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The map label for this gene is yiaJ [C]

Identifier: 73539099

GI number: 73539099

Start: 2034417

End: 2035232

Strand: Reverse

Name: yiaJ [C]

Synonym: Reut_B5276

Alternate gene names: 73539099

Gene position: 2035232-2034417 (Counterclockwise)

Preceding gene: 73539104

Following gene: 73539089

Centisome position: 74.66

GC content: 67.77

Gene sequence:

>816_bases
ATGCGCGAAGAACGAAACGACGACAAGGCGCCCGCGCGCGGCGAACGGCGCCGCCGGGTGCAGTCGGCAGTCACCGGCAT
GGCCGTGCTCAAGGGCTTGGCCAGAATGGGGGGCAGGGCGACTCTGACGGGGCTGGCCGCCCATATCGACGAAAGCCCGG
CCAAGGTCCACCGCTATCTGGTGAGCCTGGTCGAGGAAGGGCTGGTTGCCCAGGACGCCGGCGGACAGCAGTACCAGCTT
GGCGTGGAAGCACTGCATATCGGCCTGGCGGCCATGCGGCAGGCTGATCCGATCCGGCTCGCGGAGGCATCGCTGATTCG
CGTGCGCGAGCGGCATGAGGTCACCTGCTTTATCGCCGTCATGGGCAACAAGGGGCCGACCATTGTGCGTTTCGAGGAAC
CGGGACTGCCGGTGACCGTGAACGTGCGGGTGGGCTCGGTCATGCCCTTGCTATGGAGCGCCACCGGACGGGTCTTTCTG
GGATTGCTCGACGAGCGGGAAGTCCTGGCGCTGGCCCGCGCGGAGCTGGCGGCGGCGGCGCCGGACTTGCGCGCCATGCT
GGCGGCCGATGACCCGATCGGGCAACTGCGAAGGGATGTCCGGACTGCCGGCTGTGCGGCGGTACGCGATGTGAACCTGA
AGGGCATCAGCGCGGTGTCAGCGCCGGTGTTCGACTACACGGGCAGACTGAGTGCGGTACTGACCGCGCTTGGCGCCACC
GGCGGATTTGATCCGGATATCGATGGACCGATCGGCAGGGTGGTGAGGGAGGAGGCGGCGGCGGTCAGTGCGCAGCTCGG
ATATGTGCCGACCTGA

Upstream 100 bases:

>100_bases
GCGTAAATCATATACGCATTGCGTAAAAATAAGATGAGGGTTAACCTCGAAGGCAAGGAAGTCGGCGAACCGATAAACAG
ACGGTCCCCGGGAGGATGTG

Downstream 100 bases:

>100_bases
TGTTCGTGCCTGGACAGGCCGAATAACGTATCACGCAACATCGTCACGATAACGCTGTCATTCCTTGCGAGCGCTCGCCG
TCTGCGCAGACGTCTGCGGA

Product: regulatory protein IclR

Products: NA

Alternate protein names: Transcriptional Regulator IclR Family; Transcriptional Regulator; Regulatory Proteins IclR; Regulatory Protein IclR; Transcriptional Regulator Family Protein; Transcriptional Regulatory Protein; Transcription Regulator Protein; Hmg Transcriptional Repressor; Transcriptional Regulator Family; Regulator; Transcriptional Regulator IclR Family Protein; Monosaccharide Transporter; Regulatory Protein; IclR Family Regulatory Protein; Transcriptional Regulator Iclr Family; Transcriptional Regulator Protein; IclR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR IclR Family

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MREERNDDKAPARGERRRRVQSAVTGMAVLKGLARMGGRATLTGLAAHIDESPAKVHRYLVSLVEEGLVAQDAGGQQYQL
GVEALHIGLAAMRQADPIRLAEASLIRVRERHEVTCFIAVMGNKGPTIVRFEEPGLPVTVNVRVGSVMPLLWSATGRVFL
GLLDEREVLALARAELAAAAPDLRAMLAADDPIGQLRRDVRTAGCAAVRDVNLKGISAVSAPVFDYTGRLSAVLTALGAT
GGFDPDIDGPIGRVVREEAAAVSAQLGYVPT

Sequences:

>Translated_271_residues
MREERNDDKAPARGERRRRVQSAVTGMAVLKGLARMGGRATLTGLAAHIDESPAKVHRYLVSLVEEGLVAQDAGGQQYQL
GVEALHIGLAAMRQADPIRLAEASLIRVRERHEVTCFIAVMGNKGPTIVRFEEPGLPVTVNVRVGSVMPLLWSATGRVFL
GLLDEREVLALARAELAAAAPDLRAMLAADDPIGQLRRDVRTAGCAAVRDVNLKGISAVSAPVFDYTGRLSAVLTALGAT
GGFDPDIDGPIGRVVREEAAAVSAQLGYVPT
>Mature_271_residues
MREERNDDKAPARGERRRRVQSAVTGMAVLKGLARMGGRATLTGLAAHIDESPAKVHRYLVSLVEEGLVAQDAGGQQYQL
GVEALHIGLAAMRQADPIRLAEASLIRVRERHEVTCFIAVMGNKGPTIVRFEEPGLPVTVNVRVGSVMPLLWSATGRVFL
GLLDEREVLALARAELAAAAPDLRAMLAADDPIGQLRRDVRTAGCAAVRDVNLKGISAVSAPVFDYTGRLSAVLTALGAT
GGFDPDIDGPIGRVVREEAAAVSAQLGYVPT

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28773; Mature: 28773

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREERNDDKAPARGERRRRVQSAVTGMAVLKGLARMGGRATLTGLAAHIDESPAKVHRYL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
VSLVEEGLVAQDAGGQQYQLGVEALHIGLAAMRQADPIRLAEASLIRVRERHEVTCFIAV
HHHHHCCCEECCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEE
MGNKGPTIVRFEEPGLPVTVNVRVGSVMPLLWSATGRVFLGLLDEREVLALARAELAAAA
ECCCCCEEEEEECCCCCEEEEEECCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC
PDLRAMLAADDPIGQLRRDVRTAGCAAVRDVNLKGISAVSAPVFDYTGRLSAVLTALGAT
CHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCC
GGFDPDIDGPIGRVVREEAAAVSAQLGYVPT
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MREERNDDKAPARGERRRRVQSAVTGMAVLKGLARMGGRATLTGLAAHIDESPAKVHRYL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
VSLVEEGLVAQDAGGQQYQLGVEALHIGLAAMRQADPIRLAEASLIRVRERHEVTCFIAV
HHHHHCCCEECCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEE
MGNKGPTIVRFEEPGLPVTVNVRVGSVMPLLWSATGRVFLGLLDEREVLALARAELAAAA
ECCCCCEEEEEECCCCCEEEEEECCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC
PDLRAMLAADDPIGQLRRDVRTAGCAAVRDVNLKGISAVSAPVFDYTGRLSAVLTALGAT
CHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCC
GGFDPDIDGPIGRVVREEAAAVSAQLGYVPT
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA