGCTGCGCATATGT
GGCTGCGGGGCATGCTGACGGCAGCCTCGCAGGAATTGCGGGATCTGCGCGACATGCAGCGAACGTAG

Upstream 100 bases:

>100_bases
CGGTGCGCGACACGCTACAAAGTCGGCATTGGCGAACACCGTGGCGCGGCAATTGCGTCGCCCGCTGCGCCCGGCCGCCA
TCCTCGCTCAGGACTTCACC

Downstream 100 bases:

>100_bases
CGCGTGCGGCAATATCGGATTCTGTTATGCGACCTATAGGGCAGCGGGCCTCGCCGCTGCCGTGGGTGCTTCCTATACTC
GGCCCGTATTCGACGTTCAC

Product: regulatory protein, LysR:LysR, substrate-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MIRADDPFDTYLLRVLCILIAEQSVSRTAIRLNQSQPAISSALKRLRAIFNDPLLTREKNVMVPTERALQLARNAQAALS
ALDNLLVSDDRFDPATTEQSFTVAMPDYLAPPFFAHVVREFRRAAPHARLSAVPLSATFDYEQALSEGAADIVIGNWPNP
PEHLHLSVLLEDEVVCVVAPDSVHNQPGKFTPQAYLGAAHIVPTPYSRDQRGLVDSGLSTMRVHRDNRVSCPYFNLAPSL
IPGTDLILTTGRHFANYHAQHVPLAVLRPPIEFPFMRFYQLWHPSRHRSAAHMWLRGMLTAASQELRDLRDMQRT

Sequences:

>Translated_315_residues
MIRADDPFDTYLLRVLCILIAEQSVSRTAIRLNQSQPAISSALKRLRAIFNDPLLTREKNVMVPTERALQLARNAQAALS
ALDNLLVSDDRFDPATTEQSFTVAMPDYLAPPFFAHVVREFRRAAPHARLSAVPLSATFDYEQALSEGAADIVIGNWPNP
PEHLHLSVLLEDEVVCVVAPDSVHNQPGKFTPQAYLGAAHIVPTPYSRDQRGLVDSGLSTMRVHRDNRVSCPYFNLAPSL
IPGTDLILTTGRHFANYHAQHVPLAVLRPPIEFPFMRFYQLWHPSRHRSAAHMWLRGMLTAASQELRDLRDMQRT
>Mature_315_residues
MIRADDPFDTYLLRVLCILIAEQSVSRTAIRLNQSQPAISSALKRLRAIFNDPLLTREKNVMVPTERALQLARNAQAALS
ALDNLLVSDDRFDPATTEQSFTVAMPDYLAPPFFAHVVREFRRAAPHARLSAVPLSATFDYEQALSEGAADIVIGNWPNP
PEHLHLSVLLEDEVVCVVAPDSVHNQPGKFTPQAYLGAAHIVPTPYSRDQRGLVDSGLSTMRVHRDNRVSCPYFNLAPSL
IPGTDLILTTGRHFANYHAQHVPLAVLRPPIEFPFMRFYQLWHPSRHRSAAHMWLRGMLTAASQELRDLRDMQRT

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=299, Percent_Identity=26.4214046822742, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35397; Mature: 35397

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRADDPFDTYLLRVLCILIAEQSVSRTAIRLNQSQPAISSALKRLRAIFNDPLLTREKN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
VMVPTERALQLARNAQAALSALDNLLVSDDRFDPATTEQSFTVAMPDYLAPPFFAHVVRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHCCHHHHHHHHH
FRRAAPHARLSAVPLSATFDYEQALSEGAADIVIGNWPNPPEHLHLSVLLEDEVVCVVAP
HHHHCCCCCEEEECCCCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEEEECCEEEEECC
DSVHNQPGKFTPQAYLGAAHIVPTPYSRDQRGLVDSGLSTMRVHRDNRVSCPYFNLAPSL
CCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCHHHCCCHHEEEECCCCCCCCCCCCCCCC
IPGTDLILTTGRHFANYHAQHVPLAVLRPPIEFPFMRFYQLWHPSRHRSAAHMWLRGMLT
CCCCCEEEECCCHHHHCCHHHCCHHEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
AASQELRDLRDMQRT
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRADDPFDTYLLRVLCILIAEQSVSRTAIRLNQSQPAISSALKRLRAIFNDPLLTREKN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
VMVPTERALQLARNAQAALSALDNLLVSDDRFDPATTEQSFTVAMPDYLAPPFFAHVVRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHCCHHHHHHHHH
FRRAAPHARLSAVPLSATFDYEQALSEGAADIVIGNWPNPPEHLHLSVLLEDEVVCVVAP
HHHHCCCCCEEEECCCCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEEEECCEEEEECC
DSVHNQPGKFTPQAYLGAAHIVPTPYSRDQRGLVDSGLSTMRVHRDNRVSCPYFNLAPSL
CCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCHHHCCCHHEEEECCCCCCCCCCCCCCCC
IPGTDLILTTGRHFANYHAQHVPLAVLRPPIEFPFMRFYQLWHPSRHRSAAHMWLRGMLT
CCCCCEEEECCCHHHHCCHHHCCHHEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
AASQELRDLRDMQRT
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]