Definition Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence.
Accession NC_007348
Length 2,726,152

Click here to switch to the map view.

The map label for this gene is 73539228

Identifier: 73539228

GI number: 73539228

Start: 2193427

End: 2193927

Strand: Direct

Name: 73539228

Synonym: Reut_B5406

Alternate gene names: NA

Gene position: 2193427-2193927 (Clockwise)

Preceding gene: 73539227

Following gene: 73539229

Centisome position: 80.46

GC content: 67.07

Gene sequence:

>501_bases
ATGATCGCCGTGCTGTTTTGCGCGGCGACCCTCTGGACCGACCTGGCATATCGACGTGTTCCGAACGCCTTGCTGGCGGC
GGTGCTGGTGGCTCTCAGCCTGGCATTGCTGACTGGCAACGCGCCGGAGCCGGCGATCTCTGCACGGTTGCTCGGCGCAG
GGCTTGGCGCGGCTGTCACGCTACCCGTCTACGCCCTCGGGCGCATGGCGGCGGGCGATGTCAAGTTCCTGGCCGTGGCA
GGGCTCTTCACGGGCCCGCAAGGGTTGGTCACGGTATGGGTTGTCGGCAGCCTGCTCGGACTGGTGCATGCGGTGCTGGC
GTATGCCTTGGATTCGCGTCCGCTGTCGGCGCTCCGGCAGCGCATGCCGGCCGCGCTGCGGGTGCACACCGCGATCAGGC
CAGCCTCGCAAAGCAGTCGGCAGTTCAGCAAGGTGCGCGGCATTCCTTATGCCGCCTACCTTGCAGCAGGCATGCTGGTA
TGGATGGGCACGCGTGCATGA

Upstream 100 bases:

>100_bases
TGGCGATAATCTGAAGAACGGTTTCTCCAACCTGGCCACGCGCGTGGCGGCATGGCTGCCAGGCACCGGCGGCACACCAA
CCCCCTGAACTGAGCCCGGC

Downstream 100 bases:

>100_bases
GTTGCCTGTCCTTGCAGCGAGATGGCGCCGCCGGTCGGCGCCCACATGAACAGGACCGGGTGAAGCATGCGTGCGCAGGA
TGAAATCTTGTGGCGGCGGC

Product: peptidase A24A, prepilin type IV

Products: NA

Alternate protein names: Prepilin Peptidase Transmembrane Protein; Flp Pilus Assembly Protein Protease CpaA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MIAVLFCAATLWTDLAYRRVPNALLAAVLVALSLALLTGNAPEPAISARLLGAGLGAAVTLPVYALGRMAAGDVKFLAVA
GLFTGPQGLVTVWVVGSLLGLVHAVLAYALDSRPLSALRQRMPAALRVHTAIRPASQSSRQFSKVRGIPYAAYLAAGMLV
WMGTRA

Sequences:

>Translated_166_residues
MIAVLFCAATLWTDLAYRRVPNALLAAVLVALSLALLTGNAPEPAISARLLGAGLGAAVTLPVYALGRMAAGDVKFLAVA
GLFTGPQGLVTVWVVGSLLGLVHAVLAYALDSRPLSALRQRMPAALRVHTAIRPASQSSRQFSKVRGIPYAAYLAAGMLV
WMGTRA
>Mature_166_residues
MIAVLFCAATLWTDLAYRRVPNALLAAVLVALSLALLTGNAPEPAISARLLGAGLGAAVTLPVYALGRMAAGDVKFLAVA
GLFTGPQGLVTVWVVGSLLGLVHAVLAYALDSRPLSALRQRMPAALRVHTAIRPASQSSRQFSKVRGIPYAAYLAAGMLV
WMGTRA

Specific function: Unknown

COG id: COG4960

COG function: function code OU; Flp pilus assembly protein, protease CpaA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.23.43

Molecular weight: Translated: 17278; Mature: 17278

Theoretical pI: Translated: 11.62; Mature: 11.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVLFCAATLWTDLAYRRVPNALLAAVLVALSLALLTGNAPEPAISARLLGAGLGAAVT
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHH
LPVYALGRMAAGDVKFLAVAGLFTGPQGLVTVWVVGSLLGLVHAVLAYALDSRPLSALRQ
HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RMPAALRVHTAIRPASQSSRQFSKVRGIPYAAYLAAGMLVWMGTRA
HCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIAVLFCAATLWTDLAYRRVPNALLAAVLVALSLALLTGNAPEPAISARLLGAGLGAAVT
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHH
LPVYALGRMAAGDVKFLAVAGLFTGPQGLVTVWVVGSLLGLVHAVLAYALDSRPLSALRQ
HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RMPAALRVHTAIRPASQSSRQFSKVRGIPYAAYLAAGMLVWMGTRA
HCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA