Click here to switch to the map view.

The map label for this gene is yhjB [C]

Identifier: 73539202

GI number: 73539202

Start: 2164293

End: 2165240

Strand: Reverse

Name: yhjB [C]

Synonym: Reut_B5380

Alternate gene names: 73539202

Gene position: 2165240-2164293 (Counterclockwise)

Preceding gene: 73539203

Following gene: 73539201

Centisome position: 79.42

GC content: 68.14

Gene sequence:

>948_bases
ATGAACGCCTTGCTGATCGAGGAGCATCCTCTGCTCCGGCTCGGGCTGCTGCAGATGCTCGAGAACATCCAGGATTCGGG
TCACGTCGCGGCGCTTGCGCCTGACGAACTCGGGAGAAACGACAACGTGCCGCACAATGCCGACCTGCTGGTGTTCGGCA
TGCCGGCGGACACACGCATCGGCTGGGGGCAACTGCAGGTCGCACGCGAACTGCTGTCGCCGCAGCGCATCCTGATCCTG
GCCGACCAATTGCCACTGCACATGCCAGATGCGGACAGTGCGCGCAGCGTCTGCGGCTGCCTGCCAAAATCGGCTTCGCT
GGCAGTGATCGAGGCCGCCATCCGGCTCGCAGTATCAGCAGTGCAAGGCCTGCTGTTCAGCGCGGAGATCGGCACCATGC
CGTCGGCATCGCGCCCGGCGCTGCCCGTCACCCAATCGCTCGCATCCGCCGCGCCGCTGCCGCCAACGGCCCAGGCCGAC
CCGCTGTCCTCGCTGGCAACGTGCGCCAGCGCCCCGCGCGGCGCACTGCGCAGCAGCGTTGCCGTGCGCGACCTGACTGG
CCTCAGGCCCGGACAGCCACTGTCCGGCAGCTCGCGCCCGAGCGAGCCGCCCGCCGACGCCGAGCCAAGCTATGACGAAG
CCGAGATGCTCAAGATCACGCCGCGCCAGTACGAGGTACTGGTGCTGCTGGCACGCGGCTATCCGATCAAAACCGTCAGC
CGCATGCTGAACATCTCCGTGGCCACGGTGAAGAGCCATGCCTGCACGCTCTACCAGCGGCTCAAGGTCCGCAACAAGGG
CGAGGCCGTCTACGCCGCCCTGCAGCGCGGCGCCACGCTGGAATGGGTCAGCGGCGACGAGCGCGTGACGCGGGACAGCA
GCATGCGCCCGGTAGTTGCGCGCCACAGCGAAACGGCCGTCTACGAGGCCGCCAGCCCGACGATCTGA

Upstream 100 bases:

>100_bases
AGGGCAGTCAGCGGGCCGCAGCAGCGCGTCCGCTTGCCATGCAATGTCTCCCCATACGCAAAGCGCCCGCATTCCCTCCC
GAGTAACGGGGAGTGAAACA

Downstream 100 bases:

>100_bases
ACGTCAGCACCAGCGCCGCGCCCGCGTGACAAGACGGGCCGGCGCTGCCCCGGGCATCCCGGGACCGAGGGGTCAGCCAT
GCCAGCCAGCACTTTCCTGC

Product: regulatory protein LuxR

Products: NA

Alternate protein names: Two Component Transcriptional Regulator LuxR Family; Response Regulator; LuxR Family Regulatory Protein; Regulatory Protein LuxR; Transcriptional Regulator Luxr Family; Transcriptional Regulator LuxR Family; Transcription Regulator Protein; Negative Regulator Of Exopolysaccharide Production Protein; Transcription Regulator LuxR Family

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNALLIEEHPLLRLGLLQMLENIQDSGHVAALAPDELGRNDNVPHNADLLVFGMPADTRIGWGQLQVARELLSPQRILIL
ADQLPLHMPDADSARSVCGCLPKSASLAVIEAAIRLAVSAVQGLLFSAEIGTMPSASRPALPVTQSLASAAPLPPTAQAD
PLSSLATCASAPRGALRSSVAVRDLTGLRPGQPLSGSSRPSEPPADAEPSYDEAEMLKITPRQYEVLVLLARGYPIKTVS
RMLNISVATVKSHACTLYQRLKVRNKGEAVYAALQRGATLEWVSGDERVTRDSSMRPVVARHSETAVYEAASPTI

Sequences:

>Translated_315_residues
MNALLIEEHPLLRLGLLQMLENIQDSGHVAALAPDELGRNDNVPHNADLLVFGMPADTRIGWGQLQVARELLSPQRILIL
ADQLPLHMPDADSARSVCGCLPKSASLAVIEAAIRLAVSAVQGLLFSAEIGTMPSASRPALPVTQSLASAAPLPPTAQAD
PLSSLATCASAPRGALRSSVAVRDLTGLRPGQPLSGSSRPSEPPADAEPSYDEAEMLKITPRQYEVLVLLARGYPIKTVS
RMLNISVATVKSHACTLYQRLKVRNKGEAVYAALQRGATLEWVSGDERVTRDSSMRPVVARHSETAVYEAASPTI
>Mature_315_residues
MNALLIEEHPLLRLGLLQMLENIQDSGHVAALAPDELGRNDNVPHNADLLVFGMPADTRIGWGQLQVARELLSPQRILIL
ADQLPLHMPDADSARSVCGCLPKSASLAVIEAAIRLAVSAVQGLLFSAEIGTMPSASRPALPVTQSLASAAPLPPTAQAD
PLSSLATCASAPRGALRSSVAVRDLTGLRPGQPLSGSSRPSEPPADAEPSYDEAEMLKITPRQYEVLVLLARGYPIKTVS
RMLNISVATVKSHACTLYQRLKVRNKGEAVYAALQRGATLEWVSGDERVTRDSSMRPVVARHSETAVYEAASPTI

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33551; Mature: 33551

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALLIEEHPLLRLGLLQMLENIQDSGHVAALAPDELGRNDNVPHNADLLVFGMPADTRI
CCCEEECCCCHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCCCCCCCEEEEECCCCCCC
GWGQLQVARELLSPQRILILADQLPLHMPDADSARSVCGCLPKSASLAVIEAAIRLAVSA
CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQGLLFSAEIGTMPSASRPALPVTQSLASAAPLPPTAQADPLSSLATCASAPRGALRSSV
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
AVRDLTGLRPGQPLSGSSRPSEPPADAEPSYDEAEMLKITPRQYEVLVLLARGYPIKTVS
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHH
RMLNISVATVKSHACTLYQRLKVRNKGEAVYAALQRGATLEWVSGDERVTRDSSMRPVVA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHH
RHSETAVYEAASPTI
CCCCCEEECCCCCCC
>Mature Secondary Structure
MNALLIEEHPLLRLGLLQMLENIQDSGHVAALAPDELGRNDNVPHNADLLVFGMPADTRI
CCCEEECCCCHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCCCCCCCEEEEECCCCCCC
GWGQLQVARELLSPQRILILADQLPLHMPDADSARSVCGCLPKSASLAVIEAAIRLAVSA
CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQGLLFSAEIGTMPSASRPALPVTQSLASAAPLPPTAQADPLSSLATCASAPRGALRSSV
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
AVRDLTGLRPGQPLSGSSRPSEPPADAEPSYDEAEMLKITPRQYEVLVLLARGYPIKTVS
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHH
RMLNISVATVKSHACTLYQRLKVRNKGEAVYAALQRGATLEWVSGDERVTRDSSMRPVVA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHH
RHSETAVYEAASPTI
CCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA