Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is 73539185
Identifier: 73539185
GI number: 73539185
Start: 2140899
End: 2143460
Strand: Direct
Name: 73539185
Synonym: Reut_B5363
Alternate gene names: NA
Gene position: 2140899-2143460 (Clockwise)
Preceding gene: 73539184
Following gene: 73539187
Centisome position: 78.53
GC content: 66.12
Gene sequence:
>2562_bases ATGAAGCTGCAGACTTGCCTGGATGCAAGCCTTGCCGCGCCTGGCAGGCAATCCCCGCGCATTGAGCGCCCGGGGATTGC CGTAGTCGATGCCGCGCTGCAAGGCGAGTGGACGTGGACCCAGACCCCTCCCGGTGCCGCAGACAGTCCCGCGGCATTGA GCCCGGGGCTGGCATGGCTGCCTGCCCCCGTGCCGGGCACTGTCGCCAGCGCCCTGCGCGCAGCGGGGCGCTGGGACGAC GCTGCGCCGCTGCCGTTGCACGTACATGACCATTGGTATCGGGTTGTCTTTACCGGCGACGGCCGGCGCGTGCTGCGTTT CAACGGCCTGGCCACGCTCGCCGAAGTCTGGCTGAACGGCAGGCTTGTGCTGAGCACACGGCACATGTTCGTTGCCCACG AGGTTGAGGTGGATCTGGCCGGCAGCAATCTGCTTCATCTCTGCTTCCGGGCGCTCGATCCATGGCTGCGCAGGCAGCGG GGCCCGGTACGATGGAAGCCCCGCATGATCGTGCCGCCGCAGTTGCGGACCGTGCGCGCGACGCTGCTTGGCCATATGCC GGGATGGTGCCCGCCGGTTCATGCTGTCGGACCGTGGCGGCCCGTTGAACTGCTTGACCCCACGGGCAGCGACATCCTGC ATGGCTTGCGGGCAGACCTGTGGGCGCGGCTGCACGAGCAGGATGGCGAGGTGTCGGTGCGCCTGCATTTTGCTGCGTCG GCGCCTGCCACCGGCGCCGTGGAGCTCAGCGACGAAGCCGGCTGCCAGGGTCAGGCCGCGCTGGTTCGTATCGACCGGCA CACGCTTGAAGGCACCATCCATGTCGAGCGCCCGCGGTTATGGTGGCCGCATACGCATGGCGAACCAAGCCTCTATCGTG TCGATGCCACCATCGACGGTCGTTCGATCCCTTGCGGACGTGTCGGCTTTCGCAGTGTGTCAACGGAGTGCCCGGCAGAA GCCGGAGCGTTCACGCTGCGCATCAACGGCGAACGGCTGTTCTGCCGAGGTGCCTGCTTTTCCAGCATCGATCTCACGGG GCTGGCGGATACCGACCAGGCGTCGAGGCGCTGGCTCGAACTCGCACGCGCGGGCGGCATGAACATGGTCCGCATCAGCG GCGTGACATGCTATCCGGGTGAAGCCTTTTATCGCAACTGCGATGAACTCGGACTGCTGGTCTGGCAGGACTTCATGTTC GCCAATTTCGACTACGGCAGTATTGGGCCGGGTGTTGGCCTCACCGAAGATGCGACGCGCGAAGTTGGCGAGTGGCTGGC ATCGACGCGGGCCCATCCGAGCATTGCGGTGGCCTGTGGCGGCAGTGAAGCGGAGCAGCAAGCCGCGATGCTCGGCACCT CGCGCAGCGAATGGAAGCAGCCTTTGTTCGACACGTTGATTCCGCAGCTCGTTGCGGCTCATCGACCAGATATCGTGTAT GTCGGCAATTCGCCCAACGGCGGCGCATGGCCATTCCAGCCCGATGGCGGGGTCAGCCACTATTACGGCGTAGGCGCCTA TGAGCGTCCGCTCGCGGATGCCCGCCTGGCCCAGGTACGGTTCGCATCGGAATGTCTGGCCTTCTCCAACGTGCCGTGTG ACCGCACGCTTGCGGAGATGGGGACGCCGCCGCTGCATTCGCCGCGCTGGAAGGCCACGGTGCCGCGCGACGCCGGCGCG CCGTGGGATTTCGAGGACGTGCGCGATCACTACCTGCGTACGCTTTACGATGTCGATCCGTCGCGTCTGCGCTATGAGCA GCCGCAGCGTTACCTGATACTGTCGCGCGCGGTGGTCGCCGAGGTGATGAGCGATGTGTTCGCCGAATGGCGGCGCGTCG GCTCCGGTTGCGCGGGCGGCCTGATCTGGCAATTCCAGGATCTGGTGCCCGGTGCGGGCTGGGGTATCGTCGATGCACGC GGGCGTCCAAAATCGGCGTGGCATGCATTGCAGCAGGCGTGGCAACCGCTGCAGGTGCTCATCACCGACGAAGGCCTCAA CGGGCTGCACCTGCACGTGCTCAACGAGACGCCGCAGCCGCGCCGGTTGTTGCTGGAGCTGTGTTGCCTGCGTGACGGCG AGATCGTCGTGGAGAAGGTCCGGCATTCTCTTCGGTTGCCGGCTCACGGCGCGGAACGCGTGGAAGCCGCCGCGCTGCTC GATCGCTTTGTCGACTTCACCTATGCGTACCGCTTCGGTCCGCCGTCGCACGACGTGGTGATCGCGACGCTGATGGACGA GAACGGCGGCGAGCCGCTGAGCCAGGCCGTGTACCTGCCTGACCGCCGCGCGGCCGCGCTGAAGCCGCCTGAACTGCAGG CGCAGGTCGAACGTGTGGATGACGACTGGTGGCTGACCATCACAGCCCGCCGTTTTGCACGTTGGGTACACATCGAGGAC CACGCCTATCAGGCCACCGAGAACTGGTTTCATCTTGGCCCGGGATGCAGCCGGCGCGTGCGCCTCATGCGGGATAGCGC AGACACAAGCCAGGTCGATGCGGTGCCGTCAGGAGAGATCTACGCCGTCAACGCCGAGCGCTCGCTGGGCTACGACGGCT GA
Upstream 100 bases:
>100_bases TGCTGCGCCACCATGGCTTTGAACTGGCGAAATGGCCCAAGCGAGTGCGTGAAGTGCTCGGAGGCCTCTGACCCCTCTGA CGCGCCGCCGAGACGGTCTC
Downstream 100 bases:
>100_bases TTGTGGGCTCATTGTGGGCTGATTGTGGCGACATCAGGGACGTCGCCGGTGTTTGCCTGGCGCCGTCTGCCTATGCGGCA GCAAGCCGTGTGTCACCGAA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Glycoside Hydrolase; Mannosidase; Glycoside Hydrolase Family 2 Protein; Glycosidase; Glycoside Hydrolase Family 2 TIM Barrel; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; O-Glycosyl Hydrolase; Beta-Galactosidase; Family 2 Glycosyl Hydrolase; Beta-Mannosidase Man2A; Mannosylglycoprotein Endo-Beta-Mannosidase; Beta-Mannosidase-Related Protein; BETA-Mannosidase Protein; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 853; Mature: 853
Protein sequence:
>853_residues MKLQTCLDASLAAPGRQSPRIERPGIAVVDAALQGEWTWTQTPPGAADSPAALSPGLAWLPAPVPGTVASALRAAGRWDD AAPLPLHVHDHWYRVVFTGDGRRVLRFNGLATLAEVWLNGRLVLSTRHMFVAHEVEVDLAGSNLLHLCFRALDPWLRRQR GPVRWKPRMIVPPQLRTVRATLLGHMPGWCPPVHAVGPWRPVELLDPTGSDILHGLRADLWARLHEQDGEVSVRLHFAAS APATGAVELSDEAGCQGQAALVRIDRHTLEGTIHVERPRLWWPHTHGEPSLYRVDATIDGRSIPCGRVGFRSVSTECPAE AGAFTLRINGERLFCRGACFSSIDLTGLADTDQASRRWLELARAGGMNMVRISGVTCYPGEAFYRNCDELGLLVWQDFMF ANFDYGSIGPGVGLTEDATREVGEWLASTRAHPSIAVACGGSEAEQQAAMLGTSRSEWKQPLFDTLIPQLVAAHRPDIVY VGNSPNGGAWPFQPDGGVSHYYGVGAYERPLADARLAQVRFASECLAFSNVPCDRTLAEMGTPPLHSPRWKATVPRDAGA PWDFEDVRDHYLRTLYDVDPSRLRYEQPQRYLILSRAVVAEVMSDVFAEWRRVGSGCAGGLIWQFQDLVPGAGWGIVDAR GRPKSAWHALQQAWQPLQVLITDEGLNGLHLHVLNETPQPRRLLLELCCLRDGEIVVEKVRHSLRLPAHGAERVEAAALL DRFVDFTYAYRFGPPSHDVVIATLMDENGGEPLSQAVYLPDRRAAALKPPELQAQVERVDDDWWLTITARRFARWVHIED HAYQATENWFHLGPGCSRRVRLMRDSADTSQVDAVPSGEIYAVNAERSLGYDG
Sequences:
>Translated_853_residues MKLQTCLDASLAAPGRQSPRIERPGIAVVDAALQGEWTWTQTPPGAADSPAALSPGLAWLPAPVPGTVASALRAAGRWDD AAPLPLHVHDHWYRVVFTGDGRRVLRFNGLATLAEVWLNGRLVLSTRHMFVAHEVEVDLAGSNLLHLCFRALDPWLRRQR GPVRWKPRMIVPPQLRTVRATLLGHMPGWCPPVHAVGPWRPVELLDPTGSDILHGLRADLWARLHEQDGEVSVRLHFAAS APATGAVELSDEAGCQGQAALVRIDRHTLEGTIHVERPRLWWPHTHGEPSLYRVDATIDGRSIPCGRVGFRSVSTECPAE AGAFTLRINGERLFCRGACFSSIDLTGLADTDQASRRWLELARAGGMNMVRISGVTCYPGEAFYRNCDELGLLVWQDFMF ANFDYGSIGPGVGLTEDATREVGEWLASTRAHPSIAVACGGSEAEQQAAMLGTSRSEWKQPLFDTLIPQLVAAHRPDIVY VGNSPNGGAWPFQPDGGVSHYYGVGAYERPLADARLAQVRFASECLAFSNVPCDRTLAEMGTPPLHSPRWKATVPRDAGA PWDFEDVRDHYLRTLYDVDPSRLRYEQPQRYLILSRAVVAEVMSDVFAEWRRVGSGCAGGLIWQFQDLVPGAGWGIVDAR GRPKSAWHALQQAWQPLQVLITDEGLNGLHLHVLNETPQPRRLLLELCCLRDGEIVVEKVRHSLRLPAHGAERVEAAALL DRFVDFTYAYRFGPPSHDVVIATLMDENGGEPLSQAVYLPDRRAAALKPPELQAQVERVDDDWWLTITARRFARWVHIED HAYQATENWFHLGPGCSRRVRLMRDSADTSQVDAVPSGEIYAVNAERSLGYDG >Mature_853_residues MKLQTCLDASLAAPGRQSPRIERPGIAVVDAALQGEWTWTQTPPGAADSPAALSPGLAWLPAPVPGTVASALRAAGRWDD AAPLPLHVHDHWYRVVFTGDGRRVLRFNGLATLAEVWLNGRLVLSTRHMFVAHEVEVDLAGSNLLHLCFRALDPWLRRQR GPVRWKPRMIVPPQLRTVRATLLGHMPGWCPPVHAVGPWRPVELLDPTGSDILHGLRADLWARLHEQDGEVSVRLHFAAS APATGAVELSDEAGCQGQAALVRIDRHTLEGTIHVERPRLWWPHTHGEPSLYRVDATIDGRSIPCGRVGFRSVSTECPAE AGAFTLRINGERLFCRGACFSSIDLTGLADTDQASRRWLELARAGGMNMVRISGVTCYPGEAFYRNCDELGLLVWQDFMF ANFDYGSIGPGVGLTEDATREVGEWLASTRAHPSIAVACGGSEAEQQAAMLGTSRSEWKQPLFDTLIPQLVAAHRPDIVY VGNSPNGGAWPFQPDGGVSHYYGVGAYERPLADARLAQVRFASECLAFSNVPCDRTLAEMGTPPLHSPRWKATVPRDAGA PWDFEDVRDHYLRTLYDVDPSRLRYEQPQRYLILSRAVVAEVMSDVFAEWRRVGSGCAGGLIWQFQDLVPGAGWGIVDAR GRPKSAWHALQQAWQPLQVLITDEGLNGLHLHVLNETPQPRRLLLELCCLRDGEIVVEKVRHSLRLPAHGAERVEAAALL DRFVDFTYAYRFGPPSHDVVIATLMDENGGEPLSQAVYLPDRRAAALKPPELQAQVERVDDDWWLTITARRFARWVHIED HAYQATENWFHLGPGCSRRVRLMRDSADTSQVDAVPSGEIYAVNAERSLGYDG
Specific function: Unknown
COG id: COG3250
COG function: function code G; Beta-galactosidase/beta-glucuronidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI84798622, Length=663, Percent_Identity=22.6244343891403, Blast_Score=112, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17550784, Length=488, Percent_Identity=23.9754098360656, Blast_Score=90, Evalue=5e-18, Organism=Drosophila melanogaster, GI24643838, Length=635, Percent_Identity=23.7795275590551, Blast_Score=103, Evalue=6e-22, Organism=Drosophila melanogaster, GI24643840, Length=453, Percent_Identity=24.0618101545254, Blast_Score=90, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94363; Mature: 94363
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQTCLDASLAAPGRQSPRIERPGIAVVDAALQGEWTWTQTPPGAADSPAALSPGLAWL CCCHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHCCCEEECCCCCCCCCCCCCCCCCCEEC PAPVPGTVASALRAAGRWDDAAPLPLHVHDHWYRVVFTGDGRRVLRFNGLATLAEVWLNG CCCCCHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEECCCCEEEEECCHHHHHHHHHCC RLVLSTRHMFVAHEVEVDLAGSNLLHLCFRALDPWLRRQRGPVRWKPRMIVPPQLRTVRA EEEEEECEEEEEEEEEEEECCCHHHHHHHHHHCHHHHHCCCCCCCCCEEECCCCHHHHHH TLLGHMPGWCPPVHAVGPWRPVELLDPTGSDILHGLRADLWARLHEQDGEVSVRLHFAAS HHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC APATGAVELSDEAGCQGQAALVRIDRHTLEGTIHVERPRLWWPHTHGEPSLYRVDATIDG CCCCCEEEECCCCCCCCCEEEEEEECEEECEEEEEECCEEECCCCCCCCCEEEEEEEECC RSIPCGRVGFRSVSTECPAEAGAFTLRINGERLFCRGACFSSIDLTGLADTDQASRRWLE CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH LARAGGMNMVRISGVTCYPGEAFYRNCDELGLLVWQDFMFANFDYGSIGPGVGLTEDATR HHHHCCCEEEEEECEEECCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH EVGEWLASTRAHPSIAVACGGSEAEQQAAMLGTSRSEWKQPLFDTLIPQLVAAHRPDIVY HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEE VGNSPNGGAWPFQPDGGVSHYYGVGAYERPLADARLAQVRFASECLAFSNVPCDRTLAEM ECCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHC GTPPLHSPRWKATVPRDAGAPWDFEDVRDHYLRTLYDVDPSRLRYEQPQRYLILSRAVVA CCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCEEHHHHHHHH EVMSDVFAEWRRVGSGCAGGLIWQFQDLVPGAGWGIVDARGRPKSAWHALQQAWQPLQVL HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEE ITDEGLNGLHLHVLNETPQPRRLLLELCCLRDGEIVVEKVRHSLRLPAHGAERVEAAALL EECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH DRFVDFTYAYRFGPPSHDVVIATLMDENGGEPLSQAVYLPDRRAAALKPPELQAQVERVD HHHHHHHEEEECCCCCCCEEEEEEECCCCCCCHHHEEECCCCCCCCCCCHHHHHHHHHCC DDWWLTITARRFARWVHIEDHAYQATENWFHLGPGCSRRVRLMRDSADTSQVDAVPSGEI CCEEEEEEEHHHEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCE YAVNAERSLGYDG EEEECCCCCCCCC >Mature Secondary Structure MKLQTCLDASLAAPGRQSPRIERPGIAVVDAALQGEWTWTQTPPGAADSPAALSPGLAWL CCCHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHCCCEEECCCCCCCCCCCCCCCCCCEEC PAPVPGTVASALRAAGRWDDAAPLPLHVHDHWYRVVFTGDGRRVLRFNGLATLAEVWLNG CCCCCHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEECCCCEEEEECCHHHHHHHHHCC RLVLSTRHMFVAHEVEVDLAGSNLLHLCFRALDPWLRRQRGPVRWKPRMIVPPQLRTVRA EEEEEECEEEEEEEEEEEECCCHHHHHHHHHHCHHHHHCCCCCCCCCEEECCCCHHHHHH TLLGHMPGWCPPVHAVGPWRPVELLDPTGSDILHGLRADLWARLHEQDGEVSVRLHFAAS HHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC APATGAVELSDEAGCQGQAALVRIDRHTLEGTIHVERPRLWWPHTHGEPSLYRVDATIDG CCCCCEEEECCCCCCCCCEEEEEEECEEECEEEEEECCEEECCCCCCCCCEEEEEEEECC RSIPCGRVGFRSVSTECPAEAGAFTLRINGERLFCRGACFSSIDLTGLADTDQASRRWLE CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH LARAGGMNMVRISGVTCYPGEAFYRNCDELGLLVWQDFMFANFDYGSIGPGVGLTEDATR HHHHCCCEEEEEECEEECCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH EVGEWLASTRAHPSIAVACGGSEAEQQAAMLGTSRSEWKQPLFDTLIPQLVAAHRPDIVY HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEE VGNSPNGGAWPFQPDGGVSHYYGVGAYERPLADARLAQVRFASECLAFSNVPCDRTLAEM ECCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHC GTPPLHSPRWKATVPRDAGAPWDFEDVRDHYLRTLYDVDPSRLRYEQPQRYLILSRAVVA CCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCEEHHHHHHHH EVMSDVFAEWRRVGSGCAGGLIWQFQDLVPGAGWGIVDARGRPKSAWHALQQAWQPLQVL HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEE ITDEGLNGLHLHVLNETPQPRRLLLELCCLRDGEIVVEKVRHSLRLPAHGAERVEAAALL EECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH DRFVDFTYAYRFGPPSHDVVIATLMDENGGEPLSQAVYLPDRRAAALKPPELQAQVERVD HHHHHHHEEEECCCCCCCEEEEEEECCCCCCCHHHEEECCCCCCCCCCCHHHHHHHHHCC DDWWLTITARRFARWVHIEDHAYQATENWFHLGPGCSRRVRLMRDSADTSQVDAVPSGEI CCEEEEEEEHHHEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCE YAVNAERSLGYDG EEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA