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The map label for this gene is fecI [C]

Identifier: 73539289

GI number: 73539289

Start: 2258258

End: 2259115

Strand: Reverse

Name: fecI [C]

Synonym: Reut_B5467

Alternate gene names: 73539289

Gene position: 2259115-2258258 (Counterclockwise)

Preceding gene: 73539290

Following gene: 73539282

Centisome position: 82.87

GC content: 65.85

Gene sequence:

>858_bases
ATGACCGACGCCAATCTCGCCGACGCCGCGGCAAGTTTCGAGCCGCTGCGGCGCACGCTGATCCGGGTCGGGTACCGCAT
GCTCGGCTCGGTCGCCGATGCCGAGGATATCGTGCAGGACGCGTTCATCCGCTGGGTGAACGCCGAGCGCACCGAGGTGC
GCGTGCCCGAAGCGTTCCTGCGCCGCATGGTCATGCGGATGTGCCTGGACCAGCTGAAGTCCGCGCGCCACCAGCGCGAA
ACCTACATCGGCCCGTGGCTGCCCGACCCTGTCGTCGAGGAAGACGAGCAGGAGGACGTCACGCTGCCACTGATGCTCGC
GCTCGAACGGCTGTCACCGCTCGAACGCGCGGCGTTCCTGCTGCACGACGTATTCGGTCTGGAATTCGACGAGATCGCGG
CGACGATACAGCGCGAGCCCGCCGCGTGCCGGCAGTTAGCAGCGCGCGCGCGTACCCATGTGCGCGAATCGCGTCCGCGC
TTCCAGGTCGAAAAGCAGCGCGGCATCGAACTGGCAAAGGCGTTCTTCGACGCGTCGCGCAGCGGCGACATGAGCGCGCT
AGGCGCCATGCTGGCCGCTGATGTGAGCCTGCAAGCCGACGGCGGCGGCAAGCGGTCGGCAGTCGGACAGCCGGTATTCG
GCTTCGACGATGTGATGAAGCTGCATGAAACCCTGTCGGCGTACTTCCTCAAGAACGGCTCGACGTTCGTGCGCGCGGGA
TTTATCAACGGGCTGCCCGGCATCGTCACGCTCGAGGCCGATGGCGAGCTCCAGACGACCGCGCTCGACATCGAAGACGG
CAAGATCACGGCCATCTATGTCATGCGCAATCCGGACAAGCTGCGGCATCTGCATTAG

Upstream 100 bases:

>100_bases
TCATGATCAACGTCATCAACGGGTGGAACCGCCTTGCGGTCGGCTTCGGCATGTGGGTCGACCCGGCAGCGGCCAAATCG
GCAGCCAAGGCAGTCGCCTG

Downstream 100 bases:

>100_bases
CGTGTGCTAACTGGTGGTGTGCGCACGCTGCCGCCAGTTCAGGACGCGGCTTGTGCCTGCGGAAACTTCCAGCGGCCGTC
GAGGATCTCCGCATGCGGCA

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma-70 Factor; ECF-Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase ECF-Type Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70-Like Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTDANLADAAASFEPLRRTLIRVGYRMLGSVADAEDIVQDAFIRWVNAERTEVRVPEAFLRRMVMRMCLDQLKSARHQRE
TYIGPWLPDPVVEEDEQEDVTLPLMLALERLSPLERAAFLLHDVFGLEFDEIAATIQREPAACRQLAARARTHVRESRPR
FQVEKQRGIELAKAFFDASRSGDMSALGAMLAADVSLQADGGGKRSAVGQPVFGFDDVMKLHETLSAYFLKNGSTFVRAG
FINGLPGIVTLEADGELQTTALDIEDGKITAIYVMRNPDKLRHLH

Sequences:

>Translated_285_residues
MTDANLADAAASFEPLRRTLIRVGYRMLGSVADAEDIVQDAFIRWVNAERTEVRVPEAFLRRMVMRMCLDQLKSARHQRE
TYIGPWLPDPVVEEDEQEDVTLPLMLALERLSPLERAAFLLHDVFGLEFDEIAATIQREPAACRQLAARARTHVRESRPR
FQVEKQRGIELAKAFFDASRSGDMSALGAMLAADVSLQADGGGKRSAVGQPVFGFDDVMKLHETLSAYFLKNGSTFVRAG
FINGLPGIVTLEADGELQTTALDIEDGKITAIYVMRNPDKLRHLH
>Mature_284_residues
TDANLADAAASFEPLRRTLIRVGYRMLGSVADAEDIVQDAFIRWVNAERTEVRVPEAFLRRMVMRMCLDQLKSARHQRET
YIGPWLPDPVVEEDEQEDVTLPLMLALERLSPLERAAFLLHDVFGLEFDEIAATIQREPAACRQLAARARTHVRESRPRF
QVEKQRGIELAKAFFDASRSGDMSALGAMLAADVSLQADGGGKRSAVGQPVFGFDDVMKLHETLSAYFLKNGSTFVRAGF
INGLPGIVTLEADGELQTTALDIEDGKITAIYVMRNPDKLRHLH

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31813; Mature: 31682

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDANLADAAASFEPLRRTLIRVGYRMLGSVADAEDIVQDAFIRWVNAERTEVRVPEAFL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHEECCHHHH
RRMVMRMCLDQLKSARHQRETYIGPWLPDPVVEEDEQEDVTLPLMLALERLSPLERAAFL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHH
LHDVFGLEFDEIAATIQREPAACRQLAARARTHVRESRPRFQVEKQRGIELAKAFFDASR
HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCC
SGDMSALGAMLAADVSLQADGGGKRSAVGQPVFGFDDVMKLHETLSAYFLKNGSTFVRAG
CCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEH
FINGLPGIVTLEADGELQTTALDIEDGKITAIYVMRNPDKLRHLH
HHCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEECCHHHCCCC
>Mature Secondary Structure 
TDANLADAAASFEPLRRTLIRVGYRMLGSVADAEDIVQDAFIRWVNAERTEVRVPEAFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHEECCHHHH
RRMVMRMCLDQLKSARHQRETYIGPWLPDPVVEEDEQEDVTLPLMLALERLSPLERAAFL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHH
LHDVFGLEFDEIAATIQREPAACRQLAARARTHVRESRPRFQVEKQRGIELAKAFFDASR
HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCC
SGDMSALGAMLAADVSLQADGGGKRSAVGQPVFGFDDVMKLHETLSAYFLKNGSTFVRAG
CCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEH
FINGLPGIVTLEADGELQTTALDIEDGKITAIYVMRNPDKLRHLH
HHCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA