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The map label for this gene is rbn [C]

Identifier: 73539157

GI number: 73539157

Start: 2103001

End: 2103990

Strand: Reverse

Name: rbn [C]

Synonym: Reut_B5335

Alternate gene names: 73539157

Gene position: 2103990-2103001 (Counterclockwise)

Preceding gene: 73539159

Following gene: 73539156

Centisome position: 77.18

GC content: 64.85

Gene sequence:

>990_bases
ATGACTGCTGATGAGCACAACCTGTCCGATCCAACGGACCGCCACGCCCGCCGTCCGCACTTTGGCCTGCGACGCTTCCT
GCCTGATCGCCACACCGGCCAGCGCACGGTTCGCGTGGTGGTTGCCGCGGTTCAGTCGTGGTTCGCGCACCGTGCTGCCA
GCAAGGGCGCCGCACTCTCGTTCTACATGCTGTTCTCGCTGGCCCCGATACTGGTCCTGGTGATATCGATCGCCGGCCTG
TTCTTCGGCGCAGAGGCCGCGCGCGGCGAGATTTTCGAGCAGTTGCAAGATCTGGTCGGCGAACAGGGTGCGAGTGCGAT
CCAGAGCATCCTGGCTGCCACGCATCGCGCCGGGGGCAGCGGGGTGGCCGCGATCATCGCCACCGGGATCCTGTTTGTCG
GTGCTACCAGCGCCTTTGCCGAACTCAAGAGCAGCCTGGACGATATCTGGCACGTGCCGGTGCCGGCGACGGCGGGCTGG
CAGCAACTGCTGCGCTCGCGGCTGCTCTCGTTCAGCTTGGTGCTGGTGCTGGCGTTGATGCTGCTGGTTTCGCTGATCGT
GAACGCGGCGCTTGCCGTGATCGATCGCTTCTGGGGCGCGCTGTGGACGCAGTCCTGGTTCGCGCCCGTGGCCGATGTGC
TGTCGACGCTGTTCTCGTTTGCCGTGGTGACGGCGTTGTTCGCGGTCATCTTCAAGATGCTGCCCAACGCGCGCATTGCC
TGGCGCGATGTCACCATGGGCGCGATCATCACTGCAGTGCTGTTTTCGGTCGGCAAGCGCCTGATTGGCCTTTACCTCGG
CAACAGCGCGGTGGCATCGTCGTATGGGGCCGCCGGCTCGGTCGTGGCGCTGATGCTGTGGGTGTATTACTCTGCACAGA
TCTTCTTTTTCGGCGCAGAACTGACGCGCCAGTACGCGCTGCAGTTCGGCAGCCTGCGCGGCCAGCAGGCGGATGCGTTG
CCCGGCCAGGGCGGCGAACCGGTAAAATAG

Upstream 100 bases:

>100_bases
GCGAAGTATCATGAACGCAGGTGTCGCGTCGGCTGCGGCTGCACCAGGCATGGCAGCTGGCGCCACGTTCTGTCCGTGGT
GCTGCGAAGGTCTCCCGAGC

Downstream 100 bases:

>100_bases
CGCCCCATTCCCTTTCGTGCGTGCCCGCAGTGCCGGCTCGACCGCCACCCTGCGGTCCTCGTCGTTGCCCGGTCGGCTCC
CGCATGCCGGGCCCTGCAAT

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTADEHNLSDPTDRHARRPHFGLRRFLPDRHTGQRTVRVVVAAVQSWFAHRAASKGAALSFYMLFSLAPILVLVISIAGL
FFGAEAARGEIFEQLQDLVGEQGASAIQSILAATHRAGGSGVAAIIATGILFVGATSAFAELKSSLDDIWHVPVPATAGW
QQLLRSRLLSFSLVLVLALMLLVSLIVNAALAVIDRFWGALWTQSWFAPVADVLSTLFSFAVVTALFAVIFKMLPNARIA
WRDVTMGAIITAVLFSVGKRLIGLYLGNSAVASSYGAAGSVVALMLWVYYSAQIFFFGAELTRQYALQFGSLRGQQADAL
PGQGGEPVK

Sequences:

>Translated_329_residues
MTADEHNLSDPTDRHARRPHFGLRRFLPDRHTGQRTVRVVVAAVQSWFAHRAASKGAALSFYMLFSLAPILVLVISIAGL
FFGAEAARGEIFEQLQDLVGEQGASAIQSILAATHRAGGSGVAAIIATGILFVGATSAFAELKSSLDDIWHVPVPATAGW
QQLLRSRLLSFSLVLVLALMLLVSLIVNAALAVIDRFWGALWTQSWFAPVADVLSTLFSFAVVTALFAVIFKMLPNARIA
WRDVTMGAIITAVLFSVGKRLIGLYLGNSAVASSYGAAGSVVALMLWVYYSAQIFFFGAELTRQYALQFGSLRGQQADAL
PGQGGEPVK
>Mature_328_residues
TADEHNLSDPTDRHARRPHFGLRRFLPDRHTGQRTVRVVVAAVQSWFAHRAASKGAALSFYMLFSLAPILVLVISIAGLF
FGAEAARGEIFEQLQDLVGEQGASAIQSILAATHRAGGSGVAAIIATGILFVGATSAFAELKSSLDDIWHVPVPATAGWQ
QLLRSRLLSFSLVLVLALMLLVSLIVNAALAVIDRFWGALWTQSWFAPVADVLSTLFSFAVVTALFAVIFKMLPNARIAW
RDVTMGAIITAVLFSVGKRLIGLYLGNSAVASSYGAAGSVVALMLWVYYSAQIFFFGAELTRQYALQFGSLRGQQADALP
GQGGEPVK

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=274, Percent_Identity=23.3576642335766, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 35338; Mature: 35206

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADEHNLSDPTDRHARRPHFGLRRFLPDRHTGQRTVRVVVAAVQSWFAHRAASKGAALS
CCCCCCCCCCCCHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FYMLFSLAPILVLVISIAGLFFGAEAARGEIFEQLQDLVGEQGASAIQSILAATHRAGGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
GVAAIIATGILFVGATSAFAELKSSLDDIWHVPVPATAGWQQLLRSRLLSFSLVLVLALM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLVSLIVNAALAVIDRFWGALWTQSWFAPVADVLSTLFSFAVVTALFAVIFKMLPNARIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
WRDVTMGAIITAVLFSVGKRLIGLYLGNSAVASSYGAAGSVVALMLWVYYSAQIFFFGAE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LTRQYALQFGSLRGQQADALPGQGGEPVK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TADEHNLSDPTDRHARRPHFGLRRFLPDRHTGQRTVRVVVAAVQSWFAHRAASKGAALS
CCCCCCCCCCCHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH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HHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA