| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is groL [H]
Identifier: 73539017
GI number: 73539017
Start: 1937765
End: 1939399
Strand: Direct
Name: groL [H]
Synonym: Reut_B5194
Alternate gene names: 73539017
Gene position: 1937765-1939399 (Clockwise)
Preceding gene: 73539014
Following gene: 73539018
Centisome position: 71.08
GC content: 65.32
Gene sequence:
>1635_bases ATGCCCGAAAAAACTCTTATCTTCCACCAGAGCGCGCGACGCGAGATGCTTCATGGTGTGGAATTGCTCGCGCGGGCCGT CAAGGTCACGCTGGGACCGGGCGGGCGCAATGTCATCGTAGAACGCCGCGACATGGTGCCCCTGGTCGCCAACTCCGGGG TGGTGGTAGCCAAGTCCGTCTCGCTGCCCGACCCGTTCGCCGATATGGGCGCCCGCCTGCTCTGCGAAGCAGCGGTCCGA ACCAGCGAGATCGCCGGCGACGGCACCACGACTGCGACGACCCTTGCCCACGCCATCGTGGCGGAAGGGGTGAAGTACGT CGAGGCCGGACACGACCCGATGCAACTCAAACGAGGCATCGAAGCGGCCGGAAAACTAGTCTCGGAGCATTTGCTGGCAA GTGCGAAGCCGTGCGGCGGTACTGACGAAATGAGGCAGATTGCGACCATCTCGGCCAGCGGCGACCACACTGTCGGAACG CTGGTCGCCCAGGCCGTGGAACACGTGGGCAAGGACGGCGCCATCAGCGTCGAAGACGGTTCCAAACTTGACGACGAGCT GGATATTGCCGAAGGCGCACTGATCGACCGCGGCTACCTGTCTCCGCTGTTCGCGACCACGGAGAGCCGCGCTGTCGTGC TCGAATCTCCGCTGGTACTGCTTTGTGACGCAAGTATCTCGTCGATAGCACAGTTGCTGCCGATCCTGGAAGCTGTGACG CGGGCAGGCCGGTCGTTGCTGGTCATTGCCAACGATGTGGAAGGCGAAGCGCTGGCGACGCTGGTCGTCAACAACCTGCG CGGCGCACTGAAGAGCTGCGCGGTAAAGTCCCCTGGCTTTGGCGACTCTCGCACCGAGCAACTTGGGGATCTCGCTGCGC TGACCGGCGCGACGGTGGTGTCGCCGCAAACGGGCACATCCCTTGAGCATGTCGGACTGGAACAACTGGGCGAGGCACGG CGCGTGGAAATCAACAAGGACGCGACGACGCTGGTGGGCTCCGGCGCCGATGCATCCCGCGTAGCCGCGCGCATCGCCGT ACTGCGCAGCCGGGTGCCCGACGCACGCTCGGACTACGACCGCGAAGGATTGCAGCGTCGCATCGCCCGGCTGACGGGCG GCGTCGCCGTCATCAAGGTCGGCGCGGCTACCGAGAGCGCATTGCATGAACGCAAGAACCGGTTCCAGGACGCATTGCAT GCTACGCGCGCCGCAGTGGACGAGGGCATCGTCGCAGGTGGAGGCGTGGCGCTGCTGCGTGCCCGTACCGTGCTGCAGGA CTGGCAAGCGCCAAATGCGGAACAGGCTGCCGGTGCACGCATCGTCCACGCAGCGCTGGCGGCGCCAATGCGGCAGATCG TCGCGAATGCCGGCGCCGACGCCGATGCGGTCGTTCACCGGGTATGCGAGGCGTCGGGAACCATCGGCTACGATGCCGGG GGCGAGCGCTTTGGCGACATGCTCGAACTCGGCGTGATCGACCCGGTCAAGGTCGTACGCACCGCGCTGCAGAATGCCGT CTCCATCGCTTCATTGCTGCTCACGACCGACTGCATGATTGCGATCGAGCGCATCCCCCACGGCTCCGCGGAGAACGCTG CCGCGGGAGCCCGCATGTTCGGCGAAGAATTCTGA
Upstream 100 bases:
>100_bases GCCATCGCGCATCGTCGCCCTTGCGTTACATCAACGCGCGCGTCGCCACGGCACCTACGGTAGAGCCGTTGCCAACCTGG ATCACGATGCGGAATTCGCC
Downstream 100 bases:
>100_bases CCAGCTTGCCCCGGATGCAGCAGGTAAGCGCGCTCTCGCATGCCCACCAGGCCAAAGGACCCCGGCTTGCGCGGACTCGC GGGGTCGAAACCTGCCGGTC
Product: chaperonin Cpn60/TCP-1
Products: NA
Alternate protein names: GroEL protein; Protein Cpn60 [H]
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MPEKTLIFHQSARREMLHGVELLARAVKVTLGPGGRNVIVERRDMVPLVANSGVVVAKSVSLPDPFADMGARLLCEAAVR TSEIAGDGTTTATTLAHAIVAEGVKYVEAGHDPMQLKRGIEAAGKLVSEHLLASAKPCGGTDEMRQIATISASGDHTVGT LVAQAVEHVGKDGAISVEDGSKLDDELDIAEGALIDRGYLSPLFATTESRAVVLESPLVLLCDASISSIAQLLPILEAVT RAGRSLLVIANDVEGEALATLVVNNLRGALKSCAVKSPGFGDSRTEQLGDLAALTGATVVSPQTGTSLEHVGLEQLGEAR RVEINKDATTLVGSGADASRVAARIAVLRSRVPDARSDYDREGLQRRIARLTGGVAVIKVGAATESALHERKNRFQDALH ATRAAVDEGIVAGGGVALLRARTVLQDWQAPNAEQAAGARIVHAALAAPMRQIVANAGADADAVVHRVCEASGTIGYDAG GERFGDMLELGVIDPVKVVRTALQNAVSIASLLLTTDCMIAIERIPHGSAENAAAGARMFGEEF
Sequences:
>Translated_544_residues MPEKTLIFHQSARREMLHGVELLARAVKVTLGPGGRNVIVERRDMVPLVANSGVVVAKSVSLPDPFADMGARLLCEAAVR TSEIAGDGTTTATTLAHAIVAEGVKYVEAGHDPMQLKRGIEAAGKLVSEHLLASAKPCGGTDEMRQIATISASGDHTVGT LVAQAVEHVGKDGAISVEDGSKLDDELDIAEGALIDRGYLSPLFATTESRAVVLESPLVLLCDASISSIAQLLPILEAVT RAGRSLLVIANDVEGEALATLVVNNLRGALKSCAVKSPGFGDSRTEQLGDLAALTGATVVSPQTGTSLEHVGLEQLGEAR RVEINKDATTLVGSGADASRVAARIAVLRSRVPDARSDYDREGLQRRIARLTGGVAVIKVGAATESALHERKNRFQDALH ATRAAVDEGIVAGGGVALLRARTVLQDWQAPNAEQAAGARIVHAALAAPMRQIVANAGADADAVVHRVCEASGTIGYDAG GERFGDMLELGVIDPVKVVRTALQNAVSIASLLLTTDCMIAIERIPHGSAENAAAGARMFGEEF >Mature_543_residues PEKTLIFHQSARREMLHGVELLARAVKVTLGPGGRNVIVERRDMVPLVANSGVVVAKSVSLPDPFADMGARLLCEAAVRT SEIAGDGTTTATTLAHAIVAEGVKYVEAGHDPMQLKRGIEAAGKLVSEHLLASAKPCGGTDEMRQIATISASGDHTVGTL VAQAVEHVGKDGAISVEDGSKLDDELDIAEGALIDRGYLSPLFATTESRAVVLESPLVLLCDASISSIAQLLPILEAVTR AGRSLLVIANDVEGEALATLVVNNLRGALKSCAVKSPGFGDSRTEQLGDLAALTGATVVSPQTGTSLEHVGLEQLGEARR VEINKDATTLVGSGADASRVAARIAVLRSRVPDARSDYDREGLQRRIARLTGGVAVIKVGAATESALHERKNRFQDALHA TRAAVDEGIVAGGGVALLRARTVLQDWQAPNAEQAAGARIVHAALAAPMRQIVANAGADADAVVHRVCEASGTIGYDAGG ERFGDMLELGVIDPVKVVRTALQNAVSIASLLLTTDCMIAIERIPHGSAENAAAGARMFGEEF
Specific function: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions [H]
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaperonin (HSP60) family [H]
Homologues:
Organism=Homo sapiens, GI41399285, Length=526, Percent_Identity=42.5855513307985, Blast_Score=404, Evalue=1e-112, Organism=Homo sapiens, GI31542947, Length=526, Percent_Identity=42.5855513307985, Blast_Score=404, Evalue=1e-112, Organism=Escherichia coli, GI1790586, Length=521, Percent_Identity=52.0153550863724, Blast_Score=537, Evalue=1e-154, Organism=Caenorhabditis elegans, GI17555558, Length=530, Percent_Identity=44.3396226415094, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI193210679, Length=213, Percent_Identity=46.0093896713615, Blast_Score=183, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6323288, Length=522, Percent_Identity=45.2107279693487, Blast_Score=438, Evalue=1e-124, Organism=Drosophila melanogaster, GI45550936, Length=519, Percent_Identity=43.5452793834297, Blast_Score=420, Evalue=1e-117, Organism=Drosophila melanogaster, GI45550132, Length=519, Percent_Identity=43.5452793834297, Blast_Score=420, Evalue=1e-117, Organism=Drosophila melanogaster, GI45550935, Length=519, Percent_Identity=43.5452793834297, Blast_Score=420, Evalue=1e-117, Organism=Drosophila melanogaster, GI24641193, Length=526, Percent_Identity=43.1558935361217, Blast_Score=416, Evalue=1e-116, Organism=Drosophila melanogaster, GI24641191, Length=526, Percent_Identity=43.1558935361217, Blast_Score=416, Evalue=1e-116, Organism=Drosophila melanogaster, GI17864606, Length=527, Percent_Identity=40.607210626186, Blast_Score=377, Evalue=1e-105, Organism=Drosophila melanogaster, GI24584129, Length=516, Percent_Identity=37.2093023255814, Blast_Score=298, Evalue=5e-81, Organism=Drosophila melanogaster, GI19921262, Length=516, Percent_Identity=37.2093023255814, Blast_Score=298, Evalue=5e-81,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018370 - InterPro: IPR001844 - InterPro: IPR002423 [H]
Pfam domain/function: PF00118 Cpn60_TCP1 [H]
EC number: NA
Molecular weight: Translated: 56596; Mature: 56465
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEKTLIFHQSARREMLHGVELLARAVKVTLGPGGRNVIVERRDMVPLVANSGVVVAKSV CCCCEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEEEECCCEEEEECC SLPDPFADMGARLLCEAAVRTSEIAGDGTTTATTLAHAIVAEGVKYVEAGHDPMQLKRGI CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHH EAAGKLVSEHLLASAKPCGGTDEMRQIATISASGDHTVGTLVAQAVEHVGKDGAISVEDG HHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCEEEECCC SKLDDELDIAEGALIDRGYLSPLFATTESRAVVLESPLVLLCDASISSIAQLLPILEAVT CCCCCHHHHHCCCEECCCCCCHHHHCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHH RAGRSLLVIANDVEGEALATLVVNNLRGALKSCAVKSPGFGDSRTEQLGDLAALTGATVV HCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEE SPQTGTSLEHVGLEQLGEARRVEINKDATTLVGSGADASRVAARIAVLRSRVPDARSDYD CCCCCCCHHHCCHHHHCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC REGLQRRIARLTGGVAVIKVGAATESALHERKNRFQDALHATRAAVDEGIVAGGGVALLR HHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH ARTVLQDWQAPNAEQAAGARIVHAALAAPMRQIVANAGADADAVVHRVCEASGTIGYDAG HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC GERFGDMLELGVIDPVKVVRTALQNAVSIASLLLTTDCMIAIERIPHGSAENAAAGARMF CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH GEEF CCCC >Mature Secondary Structure PEKTLIFHQSARREMLHGVELLARAVKVTLGPGGRNVIVERRDMVPLVANSGVVVAKSV CCCEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEEEECCCEEEEECC SLPDPFADMGARLLCEAAVRTSEIAGDGTTTATTLAHAIVAEGVKYVEAGHDPMQLKRGI CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHH EAAGKLVSEHLLASAKPCGGTDEMRQIATISASGDHTVGTLVAQAVEHVGKDGAISVEDG HHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCEEEECCC SKLDDELDIAEGALIDRGYLSPLFATTESRAVVLESPLVLLCDASISSIAQLLPILEAVT CCCCCHHHHHCCCEECCCCCCHHHHCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHH RAGRSLLVIANDVEGEALATLVVNNLRGALKSCAVKSPGFGDSRTEQLGDLAALTGATVV HCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEE SPQTGTSLEHVGLEQLGEARRVEINKDATTLVGSGADASRVAARIAVLRSRVPDARSDYD CCCCCCCHHHCCHHHHCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC REGLQRRIARLTGGVAVIKVGAATESALHERKNRFQDALHATRAAVDEGIVAGGGVALLR HHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH ARTVLQDWQAPNAEQAAGARIVHAALAAPMRQIVANAGADADAVVHRVCEASGTIGYDAG HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC GERFGDMLELGVIDPVKVVRTALQNAVSIASLLLTTDCMIAIERIPHGSAENAAAGARMF CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH GEEF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA