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The map label for this gene is flgD [H]

Identifier: 73539449

GI number: 73539449

Start: 2445894

End: 2446574

Strand: Direct

Name: flgD [H]

Synonym: Reut_B5627

Alternate gene names: 73539449

Gene position: 2445894-2446574 (Clockwise)

Preceding gene: 73539448

Following gene: 73539450

Centisome position: 89.72

GC content: 63.73

Gene sequence:

>681_bases
ATGACTACTACCTCCTCGGTCAACAACAGCAGCAGCGCCAGCAGCACCACGAACGTCAATGCGGCGCTCCAGAGCGGCAG
CGCCAGCGCCGCCGATCTGCAGAGCAACTTCCTGAAGATGCTCGTGACGCAGATGAACAACCAGGATCCGCTCAACCCGA
TGGACAACGCGCAGCTGACTTCGCAGCTCGCGCAGATTTCCACGGTCAGCAGCATGCAGACCATGAACTCCACGCTGACC
CAGCTGCTGAACCAGACGAGCGCAAGCCGCGCCATGGATTCGGCTGCGCTGATCGGCCGTACGGTGATGGTGCCGGGTTC
GCAGTTCTCGGTGAAGGACGGCGTGGCCGGCCAGTTCGGCGTGGACCTGCCGTCGACGGCCGATGCGGTGACCGTCAACG
TGCTCGATGCCCACGGCAACGTAGTGCGCACCATCGACATGAAGGGCCAGACGGCCGGCGTGCACGACATCGCCTGGGAC
GGCAAGAACGATGCCGGGGTGGCGGTTGCAGACGGCGATTACAGCTTCAAGGTCAGCGCCACGGCCAATGGCACCTCGGT
GCAGCCGGTGGCACTGGTCTACGGCAAGGTCAATAGCATCAGCGGCGATTCGTCTGGCGTGCTGGTGGATGTTGGCAACG
GGCAGCAGGCGAACGTGGACGACGTGCGCCGCATTCTCTGA

Upstream 100 bases:

>100_bases
TCGTACCAGGCCAACGTTGAGGTGCTGAACAGCGCCAAGAACATGATGCTCAAGACGCTGACCATCGGCCAGTAACGACA
ACGGACTCATCCAACGCGAC

Downstream 100 bases:

>100_bases
TTCTGAACGCGGGGCCGCGGCCCTGATTCCTGCCGGCAGCGCGCTGGCGACAAACGAAATACAGGTATCAAGGAGAAACT
AAATGGGTTTCGGTCAAGGC

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTTTSSVNNSSSASSTTNVNAALQSGSASAADLQSNFLKMLVTQMNNQDPLNPMDNAQLTSQLAQISTVSSMQTMNSTLT
QLLNQTSASRAMDSAALIGRTVMVPGSQFSVKDGVAGQFGVDLPSTADAVTVNVLDAHGNVVRTIDMKGQTAGVHDIAWD
GKNDAGVAVADGDYSFKVSATANGTSVQPVALVYGKVNSISGDSSGVLVDVGNGQQANVDDVRRIL

Sequences:

>Translated_226_residues
MTTTSSVNNSSSASSTTNVNAALQSGSASAADLQSNFLKMLVTQMNNQDPLNPMDNAQLTSQLAQISTVSSMQTMNSTLT
QLLNQTSASRAMDSAALIGRTVMVPGSQFSVKDGVAGQFGVDLPSTADAVTVNVLDAHGNVVRTIDMKGQTAGVHDIAWD
GKNDAGVAVADGDYSFKVSATANGTSVQPVALVYGKVNSISGDSSGVLVDVGNGQQANVDDVRRIL
>Mature_225_residues
TTTSSVNNSSSASSTTNVNAALQSGSASAADLQSNFLKMLVTQMNNQDPLNPMDNAQLTSQLAQISTVSSMQTMNSTLTQ
LLNQTSASRAMDSAALIGRTVMVPGSQFSVKDGVAGQFGVDLPSTADAVTVNVLDAHGNVVRTIDMKGQTAGVHDIAWDG
KNDAGVAVADGDYSFKVSATANGTSVQPVALVYGKVNSISGDSSGVLVDVGNGQQANVDDVRRIL

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=208, Percent_Identity=42.7884615384615, Blast_Score=151, Evalue=4e-38,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 23202; Mature: 23071

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTSSVNNSSSASSTTNVNAALQSGSASAADLQSNFLKMLVTQMNNQDPLNPMDNAQLT
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
SQLAQISTVSSMQTMNSTLTQLLNQTSASRAMDSAALIGRTVMVPGSQFSVKDGVAGQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEECCCCCCCCCC
VDLPSTADAVTVNVLDAHGNVVRTIDMKGQTAGVHDIAWDGKNDAGVAVADGDYSFKVSA
CCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEECCCEEEEEEE
TANGTSVQPVALVYGKVNSISGDSSGVLVDVGNGQQANVDDVRRIL
CCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHC
>Mature Secondary Structure 
TTTSSVNNSSSASSTTNVNAALQSGSASAADLQSNFLKMLVTQMNNQDPLNPMDNAQLT
CCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
SQLAQISTVSSMQTMNSTLTQLLNQTSASRAMDSAALIGRTVMVPGSQFSVKDGVAGQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEECCCCCCCCCC
VDLPSTADAVTVNVLDAHGNVVRTIDMKGQTAGVHDIAWDGKNDAGVAVADGDYSFKVSA
CCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEECCCEEEEEEE
TANGTSVQPVALVYGKVNSISGDSSGVLVDVGNGQQANVDDVRRIL
CCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]