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The map label for this gene is yjgH [H]

Identifier: 73539535

GI number: 73539535

Start: 2542365

End: 2542763

Strand: Direct

Name: yjgH [H]

Synonym: Reut_B5714

Alternate gene names: 73539535

Gene position: 2542365-2542763 (Clockwise)

Preceding gene: 73539534

Following gene: 73539536

Centisome position: 93.26

GC content: 62.91

Gene sequence:

>399_bases
ATGATTAACCCCGCGCCATTCAAGGAGCGGCATTACGACCAACTGCATTTCTCGTCCGCCACCCGTGTCGGCGACATGAT
CTGGGTGTCGGGTCAGGTGGGCCTTGATGTGGCCACTGGCAAGCCGGGCGAGGGCATGGCCGAGCAGGCTCGACTGGCCT
TCAACAACCTGAAGTGCGTGCTGGAGGAGGCGGGTGCGACGATGGCGGACATCGTCGAGATCGTGACTTTCCACATCGAC
CTGCATGGCCCGGACATTCAAGCGTTCGTGAGGGCGAAGGACGAGTTCCTGCCTGAGCGCTACCCCTCCTGGACTGCGGT
AGGCGTGACCCAACTGGCGAATCCGGCGTTTCTTGTCGAAGTTCGCGCCGTCGCGGTGGCCGGCTGCGGTGCCGATTGA

Upstream 100 bases:

>100_bases
TGGCCAAGCTCAATCAGGGCGATGCGTTCCGCTCGCCGGTCTTCCGCCAGGTTGCCGGGGTCTGATATCACTACGGAGTA
CCAACATCGTGAAGCGAAAA

Downstream 100 bases:

>100_bases
CTGGGGAGGCTCACATGCAGGTGACTGAACAAATGAAGCTGGACCTGGCACGGGACGGCGCCTTCGTTGCACGAGGCTTG
TTTTCTCCTGAAGGGCTCAA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MINPAPFKERHYDQLHFSSATRVGDMIWVSGQVGLDVATGKPGEGMAEQARLAFNNLKCVLEEAGATMADIVEIVTFHID
LHGPDIQAFVRAKDEFLPERYPSWTAVGVTQLANPAFLVEVRAVAVAGCGAD

Sequences:

>Translated_132_residues
MINPAPFKERHYDQLHFSSATRVGDMIWVSGQVGLDVATGKPGEGMAEQARLAFNNLKCVLEEAGATMADIVEIVTFHID
LHGPDIQAFVRAKDEFLPERYPSWTAVGVTQLANPAFLVEVRAVAVAGCGAD
>Mature_132_residues
MINPAPFKERHYDQLHFSSATRVGDMIWVSGQVGLDVATGKPGEGMAEQARLAFNNLKCVLEEAGATMADIVEIVTFHID
LHGPDIQAFVRAKDEFLPERYPSWTAVGVTQLANPAFLVEVRAVAVAGCGAD

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=119, Percent_Identity=41.1764705882353, Blast_Score=80, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14283; Mature: 14283

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINPAPFKERHYDQLHFSSATRVGDMIWVSGQVGLDVATGKPGEGMAEQARLAFNNLKCV
CCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
LEEAGATMADIVEIVTFHIDLHGPDIQAFVRAKDEFLPERYPSWTAVGVTQLANPAFLVE
HHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCEEEEE
VRAVAVAGCGAD
EEEHEEECCCCC
>Mature Secondary Structure
MINPAPFKERHYDQLHFSSATRVGDMIWVSGQVGLDVATGKPGEGMAEQARLAFNNLKCV
CCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
LEEAGATMADIVEIVTFHIDLHGPDIQAFVRAKDEFLPERYPSWTAVGVTQLANPAFLVE
HHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCEEEEE
VRAVAVAGCGAD
EEEHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]