| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is benE [H]
Identifier: 73539173
GI number: 73539173
Start: 2126767
End: 2127984
Strand: Direct
Name: benE [H]
Synonym: Reut_B5351
Alternate gene names: 73539173
Gene position: 2126767-2127984 (Clockwise)
Preceding gene: 73539172
Following gene: 73539174
Centisome position: 78.01
GC content: 66.67
Gene sequence:
>1218_bases ATGCCAGAACCCCTCATCTCTCCGGCTCCGCAACACCATGCGGATCGCGCCGGCAATCCACTGTCGCTCTCCGCGATCAC GGCAGGTTTCCTCGCGGTCCTGATTTCGTATTCCGGCCCGCTGGTGATCTTTTTTCAGGCCGCGCACGCTGCCAACCTGC CCGCCGACATGGTCACGTCATGGGTGTGGGGGATTTCGATCGGTGCTGGCGTTTCGGGGCTGCTGCTGAGCGCGTGGCTC CGTGTGCCAATCATCACCGCGTGGTCCGCGCCCGGGACGGCGCTGCTGGTGACGCTGTTTCCGCAGATGAGCCTTGCGGA CGCGGTGGGGGCTTACGTGAGCGCCGCGGCGATCCTGTTCGTGATCGGGATCTCCGGCAGTTTCGACTGGCTCGTGCAAC GGATCCCGCGCGGCATCGCGGCCGGCATGATGGCGGGCATCCTGTTCCAGTTCGGTGCGGGCGCATTCAAGGCGGCGGGA ACCATGCCGCTGCTGGCGGGCGTGATGATCGCTACGTATCTCGTGTGCCGGCGCTGGCTGCAGCGCTATTGCATGGTGGT GGTGCTGGCCGTGGGTGTCGCGACGGCTGCGGCGCTGGGGCTCACGCATGCGGGCGATCTGCATCTGGCCGTTGCGAGGC CGGTGTTCATCGCGCCGCACTGGTCGCTGAGCGCGACGCTGAGTCTTGCCATTCCGCTGGTGATCGTGAGCCTGACAGGG CAGTTCCTGCCCGGCATGGCAATCCTGCGCCTGTCCGGGTACCACACGCCGGCACGGCCCATTCTTGCGGCGACCAGCCT GGCCAGTGCCGCGGTCGCGTGCTTCGGCGGCATCACCATCGTGACGGCTGCCATCACTGCCGCGCTGTGCACGGGCAAGG ACGCACATGAAGACCCTGCGCGCCGCTATGTGGCCGGCGTTGCCAATGGCGTGTTCTATCTCGTGGGCGGGACCTTCGCG GGCACCATCGTGCTGCTGTTCGATGCCTTGCCCCACGCCTTTGTCGCGATCCTGGCCGGGCTCGCGCTGATCGGTGCCAT CATGTCCAACGTGATGGAGGCCATCACGCAGGACGATCACCGCGAAGCGTCGGTCATCACGTTCCTGGCCACGGCCTCGG GCATGACCATGTTCGGTCTGGGCTCTGCGTTCTGGGGAATCGCGATCGGCAGCGCGGCCTGGTGCATCCTCCACGGGAAG CGATCCGCCGCGCGTTGA
Upstream 100 bases:
>100_bases CATGGGTTGCACCGTCAGTGCGGCGCAGCCCAGGAATAACATCCGGCCCCCGTGTTGGGCCAGAACGGAGACAGGAAGGC CCACCGCCTTCAATCGCCCT
Downstream 100 bases:
>100_bases CGCTTGCTGGCGTCAGCCAGTGCACGGCGACAGTGTGGGCGCCAATTTCACTGACTCCCATGAGCACGCCCCTTCCTTTC GCTTCGCTGGCATGAACGTC
Product: benzoate membrane transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MPEPLISPAPQHHADRAGNPLSLSAITAGFLAVLISYSGPLVIFFQAAHAANLPADMVTSWVWGISIGAGVSGLLLSAWL RVPIITAWSAPGTALLVTLFPQMSLADAVGAYVSAAAILFVIGISGSFDWLVQRIPRGIAAGMMAGILFQFGAGAFKAAG TMPLLAGVMIATYLVCRRWLQRYCMVVVLAVGVATAAALGLTHAGDLHLAVARPVFIAPHWSLSATLSLAIPLVIVSLTG QFLPGMAILRLSGYHTPARPILAATSLASAAVACFGGITIVTAAITAALCTGKDAHEDPARRYVAGVANGVFYLVGGTFA GTIVLLFDALPHAFVAILAGLALIGAIMSNVMEAITQDDHREASVITFLATASGMTMFGLGSAFWGIAIGSAAWCILHGK RSAAR
Sequences:
>Translated_405_residues MPEPLISPAPQHHADRAGNPLSLSAITAGFLAVLISYSGPLVIFFQAAHAANLPADMVTSWVWGISIGAGVSGLLLSAWL RVPIITAWSAPGTALLVTLFPQMSLADAVGAYVSAAAILFVIGISGSFDWLVQRIPRGIAAGMMAGILFQFGAGAFKAAG TMPLLAGVMIATYLVCRRWLQRYCMVVVLAVGVATAAALGLTHAGDLHLAVARPVFIAPHWSLSATLSLAIPLVIVSLTG QFLPGMAILRLSGYHTPARPILAATSLASAAVACFGGITIVTAAITAALCTGKDAHEDPARRYVAGVANGVFYLVGGTFA GTIVLLFDALPHAFVAILAGLALIGAIMSNVMEAITQDDHREASVITFLATASGMTMFGLGSAFWGIAIGSAAWCILHGK RSAAR >Mature_404_residues PEPLISPAPQHHADRAGNPLSLSAITAGFLAVLISYSGPLVIFFQAAHAANLPADMVTSWVWGISIGAGVSGLLLSAWLR VPIITAWSAPGTALLVTLFPQMSLADAVGAYVSAAAILFVIGISGSFDWLVQRIPRGIAAGMMAGILFQFGAGAFKAAGT MPLLAGVMIATYLVCRRWLQRYCMVVVLAVGVATAAALGLTHAGDLHLAVARPVFIAPHWSLSATLSLAIPLVIVSLTGQ FLPGMAILRLSGYHTPARPILAATSLASAAVACFGGITIVTAAITAALCTGKDAHEDPARRYVAGVANGVFYLVGGTFAG TIVLLFDALPHAFVAILAGLALIGAIMSNVMEAITQDDHREASVITFLATASGMTMFGLGSAFWGIAIGSAAWCILHGKR SAAR
Specific function: Probably involved in the transport of benzoate [H]
COG id: COG3135
COG function: function code Q; Uncharacterized protein involved in benzoate metabolism
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081909, Length=371, Percent_Identity=37.1967654986523, Blast_Score=246, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004711 [H]
Pfam domain/function: PF03594 BenE [H]
EC number: NA
Molecular weight: Translated: 41696; Mature: 41564
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPLISPAPQHHADRAGNPLSLSAITAGFLAVLISYSGPLVIFFQAAHAANLPADMVTS CCCCCCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH WVWGISIGAGVSGLLLSAWLRVPIITAWSAPGTALLVTLFPQMSLADAVGAYVSAAAILF HHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHH VIGISGSFDWLVQRIPRGIAAGMMAGILFQFGAGAFKAAGTMPLLAGVMIATYLVCRRWL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHH QRYCMVVVLAVGVATAAALGLTHAGDLHLAVARPVFIAPHWSLSATLSLAIPLVIVSLTG HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHH QFLPGMAILRLSGYHTPARPILAATSLASAAVACFGGITIVTAAITAALCTGKDAHEDPA HHCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RRYVAGVANGVFYLVGGTFAGTIVLLFDALPHAFVAILAGLALIGAIMSNVMEAITQDDH HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC REASVITFLATASGMTMFGLGSAFWGIAIGSAAWCILHGKRSAAR CCHHHHEEEHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCC >Mature Secondary Structure PEPLISPAPQHHADRAGNPLSLSAITAGFLAVLISYSGPLVIFFQAAHAANLPADMVTS CCCCCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH WVWGISIGAGVSGLLLSAWLRVPIITAWSAPGTALLVTLFPQMSLADAVGAYVSAAAILF HHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHH VIGISGSFDWLVQRIPRGIAAGMMAGILFQFGAGAFKAAGTMPLLAGVMIATYLVCRRWL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHH QRYCMVVVLAVGVATAAALGLTHAGDLHLAVARPVFIAPHWSLSATLSLAIPLVIVSLTG HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHH QFLPGMAILRLSGYHTPARPILAATSLASAAVACFGGITIVTAAITAALCTGKDAHEDPA HHCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RRYVAGVANGVFYLVGGTFAGTIVLLFDALPHAFVAILAGLALIGAIMSNVMEAITQDDH HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC REASVITFLATASGMTMFGLGSAFWGIAIGSAAWCILHGKRSAAR CCHHHHEEEHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1885518 [H]