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The map label for this gene is yhbU [H]

Identifier: 73538885

GI number: 73538885

Start: 1799240

End: 1800268

Strand: Reverse

Name: yhbU [H]

Synonym: Reut_B5060

Alternate gene names: 73538885

Gene position: 1800268-1799240 (Counterclockwise)

Preceding gene: 73538887

Following gene: 73538884

Centisome position: 66.04

GC content: 68.42

Gene sequence:

>1029_bases
ATGACAATTTCCTCTTCCGTGCGGGCGCGCCACCCGCAACTGGTGGCGCCGGCGGGCTCGCTGACCGCGCTGCGCGCGGC
GCTCGAACACGGCGCCGATGCCGTGTACCTCGGCTTGCGAGATGCCACTAACGCGCGCAACTTCGGCGGCCTCAACTTCA
CCGAGGCCGACATCCGCACCGGCGTGGCCGAAGCCCATGCACGCGATGCCGAGGTGCTGTTCGCGATCAACACGTTCCCG
CAGACGGGCGAAGTGGCGAAGTGGCAACGCGCGGTCGATGCTGCCGCGGATCTGGGCGCCGACGCGGTCATCATGGCCGA
TGCGGGACTCATGGCCTATGCGTCCGAGCGTCACCCCCAATTGCGGCTGCACCTGTCGGTGCAGGGCTCGGCCACGCATG
CCGACGCGATCGAACTGATGCGCGAGCGCTTCAACGTCAAGCGCGTGGTGCTGCCGCGCGTGCTGTCGCTCGCGCAGATC
GGCAAGCTCGCGCGGCAGACCAGCGTGGAACTCGAAGTCTTCGGTTTCGGCAGCCTGTGCGTGATGGCCGAGGGCCGCTG
CCTGCTGTCCTCATATGCGACCGGTGACTCGCCCAACAACAAGGGCGTGTGCTCGCCCGCGCATGCGGTGCGCTGGACCG
AGCAGGACGGCACCATGCATGCGCGCCTGTCGGGCATCCTGATCGACAGTTATGCGCCCGGCGAGCCCGCCGGCTATCCC
ACGCTGTGCAAGGGACGCTTCGAGGTGCAGGGCGAGCGCGGCTACGTGCTGGAAGAGCCCACGAGCCTCAACGCACTCTC
TTTGTTGCCAGCGCTGATCGACATCGGCATCGCTGCCATCAAGATCGAAGGCCGCCAGCGCAGCCCGCGCTATGTGGCGG
ACGTGGTCGGCGTGCTGCGCGCCGCCATCGACGCGGCCTGTGCCGAGCCCGCGCGTTTCACGCCGCGCCAGGAATGGCAA
GGCACGCTGGGCCGCCATGCCGAAGGCGACCAGGTCACGCAGGGCGCCTATGACAGGCCGTGGCGATGA

Upstream 100 bases:

>100_bases
CGTCATGGCGCGGTTTGAGCGCGGTCAAGTCCGCTCGCCAAGTGGCTGGCTAGCATCTGCGCTGGCCGAATTCCCGCGCC
GCGCTCGCGGCGCCTGTGAC

Downstream 100 bases:

>100_bases
GCGCGGCAACCTTCCAATCACGGAGCCATTGATGCGGAATACCTCCACCCCGGGCACGGCTAGCTTCGGCATTGCGCTGG
GCCCTCTGCTGTACTACTGG

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTISSSVRARHPQLVAPAGSLTALRAALEHGADAVYLGLRDATNARNFGGLNFTEADIRTGVAEAHARDAEVLFAINTFP
QTGEVAKWQRAVDAAADLGADAVIMADAGLMAYASERHPQLRLHLSVQGSATHADAIELMRERFNVKRVVLPRVLSLAQI
GKLARQTSVELEVFGFGSLCVMAEGRCLLSSYATGDSPNNKGVCSPAHAVRWTEQDGTMHARLSGILIDSYAPGEPAGYP
TLCKGRFEVQGERGYVLEEPTSLNALSLLPALIDIGIAAIKIEGRQRSPRYVADVVGVLRAAIDAACAEPARFTPRQEWQ
GTLGRHAEGDQVTQGAYDRPWR

Sequences:

>Translated_342_residues
MTISSSVRARHPQLVAPAGSLTALRAALEHGADAVYLGLRDATNARNFGGLNFTEADIRTGVAEAHARDAEVLFAINTFP
QTGEVAKWQRAVDAAADLGADAVIMADAGLMAYASERHPQLRLHLSVQGSATHADAIELMRERFNVKRVVLPRVLSLAQI
GKLARQTSVELEVFGFGSLCVMAEGRCLLSSYATGDSPNNKGVCSPAHAVRWTEQDGTMHARLSGILIDSYAPGEPAGYP
TLCKGRFEVQGERGYVLEEPTSLNALSLLPALIDIGIAAIKIEGRQRSPRYVADVVGVLRAAIDAACAEPARFTPRQEWQ
GTLGRHAEGDQVTQGAYDRPWR
>Mature_341_residues
TISSSVRARHPQLVAPAGSLTALRAALEHGADAVYLGLRDATNARNFGGLNFTEADIRTGVAEAHARDAEVLFAINTFPQ
TGEVAKWQRAVDAAADLGADAVIMADAGLMAYASERHPQLRLHLSVQGSATHADAIELMRERFNVKRVVLPRVLSLAQIG
KLARQTSVELEVFGFGSLCVMAEGRCLLSSYATGDSPNNKGVCSPAHAVRWTEQDGTMHARLSGILIDSYAPGEPAGYPT
LCKGRFEVQGERGYVLEEPTSLNALSLLPALIDIGIAAIKIEGRQRSPRYVADVVGVLRAAIDAACAEPARFTPRQEWQG
TLGRHAEGDQVTQGAYDRPWR

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=330, Percent_Identity=56.6666666666667, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI1788397, Length=318, Percent_Identity=32.0754716981132, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI87081910, Length=318, Percent_Identity=27.6729559748428, Blast_Score=98, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 36735; Mature: 36604

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISSSVRARHPQLVAPAGSLTALRAALEHGADAVYLGLRDATNARNFGGLNFTEADIRT
CCCCCCCHHCCCEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
GVAEAHARDAEVLFAINTFPQTGEVAKWQRAVDAAADLGADAVIMADAGLMAYASERHPQ
HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCE
LRLHLSVQGSATHADAIELMRERFNVKRVVLPRVLSLAQIGKLARQTSVELEVFGFGSLC
EEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEE
VMAEGRCLLSSYATGDSPNNKGVCSPAHAVRWTEQDGTMHARLSGILIDSYAPGEPAGYP
EEECCCEEEECCCCCCCCCCCCCCCCHHHEEEECCCCCEEEEEEEEEEECCCCCCCCCCC
TLCKGRFEVQGERGYVLEEPTSLNALSLLPALIDIGIAAIKIEGRQRSPRYVADVVGVLR
CEECCEEEEECCCCEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHH
AAIDAACAEPARFTPRQEWQGTLGRHAEGDQVTQGAYDRPWR
HHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TISSSVRARHPQLVAPAGSLTALRAALEHGADAVYLGLRDATNARNFGGLNFTEADIRT
CCCCCCHHCCCEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
GVAEAHARDAEVLFAINTFPQTGEVAKWQRAVDAAADLGADAVIMADAGLMAYASERHPQ
HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCE
LRLHLSVQGSATHADAIELMRERFNVKRVVLPRVLSLAQIGKLARQTSVELEVFGFGSLC
EEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEE
VMAEGRCLLSSYATGDSPNNKGVCSPAHAVRWTEQDGTMHARLSGILIDSYAPGEPAGYP
EEECCCEEEECCCCCCCCCCCCCCCCHHHEEEECCCCCEEEEEEEEEEECCCCCCCCCCC
TLCKGRFEVQGERGYVLEEPTSLNALSLLPALIDIGIAAIKIEGRQRSPRYVADVVGVLR
CEECCEEEEECCCCEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHH
AAIDAACAEPARFTPRQEWQGTLGRHAEGDQVTQGAYDRPWR
HHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]