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The map label for this gene is yfbE [C]

Identifier: 73539199

GI number: 73539199

Start: 2160704

End: 2161900

Strand: Direct

Name: yfbE [C]

Synonym: Reut_B5377

Alternate gene names: 73539199

Gene position: 2160704-2161900 (Clockwise)

Preceding gene: 73539193

Following gene: 73539200

Centisome position: 79.26

GC content: 60.4

Gene sequence:

>1197_bases
ATGCTGGACACGCAATTTTCACCCTGGCCGAGTTTCACTGCCGAAGAAGCTGAAGCGGTTGGCCAGGTGCTCTTGTCCAA
TCGCGTGAATTACTGGACCGGGACAGAGTGTCGTCAGTTTGAATCCGAGTTTGCGGCCTGGTCGGGCGCAAGGTATGCAA
TTGCCCTGGCCAATGGCACGTTGGCGCTGGACCTTGCGCTCAAGGCCCTTGACATCGGCTTGGGCGATGAAGTCATCGTG
ACGCCACGGACTTTCATCGCCAGCATATCGTGCGTGGTCAATGCTGGCGCGACTCCGGTGTTTGCCGATGTGGATGAAGA
CAGCGGGAACATTTGCGCAGCAACGATCGCGCCGGCAATTACCACACGTACCAAAGCCATCCTGTGTGTGCATCTGGCGG
GATTGCCCTGCGAGATGGATGAAATCATGGCGCTGGCCCGAGCGCATGGGCTGAAGGTGGTCGAGGATTGCGCTCAGGCC
CACGGCGCCCGATACAAGGGGCAATCGGTGGGCACGATCGGTGACATCGGCGCATGGTCCTTCTGTCAAGACAAGATCAT
GACCACGGGCGGTGAAGGTGGCATGGTGACGACGAACGACAGGGAATTGTGGTCGCGCATGTGGTCATTCAAGGATCATG
GCAAGAGCTGGGAGGCCGTCTACGAGCGCGATCACCCGCCCGGGTTCCGCTGGGTCCACGACTCGTTCGGCACGAACTGG
CGCATGATGGAAATTCAGGCGGCGATCGGCCGTATTCAGCTTGGCCGGATGCCGCAATGGCATGCGCGACGCACGGATAA
CGCAGCGATGCTGACGGAGGCTTTGAAGTCATGTTCGGCATTGAGGCTGCCCGAGCATCCCTCCCATATGCAGCACGCCT
GGTACAAGTTCTACGCCTTCGTGCGTCCCGAAGCATTACGCGATGGGTGGACAAGGGATCGGATGATTGCGGAAATCCAT
GCACAGGGCGTTCCGTGCTATGCCGGGAGTTGCTCGGAGGTCTATCTCGAGAAGGCGTTCGAGAGTACCGGATTGAGACC
TCGGCACAGGCTGCCTGCTGCCCGGGCGCTTGGCGAAACCAGCCTCATGTTCCTGGTGCATCCCACGCTGACGGAAGCGC
AGATGCGCAAGACCGCAGAAGTCGCCTCGCGGGTAGCATCGCAGGCAGTGGCCTGCGGTGCGCCGGTGGACGGGTGA

Upstream 100 bases:

>100_bases
AACTGAAGTGCTGTGGCTGCCGGAAGCCTTGTCACAGACGAAGAAGCCTCACTGCGGAGCAGGTAGACGCTGCGTTGATA
GGAACGATGGAGAGGATCCT

Downstream 100 bases:

>100_bases
TGTGATGGGCGCCGCGATCTGCGTTGCATGCATCGTTGGGTCGCGACCGCGATAGCGGACTGCCATTCCGCGTCCTGCGG
CGGTCCGTAGATTAATGTCT

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLDTQFSPWPSFTAEEAEAVGQVLLSNRVNYWTGTECRQFESEFAAWSGARYAIALANGTLALDLALKALDIGLGDEVIV
TPRTFIASISCVVNAGATPVFADVDEDSGNICAATIAPAITTRTKAILCVHLAGLPCEMDEIMALARAHGLKVVEDCAQA
HGARYKGQSVGTIGDIGAWSFCQDKIMTTGGEGGMVTTNDRELWSRMWSFKDHGKSWEAVYERDHPPGFRWVHDSFGTNW
RMMEIQAAIGRIQLGRMPQWHARRTDNAAMLTEALKSCSALRLPEHPSHMQHAWYKFYAFVRPEALRDGWTRDRMIAEIH
AQGVPCYAGSCSEVYLEKAFESTGLRPRHRLPAARALGETSLMFLVHPTLTEAQMRKTAEVASRVASQAVACGAPVDG

Sequences:

>Translated_398_residues
MLDTQFSPWPSFTAEEAEAVGQVLLSNRVNYWTGTECRQFESEFAAWSGARYAIALANGTLALDLALKALDIGLGDEVIV
TPRTFIASISCVVNAGATPVFADVDEDSGNICAATIAPAITTRTKAILCVHLAGLPCEMDEIMALARAHGLKVVEDCAQA
HGARYKGQSVGTIGDIGAWSFCQDKIMTTGGEGGMVTTNDRELWSRMWSFKDHGKSWEAVYERDHPPGFRWVHDSFGTNW
RMMEIQAAIGRIQLGRMPQWHARRTDNAAMLTEALKSCSALRLPEHPSHMQHAWYKFYAFVRPEALRDGWTRDRMIAEIH
AQGVPCYAGSCSEVYLEKAFESTGLRPRHRLPAARALGETSLMFLVHPTLTEAQMRKTAEVASRVASQAVACGAPVDG
>Mature_398_residues
MLDTQFSPWPSFTAEEAEAVGQVLLSNRVNYWTGTECRQFESEFAAWSGARYAIALANGTLALDLALKALDIGLGDEVIV
TPRTFIASISCVVNAGATPVFADVDEDSGNICAATIAPAITTRTKAILCVHLAGLPCEMDEIMALARAHGLKVVEDCAQA
HGARYKGQSVGTIGDIGAWSFCQDKIMTTGGEGGMVTTNDRELWSRMWSFKDHGKSWEAVYERDHPPGFRWVHDSFGTNW
RMMEIQAAIGRIQLGRMPQWHARRTDNAAMLTEALKSCSALRLPEHPSHMQHAWYKFYAFVRPEALRDGWTRDRMIAEIH
AQGVPCYAGSCSEVYLEKAFESTGLRPRHRLPAARALGETSLMFLVHPTLTEAQMRKTAEVASRVASQAVACGAPVDG

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=352, Percent_Identity=31.8181818181818, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI2367285, Length=251, Percent_Identity=37.4501992031873, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43709; Mature: 43709

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDTQFSPWPSFTAEEAEAVGQVLLSNRVNYWTGTECRQFESEFAAWSGARYAIALANGT
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCC
LALDLALKALDIGLGDEVIVTPRTFIASISCVVNAGATPVFADVDEDSGNICAATIAPAI
EEEEEHHHHHHCCCCCCEEECCHHHHHHHHHHEECCCCCEEEECCCCCCCEEEEEHHHHH
TTRTKAILCVHLAGLPCEMDEIMALARAHGLKVVEDCAQAHGARYKGQSVGTIGDIGAWS
HHHHHEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
FCQDKIMTTGGEGGMVTTNDRELWSRMWSFKDHGKSWEAVYERDHPPGFRWVHDSFGTNW
HHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCCE
RMMEIQAAIGRIQLGRMPQWHARRTDNAAMLTEALKSCSALRLPEHPSHMQHAWYKFYAF
EEEEEHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
VRPEALRDGWTRDRMIAEIHAQGVPCYAGSCSEVYLEKAFESTGLRPRHRLPAARALGET
CCCHHHHCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCHHCCCHHHHCCCC
SLMFLVHPTLTEAQMRKTAEVASRVASQAVACGAPVDG
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLDTQFSPWPSFTAEEAEAVGQVLLSNRVNYWTGTECRQFESEFAAWSGARYAIALANGT
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCC
LALDLALKALDIGLGDEVIVTPRTFIASISCVVNAGATPVFADVDEDSGNICAATIAPAI
EEEEEHHHHHHCCCCCCEEECCHHHHHHHHHHEECCCCCEEEECCCCCCCEEEEEHHHHH
TTRTKAILCVHLAGLPCEMDEIMALARAHGLKVVEDCAQAHGARYKGQSVGTIGDIGAWS
HHHHHEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
FCQDKIMTTGGEGGMVTTNDRELWSRMWSFKDHGKSWEAVYERDHPPGFRWVHDSFGTNW
HHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCCE
RMMEIQAAIGRIQLGRMPQWHARRTDNAAMLTEALKSCSALRLPEHPSHMQHAWYKFYAF
EEEEEHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
VRPEALRDGWTRDRMIAEIHAQGVPCYAGSCSEVYLEKAFESTGLRPRHRLPAARALGET
CCCHHHHCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCHHCCCHHHHCCCC
SLMFLVHPTLTEAQMRKTAEVASRVASQAVACGAPVDG
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]