| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is sgaA [H]
Identifier: 73538965
GI number: 73538965
Start: 1879632
End: 1880852
Strand: Direct
Name: sgaA [H]
Synonym: Reut_B5140
Alternate gene names: 73538965
Gene position: 1879632-1880852 (Clockwise)
Preceding gene: 73538963
Following gene: 73538966
Centisome position: 68.95
GC content: 65.36
Gene sequence:
>1221_bases ATGCTGAAACTGGACTTCCATCCCGCTGGCCGTCATTTCCTGCAAATCCCCGGACCAAGCCCGGTGCCGGATCGCATCCT GCGGGCCATCAGCTACCCGACCATTGACCATCGCGGCCCGGAGTTCGGCGCGCTGGGATTGAAGGTGCTGGCCGGCATCC GCAAGATCTTCAAGACTGAGCAGCCGGTTGTGATCTATCCGGCCTCCGGAACAGGCGCATGGGAAGCCGCGCTATCCAAC ACGCTGAGCCCGGGCGATACCGTGCTGATGTTCGAGACCGGCCACTTCGCCACGCTCTGGAAAAAGATGGCCGAGAAACT TGGGCTGCGCCCGGAGTTCCTGGGCTTGCCGGGCATCGAGGGCTGGCGCCGCGGGGTTCAGGCCGACATGATCGAAGCGC GCCTGCGCCAGGACAGCGACCATGCCATCAAGGCGGTCTGCGTGGTGCATAACGAGACCTCGACCGGCGTCACGTCTGAT ATCGCCGCCGTGCGCAAGGCCATCGATGCAGCGGGCCATCCGGCGCTGCTGATGGTCGACACAATCTCGGGGCTGGCCTC TGCCGACTATCGCCACGACGAGTGGGGCGTGGACGTGACCGTCTCCGGCTCGCAAAAGGGGCTCATGCTGCCGCCGGGCA TCAGCTTCAACGCCGTGTCGCCGAAGGCAATCGAAGCCAGCCGGTCCGCGCGCCTGCCACGCAGTTTCTGGGATTGGGAG GAGATCATCGCCATGAACCGGACCGGCTACTGGCCCTACACGCCCAGCACGAACCTGCTCTATGGCTTGTCGGAGGCGCT GGACATGATCCTTGAAGAAGGGCTCGACAACGTCTTCGCACGCCACCATCGCCTGGCCGAGGCTTGCCGCCGTGCAGTGC GCGCATGGGGCCTCGAGATCCAGTGCGCGGACCCGTCGGTCTACAGCCCGGTGCTGACCGGCGTGATGATGCACGACGGC ATTGACGCGGACTCCGTGCGCCGGATCATCTACGACCGCTTCAACATGTCGCTCGGCGCGGCGCTCGGCAAGATGAAGGG GCGGATGTTCCGTATCGGCCATCTCGGCGACTGCAACGATCTCACGCTGATGGCCACGCTGTCCGGCTGCGAAATGGGGC TGAAGTTGTCCGGTGTGCCAGTGGCCGCAAGCGGCGTCGCCGCAGCCATGGACTATCTCGCGGCCCACGCAAACCCCTTG CCGCTGCGGGCCGCAGCCTGA
Upstream 100 bases:
>100_bases GATCGGGGTAAACACTGCGTTTTTTTCTTGTTCCGGGCCCTTCTCCGATGCGCCTCTCCTGCTAAAGTATTTTGAATGCA AAATTCAACAGGAGGAGCAA
Downstream 100 bases:
>100_bases CGCAGGCCACCGGGTCCTGCGATCGCGGCGAGCCCCAGTTCACAGTCAAGGCCGGGGAGGGCCTTGCCGCAACTGGTTGG CAGCACCGCTGCAAGCGCGC
Product: class V aminotransferase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MLKLDFHPAGRHFLQIPGPSPVPDRILRAISYPTIDHRGPEFGALGLKVLAGIRKIFKTEQPVVIYPASGTGAWEAALSN TLSPGDTVLMFETGHFATLWKKMAEKLGLRPEFLGLPGIEGWRRGVQADMIEARLRQDSDHAIKAVCVVHNETSTGVTSD IAAVRKAIDAAGHPALLMVDTISGLASADYRHDEWGVDVTVSGSQKGLMLPPGISFNAVSPKAIEASRSARLPRSFWDWE EIIAMNRTGYWPYTPSTNLLYGLSEALDMILEEGLDNVFARHHRLAEACRRAVRAWGLEIQCADPSVYSPVLTGVMMHDG IDADSVRRIIYDRFNMSLGAALGKMKGRMFRIGHLGDCNDLTLMATLSGCEMGLKLSGVPVAASGVAAAMDYLAAHANPL PLRAAA
Sequences:
>Translated_406_residues MLKLDFHPAGRHFLQIPGPSPVPDRILRAISYPTIDHRGPEFGALGLKVLAGIRKIFKTEQPVVIYPASGTGAWEAALSN TLSPGDTVLMFETGHFATLWKKMAEKLGLRPEFLGLPGIEGWRRGVQADMIEARLRQDSDHAIKAVCVVHNETSTGVTSD IAAVRKAIDAAGHPALLMVDTISGLASADYRHDEWGVDVTVSGSQKGLMLPPGISFNAVSPKAIEASRSARLPRSFWDWE EIIAMNRTGYWPYTPSTNLLYGLSEALDMILEEGLDNVFARHHRLAEACRRAVRAWGLEIQCADPSVYSPVLTGVMMHDG IDADSVRRIIYDRFNMSLGAALGKMKGRMFRIGHLGDCNDLTLMATLSGCEMGLKLSGVPVAASGVAAAMDYLAAHANPL PLRAAA >Mature_406_residues MLKLDFHPAGRHFLQIPGPSPVPDRILRAISYPTIDHRGPEFGALGLKVLAGIRKIFKTEQPVVIYPASGTGAWEAALSN TLSPGDTVLMFETGHFATLWKKMAEKLGLRPEFLGLPGIEGWRRGVQADMIEARLRQDSDHAIKAVCVVHNETSTGVTSD IAAVRKAIDAAGHPALLMVDTISGLASADYRHDEWGVDVTVSGSQKGLMLPPGISFNAVSPKAIEASRSARLPRSFWDWE EIIAMNRTGYWPYTPSTNLLYGLSEALDMILEEGLDNVFARHHRLAEACRRAVRAWGLEIQCADPSVYSPVLTGVMMHDG IDADSVRRIIYDRFNMSLGAALGKMKGRMFRIGHLGDCNDLTLMATLSGCEMGLKLSGVPVAASGVAAAMDYLAAHANPL PLRAAA
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=350, Percent_Identity=29.4285714285714, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17536281, Length=354, Percent_Identity=28.5310734463277, Blast_Score=125, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6321079, Length=374, Percent_Identity=28.6096256684492, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI17530823, Length=387, Percent_Identity=25.8397932816537, Blast_Score=121, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 44005; Mature: 44005
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLDFHPAGRHFLQIPGPSPVPDRILRAISYPTIDHRGPEFGALGLKVLAGIRKIFKTE CEEECCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC QPVVIYPASGTGAWEAALSNTLSPGDTVLMFETGHFATLWKKMAEKLGLRPEFLGLPGIE CCEEEEECCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHCCCCCCH GWRRGVQADMIEARLRQDSDHAIKAVCVVHNETSTGVTSDIAAVRKAIDAAGHPALLMVD HHHHCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEE TISGLASADYRHDEWGVDVTVSGSQKGLMLPPGISFNAVSPKAIEASRSARLPRSFWDWE CHHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCHHHCCHH EIIAMNRTGYWPYTPSTNLLYGLSEALDMILEEGLDNVFARHHRLAEACRRAVRAWGLEI HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE QCADPSVYSPVLTGVMMHDGIDADSVRRIIYDRFNMSLGAALGKMKGRMFRIGHLGDCND EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCEEEECCCCCCCC LTLMATLSGCEMGLKLSGVPVAASGVAAAMDYLAAHANPLPLRAAA EEEEEEECCCCCCCEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLKLDFHPAGRHFLQIPGPSPVPDRILRAISYPTIDHRGPEFGALGLKVLAGIRKIFKTE CEEECCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC QPVVIYPASGTGAWEAALSNTLSPGDTVLMFETGHFATLWKKMAEKLGLRPEFLGLPGIE CCEEEEECCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHCCCCCCH GWRRGVQADMIEARLRQDSDHAIKAVCVVHNETSTGVTSDIAAVRKAIDAAGHPALLMVD HHHHCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEE TISGLASADYRHDEWGVDVTVSGSQKGLMLPPGISFNAVSPKAIEASRSARLPRSFWDWE CHHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCHHHCCHH EIIAMNRTGYWPYTPSTNLLYGLSEALDMILEEGLDNVFARHHRLAEACRRAVRAWGLEI HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE QCADPSVYSPVLTGVMMHDGIDADSVRRIIYDRFNMSLGAALGKMKGRMFRIGHLGDCND EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCEEEECCCCCCCC LTLMATLSGCEMGLKLSGVPVAASGVAAAMDYLAAHANPLPLRAAA EEEEEEECCCCCCCEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8144463 [H]