Click here to switch to the map view.

The map label for this gene is rssB [H]

Identifier: 73538992

GI number: 73538992

Start: 1908274

End: 1908933

Strand: Direct

Name: rssB [H]

Synonym: Reut_B5168

Alternate gene names: 73538992

Gene position: 1908274-1908933 (Clockwise)

Preceding gene: 73538986

Following gene: 73538993

Centisome position: 70.0

GC content: 60.76

Gene sequence:

>660_bases
ATGAGAGTCCTTCTCATCGAAGATGAACCTTGGCTCGGGGAGGCTGTCCGCGACCAGATCGAGAAAGACGGACATCCGAC
CGACTTCGTGGCCAGCATCGCCGATGCGCGCCGACACCTTGCGGCCGCTAACTACGACCTGATCCTGCTCGATCTGCTGC
TTCCCGACGGTAGGGGGCTCGATTTCCTGCGAGAGATTCGCTCGGGTGGTTCGACCGTGCCGGTCATCATCTTGACTGCG
CTCGATCAGGTATCAAACCGCATCGCTGGCCTGAACGCCGGCGCGGATGACTATCTCGTTAAGCCGTTCGACCTGTCGGA
GCTCTCCGCACGGGTGAGCGCGGTGTCACGCCGGTATTCGGGCAATCCCAATCCCCTGGTCACACTCGGCGAACTGCATA
TCGATACGGCGGGGCGCAGCGTGATGCGCGGGGACGCGCACGTTGACCTGACGGCCAGTGAATGGGCACTTCTCGAAGCC
CTGATTCAGCGTCCGGGGATGATCGTGTCAAGGAGCCGGCTGGAGGATCGCCTTTATTCCTTCAACGAGGAGATTGGCAG
CAACACCATCGAGGTACACATGAGCCGGCTACGCAAGAAGCTTGGTGCCGATGTCATCGAGACATTGCGTGGGCTCGGCT
ATCGGCTCAAGCGGGACTGA

Upstream 100 bases:

>100_bases
TGAAACCTGAAGCCAAGCTTGCGGACACAAGAAATTTTCTTCATGTTGGTGACAGGTTCGCGTGCCAAAGTCACGCGACA
CACCTATCAAGGAGCTCTTA

Downstream 100 bases:

>100_bases
CCATGCTGCGCAGCCTGCAAGGTCGACTCGCGGCAGCGCTGGTTGCAGGGCTCGCCGTGCTGTCGCTGGCCGCGACGGCG
GCTTCTTTCTACGTACTGCG

Product: response regulator receiver:transcriptional regulatory protein, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRVLLIEDEPWLGEAVRDQIEKDGHPTDFVASIADARRHLAAANYDLILLDLLLPDGRGLDFLREIRSGGSTVPVIILTA
LDQVSNRIAGLNAGADDYLVKPFDLSELSARVSAVSRRYSGNPNPLVTLGELHIDTAGRSVMRGDAHVDLTASEWALLEA
LIQRPGMIVSRSRLEDRLYSFNEEIGSNTIEVHMSRLRKKLGADVIETLRGLGYRLKRD

Sequences:

>Translated_219_residues
MRVLLIEDEPWLGEAVRDQIEKDGHPTDFVASIADARRHLAAANYDLILLDLLLPDGRGLDFLREIRSGGSTVPVIILTA
LDQVSNRIAGLNAGADDYLVKPFDLSELSARVSAVSRRYSGNPNPLVTLGELHIDTAGRSVMRGDAHVDLTASEWALLEA
LIQRPGMIVSRSRLEDRLYSFNEEIGSNTIEVHMSRLRKKLGADVIETLRGLGYRLKRD
>Mature_219_residues
MRVLLIEDEPWLGEAVRDQIEKDGHPTDFVASIADARRHLAAANYDLILLDLLLPDGRGLDFLREIRSGGSTVPVIILTA
LDQVSNRIAGLNAGADDYLVKPFDLSELSARVSAVSRRYSGNPNPLVTLGELHIDTAGRSVMRGDAHVDLTASEWALLEA
LIQRPGMIVSRSRLEDRLYSFNEEIGSNTIEVHMSRLRKKLGADVIETLRGLGYRLKRD

Specific function: Member of the two-component regulatory system rssA/rssB involved in regulation of swarming motility which has been shown to be inhibited by saturated fatty acids. RssA/rssB regulates cellular fatty acid composition, hemolysin production and cell surface t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=41.2037037037037, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=41.2037037037037, Blast_Score=161, Evalue=3e-41,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=38.0733944954128, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=37.1681415929204, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=37.6681614349776, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=37.5565610859729, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=34.6846846846847, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=33.6244541484716, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=32.9004329004329, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=30.0884955752212, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=32.7433628318584, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1790863, Length=237, Percent_Identity=28.2700421940928, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=26.6375545851528, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=32.4074074074074, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24252; Mature: 24252

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLIEDEPWLGEAVRDQIEKDGHPTDFVASIADARRHLAAANYDLILLDLLLPDGRGL
CEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH
DFLREIRSGGSTVPVIILTALDQVSNRIAGLNAGADDYLVKPFDLSELSARVSAVSRRYS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GNPNPLVTLGELHIDTAGRSVMRGDAHVDLTASEWALLEALIQRPGMIVSRSRLEDRLYS
CCCCCEEEEEEEEECCCCCHHHCCCCEEEECHHHHHHHHHHHHCCCCEEHHHHHHHHHHH
FNEEIGSNTIEVHMSRLRKKLGADVIETLRGLGYRLKRD
HHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHCCCEECCC
>Mature Secondary Structure
MRVLLIEDEPWLGEAVRDQIEKDGHPTDFVASIADARRHLAAANYDLILLDLLLPDGRGL
CEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH
DFLREIRSGGSTVPVIILTALDQVSNRIAGLNAGADDYLVKPFDLSELSARVSAVSRRYS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GNPNPLVTLGELHIDTAGRSVMRGDAHVDLTASEWALLEALIQRPGMIVSRSRLEDRLYS
CCCCCEEEEEEEEECCCCCHHHCCCCEEEECHHHHHHHHHHHHCCCCEEHHHHHHHHHHH
FNEEIGSNTIEVHMSRLRKKLGADVIETLRGLGYRLKRD
HHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA