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The map label for this gene is fliF [H]

Identifier: 73538922

GI number: 73538922

Start: 1838263

End: 1839969

Strand: Direct

Name: fliF [H]

Synonym: Reut_B5097

Alternate gene names: 73538922

Gene position: 1838263-1839969 (Clockwise)

Preceding gene: 73538920

Following gene: 73538923

Centisome position: 67.43

GC content: 67.08

Gene sequence:

>1707_bases
ATGACCGCGGCAATGTCCTTGCCCGGCCGCTCGGGCGAAGTGCTCGACCGCCTCAAGGCCAATCCCAAGCTGCCGCTGAT
GCTCGGTGGCGCCGCACTGGCTGCGGCCATCGCCGTCGGCGTGCTGTGGTCGCGTGCGCCGGACTACAAGGTGCTGTACA
GCAACCTGTCCGAGCGCGACGGCGGCGCGGTGCTGCAGTCGCTGCAGCAGATGAACGTGCCGTACAAGTTCGCCGAAGGC
GGCGGCGCCGTGATGGTCCCGGCGGAAAAGGTCCATGAGACGCGTCTGCGCCTGGCTTCGCAAGGCCTGCCCAAGAGCGG
CACTACGGGCCTGGAACTGATGGACAACCAGAAGTTCGGCATCAGCCAGTTCGCCGAACAGGTCAATTACCAGCGCGGGC
TCGAAGGCGAGCTCGCGCGCTCGATCGAATCGATCGCCGCCGTGCAGTCCGCACGCGTGCACCTGGCCATTCCGAAGCCG
ACGCTGTTCGTGCGGGAGCGCCAGAAGCCCACGGCGTCCATCGTGCTGCAGCTTTATCCCGGCCGCGCGATCGATGAAGG
CCAGGTCGCGGCGATCAGCCACCTGGTGTCGTCGAGCGTGCCGGAACTGACGCCGAAGGCGATCTCCATCGTCGACCAGC
ACGGCAACCTGCTGTCGAACAGCGGCAACGAGCGCATGCTCGACGCGACCCAGCTCAAGTATGTGCAGGCGCTGGAGCAG
AACTACCTGAAGCGCATCGAATCGATCCTGACGCCGATCGTCGGCAAGGACAATGTGCGCGCACAGGTGACGGCCGACGT
CGATTTCTCGATCGTCGAGCACACCGACGAAAGCTACAAGCCAAACCAGGACCCGACCCACGCTGCCATCCGCAGCCAGC
AGACCAGCGAGTCGAACCAGCAGGGTGCGACGCCGCCGGGCGGCGTGCCGGGCGCGCTGTCCAACCAGCCGCCGGCGCCT
GCCACGGCGCCGATCACCACGGCGCAAACGCCGCGTGCCGGACAGGCACCGGGCCAGGCCGGCGCACCCGCGCAGCCGCA
AGGCGCGCAGGCAGGCCAGGCCCAGGCCGCCACGAGCACCGCATCGACCGGCCCGAGCAGCAACCGTCGCGATTCGACGG
TCAACTACGAACTCGACCGCACCGTTCGCCACGTGCAGCAGGCGCCCGGTGGCGTGCGCCGCCTGTCCGTCGCGGTGGTG
GTCAATTACCGGCAACAGGCCGACGCCAAGGGCAAGATGGTCGCCCAGCCGCTGCCGCCGGCACTGCTGGCCCAGATCGA
GAACCTGACCAAGGAAACCATGGGCTTCTCGGCCGACCGCGGCGACTCGATCAATGTGGTGAACAGCCCGTTCACGGTCG
ATCGCGAAGTGACGCCTGAACTGCCGTTGTGGAAACAACCTGAAATGATCGACCTGGCCAAGACCGGCGCGGGCTATCTG
CTGCTGGCGCTGCTGGCACTGTTCGCGTGGTTCAAGATTGCGCGCCCGATCCTGCGCCGCTACACCACCCCGCCGCTGCC
GGCACCCACTCCGGCCGCCGAAACTACGGCCGAACTGCTGCCACCCGAGGAACCGACCAATCCGGAAGTCCTGCGGCTGG
CCGCGAAATATGAAAGCGATCTCGCGCTGGTGCGCGACGCCGCGCAACGCGACCCGCGCCTGGTTGCGAGCGTAATCAAG
AACTGGATTGGCAATGACCTCCGCTAA

Upstream 100 bases:

>100_bases
CTGAAGTGAGCCGTGCCGAAGCAAGGCGTGCCGACGTCCATGGTGGCCACCATCGCCAGAGCGATCGGGGCTATCGCCCG
GCCATGGCCGGAGCGCGCGC

Downstream 100 bases:

>100_bases
AGCCGCCTCCACTGCTACCGGCCTGCAGAAGAGCGCCATCCTGATGATGGCGATCGGCGAAGACGCCGCTGCCGAAGTGT
TCAAGCACCTGTCCCAGCGC

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MTAAMSLPGRSGEVLDRLKANPKLPLMLGGAALAAAIAVGVLWSRAPDYKVLYSNLSERDGGAVLQSLQQMNVPYKFAEG
GGAVMVPAEKVHETRLRLASQGLPKSGTTGLELMDNQKFGISQFAEQVNYQRGLEGELARSIESIAAVQSARVHLAIPKP
TLFVRERQKPTASIVLQLYPGRAIDEGQVAAISHLVSSSVPELTPKAISIVDQHGNLLSNSGNERMLDATQLKYVQALEQ
NYLKRIESILTPIVGKDNVRAQVTADVDFSIVEHTDESYKPNQDPTHAAIRSQQTSESNQQGATPPGGVPGALSNQPPAP
ATAPITTAQTPRAGQAPGQAGAPAQPQGAQAGQAQAATSTASTGPSSNRRDSTVNYELDRTVRHVQQAPGGVRRLSVAVV
VNYRQQADAKGKMVAQPLPPALLAQIENLTKETMGFSADRGDSINVVNSPFTVDREVTPELPLWKQPEMIDLAKTGAGYL
LLALLALFAWFKIARPILRRYTTPPLPAPTPAAETTAELLPPEEPTNPEVLRLAAKYESDLALVRDAAQRDPRLVASVIK
NWIGNDLR

Sequences:

>Translated_568_residues
MTAAMSLPGRSGEVLDRLKANPKLPLMLGGAALAAAIAVGVLWSRAPDYKVLYSNLSERDGGAVLQSLQQMNVPYKFAEG
GGAVMVPAEKVHETRLRLASQGLPKSGTTGLELMDNQKFGISQFAEQVNYQRGLEGELARSIESIAAVQSARVHLAIPKP
TLFVRERQKPTASIVLQLYPGRAIDEGQVAAISHLVSSSVPELTPKAISIVDQHGNLLSNSGNERMLDATQLKYVQALEQ
NYLKRIESILTPIVGKDNVRAQVTADVDFSIVEHTDESYKPNQDPTHAAIRSQQTSESNQQGATPPGGVPGALSNQPPAP
ATAPITTAQTPRAGQAPGQAGAPAQPQGAQAGQAQAATSTASTGPSSNRRDSTVNYELDRTVRHVQQAPGGVRRLSVAVV
VNYRQQADAKGKMVAQPLPPALLAQIENLTKETMGFSADRGDSINVVNSPFTVDREVTPELPLWKQPEMIDLAKTGAGYL
LLALLALFAWFKIARPILRRYTTPPLPAPTPAAETTAELLPPEEPTNPEVLRLAAKYESDLALVRDAAQRDPRLVASVIK
NWIGNDLR
>Mature_567_residues
TAAMSLPGRSGEVLDRLKANPKLPLMLGGAALAAAIAVGVLWSRAPDYKVLYSNLSERDGGAVLQSLQQMNVPYKFAEGG
GAVMVPAEKVHETRLRLASQGLPKSGTTGLELMDNQKFGISQFAEQVNYQRGLEGELARSIESIAAVQSARVHLAIPKPT
LFVRERQKPTASIVLQLYPGRAIDEGQVAAISHLVSSSVPELTPKAISIVDQHGNLLSNSGNERMLDATQLKYVQALEQN
YLKRIESILTPIVGKDNVRAQVTADVDFSIVEHTDESYKPNQDPTHAAIRSQQTSESNQQGATPPGGVPGALSNQPPAPA
TAPITTAQTPRAGQAPGQAGAPAQPQGAQAGQAQAATSTASTGPSSNRRDSTVNYELDRTVRHVQQAPGGVRRLSVAVVV
NYRQQADAKGKMVAQPLPPALLAQIENLTKETMGFSADRGDSINVVNSPFTVDREVTPELPLWKQPEMIDLAKTGAGYLL
LALLALFAWFKIARPILRRYTTPPLPAPTPAAETTAELLPPEEPTNPEVLRLAAKYESDLALVRDAAQRDPRLVASVIKN
WIGNDLR

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=567, Percent_Identity=49.3827160493827, Blast_Score=510, Evalue=1e-145,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 60823; Mature: 60692

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAMSLPGRSGEVLDRLKANPKLPLMLGGAALAAAIAVGVLWSRAPDYKVLYSNLSERD
CCCCCCCCCCCHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
GGAVLQSLQQMNVPYKFAEGGGAVMVPAEKVHETRLRLASQGLPKSGTTGLELMDNQKFG
HHHHHHHHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC
ISQFAEQVNYQRGLEGELARSIESIAAVQSARVHLAIPKPTLFVRERQKPTASIVLQLYP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEECCCCEEEEECCCCCCEEEEEEECC
GRAIDEGQVAAISHLVSSSVPELTPKAISIVDQHGNLLSNSGNERMLDATQLKYVQALEQ
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHH
NYLKRIESILTPIVGKDNVRAQVTADVDFSIVEHTDESYKPNQDPTHAAIRSQQTSESNQ
HHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
QGATPPGGVPGALSNQPPAPATAPITTAQTPRAGQAPGQAGAPAQPQGAQAGQAQAATST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
ASTGPSSNRRDSTVNYELDRTVRHVQQAPGGVRRLSVAVVVNYRQQADAKGKMVAQPLPP
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHEEEEEEEEECHHHCCCCCCEECCCCCH
ALLAQIENLTKETMGFSADRGDSINVVNSPFTVDREVTPELPLWKQPEMIDLAKTGAGYL
HHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCHHHHHHCCHHHH
LLALLALFAWFKIARPILRRYTTPPLPAPTPAAETTAELLPPEEPTNPEVLRLAAKYESD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LALVRDAAQRDPRLVASVIKNWIGNDLR
HHHHHHHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TAAMSLPGRSGEVLDRLKANPKLPLMLGGAALAAAIAVGVLWSRAPDYKVLYSNLSERD
CCCCCCCCCCHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
GGAVLQSLQQMNVPYKFAEGGGAVMVPAEKVHETRLRLASQGLPKSGTTGLELMDNQKFG
HHHHHHHHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC
ISQFAEQVNYQRGLEGELARSIESIAAVQSARVHLAIPKPTLFVRERQKPTASIVLQLYP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEECCCCEEEEECCCCCCEEEEEEECC
GRAIDEGQVAAISHLVSSSVPELTPKAISIVDQHGNLLSNSGNERMLDATQLKYVQALEQ
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHH
NYLKRIESILTPIVGKDNVRAQVTADVDFSIVEHTDESYKPNQDPTHAAIRSQQTSESNQ
HHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
QGATPPGGVPGALSNQPPAPATAPITTAQTPRAGQAPGQAGAPAQPQGAQAGQAQAATST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
ASTGPSSNRRDSTVNYELDRTVRHVQQAPGGVRRLSVAVVVNYRQQADAKGKMVAQPLPP
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHEEEEEEEEECHHHCCCCCCEECCCCCH
ALLAQIENLTKETMGFSADRGDSINVVNSPFTVDREVTPELPLWKQPEMIDLAKTGAGYL
HHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCHHHHHHCCHHHH
LLALLALFAWFKIARPILRRYTTPPLPAPTPAAETTAELLPPEEPTNPEVLRLAAKYESD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LALVRDAAQRDPRLVASVIKNWIGNDLR
HHHHHHHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]