| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is dhbE [H]
Identifier: 73539306
GI number: 73539306
Start: 2280505
End: 2282202
Strand: Reverse
Name: dhbE [H]
Synonym: Reut_B5484
Alternate gene names: 73539306
Gene position: 2282202-2280505 (Counterclockwise)
Preceding gene: 73539307
Following gene: 73539305
Centisome position: 83.72
GC content: 65.19
Gene sequence:
>1698_bases ATGACCGGCATTCATTTCCCGATTGAAGGCGTGGCGTACTGCCCGCCGGCAGACGCTGAACGGTACTTCAGAAGCGGTGC ATGGATCGACGACACGCTCGGCGGCGCACTGCGCAAGACCGCACGGCGCGCGCCGGACCAGGCCGCGTTCATCAGCGACG AGCGGACGATCACGTTTGCGGAACTCGATGCGCTCAGCGAGCGCCTCGGCGCCGCGCTGCACCAGCTCGGCCTGCTTCCG GGCGACCGTGCCATCTTCCAGATGGGCACCACGATCGACTCGGTCATCGCGCTGATTGGCTGCTACAAGGCAGGCGTCGT TCCCGTGTGCGCGGTGCCGCAATACCGTGAAGTCGAGATCGGCCAGCTTTCCGCGCAGTCGGAACCCCGCGCCTACTTCG TGCAAGCCGATTTCAGTGCATTCGACCTGACCGGCTTTGCCCGCGGCATGGCGCAGCGCCACCCGTCGATCGAACACCTG TTCGTCGCGCGGGGCGGCAGTCCTGCGGCACAGGGCCAGGTTGCCGAACATGGCATGGATGCGCTCATCGAGTCGATCCC TTACGAACAGGCTGTCGAAGTGCTGGCCGGCGTTCCGATCGGCAGCGAGGACGTGCTCAGCTTCCAGCTTTCCGGCGGCA CGACCGGCGTACCGAAGATCATTCCGCGCTTTCATGCCGAATATATCGGCCATGCGCTGGCCTGCATGCGCCAGCTCGGC CAGACCGCGCAAAGCCGGCTGATCTGGTCGCTGCCGCTGCTGCACAACGCGGGACAGGTCTACGTGCTGGTGCCAGCGGT GGCGGGTGGCATGACGTCGGTGCTGATGCCGCGCGTCGATATCGCGCGGATGCTGGAACTGATCGAACAGCATCGCGTCA CGCATGGCATGTCGATTGGCCCGGTCGCGCCGCAGATGATCGCGTACCAGCACATCGCGCGGCACGACCTGTCGTCGCTG GAGCTGTTCGGCACGATGACGCGCGCCGATGCGCTCGAAGCGCATCTCGGCGTGCCCTGCTTCAACCTGTTCGGCACCAC CGAAGGATTGCTGCTCGGTGGCGGCGCGCGCTTCCCCTCCGCGATGCGACATCGCACCCAGGGCTTCTCTGGTTGCCCCG ATGACGATCTCCGCCTGCTGGTGCCCGGCACGGACGAAGCTGCTGCACCGGGAACGCCGGGCGAACTCTGCTTCCGTGGC CCGTCGAGCCTGCGCGGCTACTACAAGGCGCCGGAGGCCACCGCGCAGTCCCTGACCGCGGATGGGTTCGTTCGCTCCGG CGACCTCATGACCGAGCACGTGATCGACGGCTACCGTTGCTTCGCATTTGAAGGCCGCCTGCGCGACAACGTGAACCGGG GCGGCGAAAAGATCGGCTCTGAAGAAGTGGAGGCGTATGTCAGCCGGCATCCGGCAGTCGCGGATGCCAAGCTCGTCGCG ATGCCAGATCCGCTGTACGGCGAGAAGGGTTGCATCTACGTGATCCTGCGCGCGGGCCACGTAGCGCCCGATGTGACCGA ACTCGCAGCATTCCTCGTAGAACAGGGACTCGCGAAATTCAAATGTCCCGAGCGAATTGAAGTTGTCGCCGAGTTTCCGG TGACGCGGGTCGGCAAGGTCGACAAGGCCGCCTTGCGCGCCATGGTCGCGCGCCAGCTTGAAAACGAAGCCACGGAATTG GGAAGGAAGTCAGCATGA
Upstream 100 bases:
>100_bases CTTTACCGGCGGCCTCGACGGCAGGATAGAGCGATTCGACCGCGATATCGTGCGCATCGTGCCGCGCGATGCCGCGGCGC AATGAGTTCCGGAGGCCATC
Downstream 100 bases:
>100_bases AGAGCCGTACTTACCGAATCGGGCAGATCGTGCCCAGCTCCAACACCACGATGGAGACCGAGATTCCCGCCATGCTGCGC GCACGGGAACAGATCCTGCC
Product: AMP-dependent synthetase and ligase
Products: (2,3-Dihydroxybenzoyl)adenylate; Diphosphate [C]
Alternate protein names: Dihydroxybenzoic acid-activating enzyme [H]
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MTGIHFPIEGVAYCPPADAERYFRSGAWIDDTLGGALRKTARRAPDQAAFISDERTITFAELDALSERLGAALHQLGLLP GDRAIFQMGTTIDSVIALIGCYKAGVVPVCAVPQYREVEIGQLSAQSEPRAYFVQADFSAFDLTGFARGMAQRHPSIEHL FVARGGSPAAQGQVAEHGMDALIESIPYEQAVEVLAGVPIGSEDVLSFQLSGGTTGVPKIIPRFHAEYIGHALACMRQLG QTAQSRLIWSLPLLHNAGQVYVLVPAVAGGMTSVLMPRVDIARMLELIEQHRVTHGMSIGPVAPQMIAYQHIARHDLSSL ELFGTMTRADALEAHLGVPCFNLFGTTEGLLLGGGARFPSAMRHRTQGFSGCPDDDLRLLVPGTDEAAAPGTPGELCFRG PSSLRGYYKAPEATAQSLTADGFVRSGDLMTEHVIDGYRCFAFEGRLRDNVNRGGEKIGSEEVEAYVSRHPAVADAKLVA MPDPLYGEKGCIYVILRAGHVAPDVTELAAFLVEQGLAKFKCPERIEVVAEFPVTRVGKVDKAALRAMVARQLENEATEL GRKSA
Sequences:
>Translated_565_residues MTGIHFPIEGVAYCPPADAERYFRSGAWIDDTLGGALRKTARRAPDQAAFISDERTITFAELDALSERLGAALHQLGLLP GDRAIFQMGTTIDSVIALIGCYKAGVVPVCAVPQYREVEIGQLSAQSEPRAYFVQADFSAFDLTGFARGMAQRHPSIEHL FVARGGSPAAQGQVAEHGMDALIESIPYEQAVEVLAGVPIGSEDVLSFQLSGGTTGVPKIIPRFHAEYIGHALACMRQLG QTAQSRLIWSLPLLHNAGQVYVLVPAVAGGMTSVLMPRVDIARMLELIEQHRVTHGMSIGPVAPQMIAYQHIARHDLSSL ELFGTMTRADALEAHLGVPCFNLFGTTEGLLLGGGARFPSAMRHRTQGFSGCPDDDLRLLVPGTDEAAAPGTPGELCFRG PSSLRGYYKAPEATAQSLTADGFVRSGDLMTEHVIDGYRCFAFEGRLRDNVNRGGEKIGSEEVEAYVSRHPAVADAKLVA MPDPLYGEKGCIYVILRAGHVAPDVTELAAFLVEQGLAKFKCPERIEVVAEFPVTRVGKVDKAALRAMVARQLENEATEL GRKSA >Mature_564_residues TGIHFPIEGVAYCPPADAERYFRSGAWIDDTLGGALRKTARRAPDQAAFISDERTITFAELDALSERLGAALHQLGLLPG DRAIFQMGTTIDSVIALIGCYKAGVVPVCAVPQYREVEIGQLSAQSEPRAYFVQADFSAFDLTGFARGMAQRHPSIEHLF VARGGSPAAQGQVAEHGMDALIESIPYEQAVEVLAGVPIGSEDVLSFQLSGGTTGVPKIIPRFHAEYIGHALACMRQLGQ TAQSRLIWSLPLLHNAGQVYVLVPAVAGGMTSVLMPRVDIARMLELIEQHRVTHGMSIGPVAPQMIAYQHIARHDLSSLE LFGTMTRADALEAHLGVPCFNLFGTTEGLLLGGGARFPSAMRHRTQGFSGCPDDDLRLLVPGTDEAAAPGTPGELCFRGP SSLRGYYKAPEATAQSLTADGFVRSGDLMTEHVIDGYRCFAFEGRLRDNVNRGGEKIGSEEVEAYVSRHPAVADAKLVAM PDPLYGEKGCIYVILRAGHVAPDVTELAAFLVEQGLAKFKCPERIEVVAEFPVTRVGKVDKAALRAMVARQLENEATELG RKSA
Specific function: Activation of the carboxylate group of 2,3-dihydroxy- benzoate (DHB), via ATP-dependent PPi exchange reactions, to the acyladenylate [H]
COG id: COG1021
COG function: function code Q; Peptide arylation enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=590, Percent_Identity=23.728813559322, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI38505220, Length=541, Percent_Identity=23.6598890942699, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI187761345, Length=552, Percent_Identity=25.9057971014493, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI187761343, Length=552, Percent_Identity=25.9057971014493, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI115511026, Length=554, Percent_Identity=23.826714801444, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI58082049, Length=551, Percent_Identity=24.5009074410163, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI157311624, Length=545, Percent_Identity=24.2201834862385, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI157311622, Length=545, Percent_Identity=24.2201834862385, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI28416953, Length=577, Percent_Identity=25.1299826689775, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI42544132, Length=539, Percent_Identity=23.0055658627087, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI122937307, Length=539, Percent_Identity=23.5621521335807, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1786810, Length=555, Percent_Identity=33.1531531531532, Blast_Score=251, Evalue=6e-68, Organism=Escherichia coli, GI145693145, Length=554, Percent_Identity=27.4368231046931, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI1788107, Length=568, Percent_Identity=25.3521126760563, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI221142682, Length=518, Percent_Identity=22.7799227799228, Blast_Score=103, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17560308, Length=559, Percent_Identity=25.4025044722719, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI71994703, Length=553, Percent_Identity=23.869801084991, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71994694, Length=553, Percent_Identity=23.869801084991, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71994690, Length=553, Percent_Identity=23.869801084991, Blast_Score=116, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17559526, Length=570, Percent_Identity=23.859649122807, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17538037, Length=551, Percent_Identity=23.956442831216, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI32563687, Length=518, Percent_Identity=20.8494208494208, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17558820, Length=508, Percent_Identity=21.4566929133858, Blast_Score=94, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17531443, Length=536, Percent_Identity=21.455223880597, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17557194, Length=548, Percent_Identity=22.0802919708029, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71985884, Length=408, Percent_Identity=23.0392156862745, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319699, Length=365, Percent_Identity=24.6575342465753, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323182, Length=618, Percent_Identity=23.9482200647249, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI24581924, Length=562, Percent_Identity=23.4875444839858, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI21355181, Length=497, Percent_Identity=20.9255533199195, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI21358303, Length=485, Percent_Identity=22.8865979381443, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI18859661, Length=528, Percent_Identity=22.9166666666667, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR011963 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: 2.7.7.58; 2.3.1.- [C]
Molecular weight: Translated: 60762; Mature: 60631
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIHFPIEGVAYCPPADAERYFRSGAWIDDTLGGALRKTARRAPDQAAFISDERTITFA CCCCCCCCCCEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEHH ELDALSERLGAALHQLGLLPGDRAIFQMGTTIDSVIALIGCYKAGVVPVCAVPQYREVEI HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCC GQLSAQSEPRAYFVQADFSAFDLTGFARGMAQRHPSIEHLFVARGGSPAAQGQVAEHGMD CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCCHHHHHHHH ALIESIPYEQAVEVLAGVPIGSEDVLSFQLSGGTTGVPKIIPRFHAEYIGHALACMRQLG HHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QTAQSRLIWSLPLLHNAGQVYVLVPAVAGGMTSVLMPRVDIARMLELIEQHRVTHGMSIG HHHHHHEEEEEHHHCCCCEEEEEECCHHCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCC PVAPQMIAYQHIARHDLSSLELFGTMTRADALEAHLGVPCFNLFGTTEGLLLGGGARFPS CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCH AMRHRTQGFSGCPDDDLRLLVPGTDEAAAPGTPGELCFRGPSSLRGYYKAPEATAQSLTA HHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHHH DGFVRSGDLMTEHVIDGYRCFAFEGRLRDNVNRGGEKIGSEEVEAYVSRHPAVADAKLVA CCCEECCCHHHHHHHCCEEEEEECCHHHHHHHHCHHHCCHHHHHHHHHCCCCCCCCEEEE MPDPLYGEKGCIYVILRAGHVAPDVTELAAFLVEQGLAKFKCPERIEVVAEFPVTRVGKV CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCH DKAALRAMVARQLENEATELGRKSA HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TGIHFPIEGVAYCPPADAERYFRSGAWIDDTLGGALRKTARRAPDQAAFISDERTITFA CCCCCCCCCEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEHH ELDALSERLGAALHQLGLLPGDRAIFQMGTTIDSVIALIGCYKAGVVPVCAVPQYREVEI HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCC GQLSAQSEPRAYFVQADFSAFDLTGFARGMAQRHPSIEHLFVARGGSPAAQGQVAEHGMD CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCCHHHHHHHH ALIESIPYEQAVEVLAGVPIGSEDVLSFQLSGGTTGVPKIIPRFHAEYIGHALACMRQLG HHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QTAQSRLIWSLPLLHNAGQVYVLVPAVAGGMTSVLMPRVDIARMLELIEQHRVTHGMSIG HHHHHHEEEEEHHHCCCCEEEEEECCHHCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCC PVAPQMIAYQHIARHDLSSLELFGTMTRADALEAHLGVPCFNLFGTTEGLLLGGGARFPS CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCH AMRHRTQGFSGCPDDDLRLLVPGTDEAAAPGTPGELCFRGPSSLRGYYKAPEATAQSLTA HHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHHH DGFVRSGDLMTEHVIDGYRCFAFEGRLRDNVNRGGEKIGSEEVEAYVSRHPAVADAKLVA CCCEECCCHHHHHHHCCEEEEEECCHHHHHHHHCHHHCCHHHHHHHHHCCCCCCCCEEEE MPDPLYGEKGCIYVILRAGHVAPDVTELAAFLVEQGLAKFKCPERIEVVAEFPVTRVGKV CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCH DKAALRAMVARQLENEATELGRKSA HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2,3-Dihydroxybenzoate; ATP [C]
Specific reaction: 2,3-Dihydroxybenzoate + ATP <==> (2,3-Dihydroxybenzoyl)adenylate + Diphosphate [C]
General reaction: Ligases; Forming Carbon-Sulfur Bonds; Acid-Thiol Ligases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8921902; 9384377; 8224884; 12221282 [H]