Click here to switch to the map view.

The map label for this gene is omp32 [H]

Identifier: 73539039

GI number: 73539039

Start: 1963027

End: 1964091

Strand: Reverse

Name: omp32 [H]

Synonym: Reut_B5216

Alternate gene names: 73539039

Gene position: 1964091-1963027 (Counterclockwise)

Preceding gene: 73539041

Following gene: 73539038

Centisome position: 72.05

GC content: 60.19

Gene sequence:

>1065_bases
GTGAAAAAAACTCTCCTCGCAATGGCAGTCACAACTTGCGCCTTGTCCGGCGCCGCCTTTGCTCAATCGTCCAACGTGAC
GCTCTATGGCATCGCTGATGCTGGCGTCAGTTTCCAAAGCCACGTCAATGGTGGCGCTAACGGAAGTGGCTCCGTAACCG
GTGTGACTTCGGGTGGCCTCTCCGGCTCGCGTTGGGGCCTGCGCGGTGTCGAGGATCTGGGCAACAATCTGAAGGGCATC
TTCGTACTGGAAAGCGGCTTTGACATCGATTCTGGCAAATCCGCCCAAGGGGGCCGACTGTTCGGGCGCCAGGCCTATGT
TGGCTTGCAAGGCAACTACGGCGCTATCACGTTAGGCCGCCAGCAGAACGCGCTCTATGACTTATTCGGCGCGTACGACC
CGATGGCGGTGGGACCGATGTACTCGCTCAACTCCGTCGATAACCAATTCAATGGCCGCGCCGACAATGCCATCAAGTAC
ACCGGCAAGTTCGGCGGCCTGACGGCAACCGGCTTCTACAGCTTCGGCCGCGATGTCACGTCCGGCCTCGGCGGTGAAGT
GCCGGGTCATTTCAAGGTGGGTACCAACTTTGGCGGCGGCCTGGCCTATGCGAGCGGCCCATTCTCGGTGGGCGCTGCTT
ATGATCAGTTCCAGGGAAGCACCCTTGCGTCGGCGGACCTGACCGCCAAGCGTGCTGCGATTGGCGCCTCGTATGCATTC
GGTAATGCCAAGGCATTTGCCGGATACCGCTGGATGCAGGACGAGGTCACGACCGGCAAGGCCCGCCACGACAACCTGTA
TTGGTTGGGGGCAAATTACAAGTTCACGCCGGCCTTCACCCTGACCGGCGCGACCTACTTTACCGACGCGCGCACTGACA
GCAAGGACTCGTGGATGTTCGTCCTGAATGCTGACTATGCCTTCTCCAAGCGTACGGATGCGTACCTGTTGCTTGGTTAT
GTGAAGAACAAGGGCAACGCCACGTTCGGTGTGACGGGCACCGCGAATACGCTGCCGGGCCAGAACCAGACTGGCGCTAT
GGTCGGCGTGCGTCACCGCTTCTGA

Upstream 100 bases:

>100_bases
CGCAATATCTCGCGGCCGAGTCGGTGGGAGGCTGCGGCTCGCAAGCTAGCCGTGACACCACCGCCAGGAACCTTCGCTTA
AAAGAAACCGGGATTTGACA

Downstream 100 bases:

>100_bases
TCCGCCTTGGTGCGGAATTGGCACACCATAGAGTGTGCCGTGACAGATCATATCGACCTTGACTTGTCACTGGGTTAAGG
ACATTTGGCCGGCATATGCC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKKTLLAMAVTTCALSGAAFAQSSNVTLYGIADAGVSFQSHVNGGANGSGSVTGVTSGGLSGSRWGLRGVEDLGNNLKGI
FVLESGFDIDSGKSAQGGRLFGRQAYVGLQGNYGAITLGRQQNALYDLFGAYDPMAVGPMYSLNSVDNQFNGRADNAIKY
TGKFGGLTATGFYSFGRDVTSGLGGEVPGHFKVGTNFGGGLAYASGPFSVGAAYDQFQGSTLASADLTAKRAAIGASYAF
GNAKAFAGYRWMQDEVTTGKARHDNLYWLGANYKFTPAFTLTGATYFTDARTDSKDSWMFVLNADYAFSKRTDAYLLLGY
VKNKGNATFGVTGTANTLPGQNQTGAMVGVRHRF

Sequences:

>Translated_354_residues
MKKTLLAMAVTTCALSGAAFAQSSNVTLYGIADAGVSFQSHVNGGANGSGSVTGVTSGGLSGSRWGLRGVEDLGNNLKGI
FVLESGFDIDSGKSAQGGRLFGRQAYVGLQGNYGAITLGRQQNALYDLFGAYDPMAVGPMYSLNSVDNQFNGRADNAIKY
TGKFGGLTATGFYSFGRDVTSGLGGEVPGHFKVGTNFGGGLAYASGPFSVGAAYDQFQGSTLASADLTAKRAAIGASYAF
GNAKAFAGYRWMQDEVTTGKARHDNLYWLGANYKFTPAFTLTGATYFTDARTDSKDSWMFVLNADYAFSKRTDAYLLLGY
VKNKGNATFGVTGTANTLPGQNQTGAMVGVRHRF
>Mature_354_residues
MKKTLLAMAVTTCALSGAAFAQSSNVTLYGIADAGVSFQSHVNGGANGSGSVTGVTSGGLSGSRWGLRGVEDLGNNLKGI
FVLESGFDIDSGKSAQGGRLFGRQAYVGLQGNYGAITLGRQQNALYDLFGAYDPMAVGPMYSLNSVDNQFNGRADNAIKY
TGKFGGLTATGFYSFGRDVTSGLGGEVPGHFKVGTNFGGGLAYASGPFSVGAAYDQFQGSTLASADLTAKRAAIGASYAF
GNAKAFAGYRWMQDEVTTGKARHDNLYWLGANYKFTPAFTLTGATYFTDARTDSKDSWMFVLNADYAFSKRTDAYLLLGY
VKNKGNATFGVTGTANTLPGQNQTGAMVGVRHRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37072; Mature: 37072

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLAMAVTTCALSGAAFAQSSNVTLYGIADAGVSFQSHVNGGANGSGSVTGVTSGGL
CCCHHHHHHHHHHHHCCHHEECCCCEEEEEECCCCCEEHHHCCCCCCCCCCEEEEECCCC
SGSRWGLRGVEDLGNNLKGIFVLESGFDIDSGKSAQGGRLFGRQAYVGLQGNYGAITLGR
CCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEEEEECCCCCEEEECC
QQNALYDLFGAYDPMAVGPMYSLNSVDNQFNGRADNAIKYTGKFGGLTATGFYSFGRDVT
CCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHCCHHH
SGLGGEVPGHFKVGTNFGGGLAYASGPFSVGAAYDQFQGSTLASADLTAKRAAIGASYAF
HCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCHHHCCCCEEECCCCHHHHHHCCCEEEC
GNAKAFAGYRWMQDEVTTGKARHDNLYWLGANYKFTPAFTLTGATYFTDARTDSKDSWMF
CCCEEEECEEEECCCCCCCCCCCCCEEEECCCEEECCEEEECCCEEEECCCCCCCCCEEE
VLNADYAFSKRTDAYLLLGYVKNKGNATFGVTGTANTLPGQNQTGAMVGVRHRF
EEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKKTLLAMAVTTCALSGAAFAQSSNVTLYGIADAGVSFQSHVNGGANGSGSVTGVTSGGL
CCCHHHHHHHHHHHHCCHHEECCCCEEEEEECCCCCEEHHHCCCCCCCCCCEEEEECCCC
SGSRWGLRGVEDLGNNLKGIFVLESGFDIDSGKSAQGGRLFGRQAYVGLQGNYGAITLGR
CCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEEEEECCCCCEEEECC
QQNALYDLFGAYDPMAVGPMYSLNSVDNQFNGRADNAIKYTGKFGGLTATGFYSFGRDVT
CCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHCCHHH
SGLGGEVPGHFKVGTNFGGGLAYASGPFSVGAAYDQFQGSTLASADLTAKRAAIGASYAF
HCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCHHHCCCCEEECCCCHHHHHHCCCEEEC
GNAKAFAGYRWMQDEVTTGKARHDNLYWLGANYKFTPAFTLTGATYFTDARTDSKDSWMF
CCCEEEECEEEECCCCCCCCCCCCCEEEECCCEEECCEEEECCCEEEECCCCCCCCCEEE
VLNADYAFSKRTDAYLLLGYVKNKGNATFGVTGTANTLPGQNQTGAMVGVRHRF
EEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]