Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is livJ [C]
Identifier: 73539218
GI number: 73539218
Start: 2181558
End: 2182694
Strand: Direct
Name: livJ [C]
Synonym: Reut_B5396
Alternate gene names: 73539218
Gene position: 2181558-2182694 (Clockwise)
Preceding gene: 73539217
Following gene: 73539220
Centisome position: 80.02
GC content: 65.79
Gene sequence:
>1137_bases ATGAAGGCAACATGGTTTGCGTGCGGCATGCTGGCCGCCACGCTTGGGATCGCCGCGCCTGCGGCATTGGCGGAGCCGGG CGTCAGCAAGACCGTGATCCGCATCGGGCAATCGGCCGGCGTGTCCGGCCCGGTGGCAGGATCGGTCAGGGAACAGATCG AAGGCGCACAGGTGTACCTGCGCGCGGTCAACGCCAACGGTGGCGTCGCGGGCCGCCGCATCGAACTGGTGACGCTCGAC GACGGGTTTGACGCAAAACGCACGCCGGACAACGTGCGCAAGCTGATCGACGACGAGAAGGTTTTCGCGCTGTTCATGGT GCGCGGCACGCCGCAGAACGAAAGCATCCTGCCGATCATCACGGCGGAGAAGGTACCGCTGGTGGCACCGCTGACAGGCG CGATCACGCTGCACCGCCCGGTCAACCGCTACGTGTTCAATGTGCGCGCCAAATATCAGGATGAAGTCGCGCGCGCCGTC AACCATCTGTCGACTTCGGGCATGACCCGCATCGCCATCGTCTACGCGAACGACGGCTTCGGCAAGGACGTATACGAGGG CTTCACCGCCGCCTTGCAGGCGCGCGGCGCCCAGCCGGCCGCGGCGGCCAGCTTTGCACGGCCGATGGGAGATATCACGC AGCAGGTCGCGACCGTGAACAAGACCGACCCGCAGGCGGTACTGGTCATCGGTTCGGGTTCGGAAGCGGCGCGCGTGATT CGCGACATGCGCAAGGCGGGCAGCCAGGCGCAGTTCGTCACGCTGTCGAACAACGCGGCCGACTCGTTCATCAAGGAACT TGGCGATGATGCGCGCGGGCTCATCATCACGCAGATCGTTCCCGGTACGAACTCGAGCCAGATGACGCTGGCCAGCGAAT ACCGCAGCCTGGCGCGGCAGCAGGGCGTGACGCTGACCAACGCCGGCATGGAAGGCTTCATGTCCGCCAAGGTGCTCGTG GAAGGCCTGCGCCGCGCGGGGCCGGACCTGACCCGCGAGCGCCTGGTCACGGCGCTGGAGAACCTGCGCGACTACGACAT GGGGGGCATTCTGATCAGTTACAGCCCGAGCCGCCACACCGGGTCGTCGTTTGTCGAGATGTCGATCGTGTCGTCCACAG GCAAGCTGATCCGCTGA
Upstream 100 bases:
>100_bases GCGAAACGTCGCATTGGCGCTGTCGCATGAACGCATGCATGGCGCAGTCGGCAGCCACGCTACAACTACAGCACGCCACT AGGGCGGAGGGGTCAGGACA
Downstream 100 bases:
>100_bases CCGGCACAGCGCCAGCCGGCAGGGCGTACCCATTTCTGCGTGGTGCTTCGCCCTGCCATCAATGCCGCACCGGACAAGGC GTGGAAGCGGTGCCAATCCA
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKATWFACGMLAATLGIAAPAALAEPGVSKTVIRIGQSAGVSGPVAGSVREQIEGAQVYLRAVNANGGVAGRRIELVTLD DGFDAKRTPDNVRKLIDDEKVFALFMVRGTPQNESILPIITAEKVPLVAPLTGAITLHRPVNRYVFNVRAKYQDEVARAV NHLSTSGMTRIAIVYANDGFGKDVYEGFTAALQARGAQPAAAASFARPMGDITQQVATVNKTDPQAVLVIGSGSEAARVI RDMRKAGSQAQFVTLSNNAADSFIKELGDDARGLIITQIVPGTNSSQMTLASEYRSLARQQGVTLTNAGMEGFMSAKVLV EGLRRAGPDLTRERLVTALENLRDYDMGGILISYSPSRHTGSSFVEMSIVSSTGKLIR
Sequences:
>Translated_378_residues MKATWFACGMLAATLGIAAPAALAEPGVSKTVIRIGQSAGVSGPVAGSVREQIEGAQVYLRAVNANGGVAGRRIELVTLD DGFDAKRTPDNVRKLIDDEKVFALFMVRGTPQNESILPIITAEKVPLVAPLTGAITLHRPVNRYVFNVRAKYQDEVARAV NHLSTSGMTRIAIVYANDGFGKDVYEGFTAALQARGAQPAAAASFARPMGDITQQVATVNKTDPQAVLVIGSGSEAARVI RDMRKAGSQAQFVTLSNNAADSFIKELGDDARGLIITQIVPGTNSSQMTLASEYRSLARQQGVTLTNAGMEGFMSAKVLV EGLRRAGPDLTRERLVTALENLRDYDMGGILISYSPSRHTGSSFVEMSIVSSTGKLIR >Mature_378_residues MKATWFACGMLAATLGIAAPAALAEPGVSKTVIRIGQSAGVSGPVAGSVREQIEGAQVYLRAVNANGGVAGRRIELVTLD DGFDAKRTPDNVRKLIDDEKVFALFMVRGTPQNESILPIITAEKVPLVAPLTGAITLHRPVNRYVFNVRAKYQDEVARAV NHLSTSGMTRIAIVYANDGFGKDVYEGFTAALQARGAQPAAAASFARPMGDITQQVATVNKTDPQAVLVIGSGSEAARVI RDMRKAGSQAQFVTLSNNAADSFIKELGDDARGLIITQIVPGTNSSQMTLASEYRSLARQQGVTLTNAGMEGFMSAKVLV EGLRRAGPDLTRERLVTALENLRDYDMGGILISYSPSRHTGSSFVEMSIVSSTGKLIR
Specific function: This Protein Is A Component Of The Leucine, Isoleucine, Valine, (Threonine) Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids. [C]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40170; Mature: 40170
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATWFACGMLAATLGIAAPAALAEPGVSKTVIRIGQSAGVSGPVAGSVREQIEGAQVYL CCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEE RAVNANGGVAGRRIELVTLDDGFDAKRTPDNVRKLIDDEKVFALFMVRGTPQNESILPII EEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEE TAEKVPLVAPLTGAITLHRPVNRYVFNVRAKYQDEVARAVNHLSTSGMTRIAIVYANDGF ECCCCCEEECCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC GKDVYEGFTAALQARGAQPAAAASFARPMGDITQQVATVNKTDPQAVLVIGSGSEAARVI CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH RDMRKAGSQAQFVTLSNNAADSFIKELGDDARGLIITQIVPGTNSSQMTLASEYRSLARQ HHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHH QGVTLTNAGMEGFMSAKVLVEGLRRAGPDLTRERLVTALENLRDYDMGGILISYSPSRHT CCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC GSSFVEMSIVSSTGKLIR CCCEEEEEEECCCCCCCC >Mature Secondary Structure MKATWFACGMLAATLGIAAPAALAEPGVSKTVIRIGQSAGVSGPVAGSVREQIEGAQVYL CCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEE RAVNANGGVAGRRIELVTLDDGFDAKRTPDNVRKLIDDEKVFALFMVRGTPQNESILPII EEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEE TAEKVPLVAPLTGAITLHRPVNRYVFNVRAKYQDEVARAVNHLSTSGMTRIAIVYANDGF ECCCCCEEECCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC GKDVYEGFTAALQARGAQPAAAASFARPMGDITQQVATVNKTDPQAVLVIGSGSEAARVI CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH RDMRKAGSQAQFVTLSNNAADSFIKELGDDARGLIITQIVPGTNSSQMTLASEYRSLARQ HHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHH QGVTLTNAGMEGFMSAKVLVEGLRRAGPDLTRERLVTALENLRDYDMGGILISYSPSRHT CCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC GSSFVEMSIVSSTGKLIR CCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA