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The map label for this gene is ytfE [C]

Identifier: 73538881

GI number: 73538881

Start: 1795433

End: 1796110

Strand: Reverse

Name: ytfE [C]

Synonym: Reut_B5056

Alternate gene names: 73538881

Gene position: 1796110-1795433 (Counterclockwise)

Preceding gene: 73538883

Following gene: 73538880

Centisome position: 65.88

GC content: 66.08

Gene sequence:

>678_bases
ATGCGCTTGCAAGACCAGCCTCTGGGCCAGCTGGCCCGCCGGATTCCTGGTGCCACCGGCATCTTCCACGGCTATGACCT
CGACTTCTGCTGCGGCGGCAAGCAGACGCTGCGCGATGCCGCGGTTGCCAAGGGACTCGACGCCGATGCCATCGAATCGC
GTTTGCAGACCCTGCAGCGCGACAGCGAGCCCGTGCAGACCGATTGGGGTGCGGTGCCGCCGGCCTCACTGATTGCCCAC
ATCCTCACGCGTTTCCACGAGCGTCATCGCGAACAGCTTCCGGAACTGATCCGCCTCGCCCGCCGCGTGGAGCACGTGCA
CGGCGACCGGCCGGATTGTCCGGTCGGGCTGGCCGACCATCTGGTGGCGATGCGCAGCGAACTGGAAGCGCATATGCAGA
AGGAAGAACAGATCCTGTTCCCGATGCTCGCGCGCGGGCTGCAGGCGGCCGCCACGGCGCCGATCACGGTCATGCGCATG
GAGCATGACGACCACGGCGAAGCGCTGCAGCGGCTGGCCGCACTGACCAACGACATCACGCTGCCGCGCGCTGCATGCAA
TACCTGGCGCGCGCTGTACCTGGGCCTGCGCACGCTGCGTGAAGACCTGATGGAACACATCCATCTGGAAAACAACATCC
TGTTCGAGCCGGCCGCAGTGGTCGCAGCGAACGACTGA

Upstream 100 bases:

>100_bases
GAATTATACCGTTAGAAATATAACTCAATGATTCTATTCAGATAAAAACTGGCACGGTACTCGCGTAGTGATCTCCGACA
CATTCGACAAGGAGCACATG

Downstream 100 bases:

>100_bases
GTCCTCCGGACACATCCCCAAGGATACTAACCAACAAGCGAGCCTCATCATGGGTCCCTATCGCAGACTCTGGTTCCTGC
TGATCGCCGTGCTGGCGGTC

Product: iron-sulfur cluster repair di-iron protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRLQDQPLGQLARRIPGATGIFHGYDLDFCCGGKQTLRDAAVAKGLDADAIESRLQTLQRDSEPVQTDWGAVPPASLIAH
ILTRFHERHREQLPELIRLARRVEHVHGDRPDCPVGLADHLVAMRSELEAHMQKEEQILFPMLARGLQAAATAPITVMRM
EHDDHGEALQRLAALTNDITLPRAACNTWRALYLGLRTLREDLMEHIHLENNILFEPAAVVAAND

Sequences:

>Translated_225_residues
MRLQDQPLGQLARRIPGATGIFHGYDLDFCCGGKQTLRDAAVAKGLDADAIESRLQTLQRDSEPVQTDWGAVPPASLIAH
ILTRFHERHREQLPELIRLARRVEHVHGDRPDCPVGLADHLVAMRSELEAHMQKEEQILFPMLARGLQAAATAPITVMRM
EHDDHGEALQRLAALTNDITLPRAACNTWRALYLGLRTLREDLMEHIHLENNILFEPAAVVAAND
>Mature_225_residues
MRLQDQPLGQLARRIPGATGIFHGYDLDFCCGGKQTLRDAAVAKGLDADAIESRLQTLQRDSEPVQTDWGAVPPASLIAH
ILTRFHERHREQLPELIRLARRVEHVHGDRPDCPVGLADHLVAMRSELEAHMQKEEQILFPMLARGLQAAATAPITVMRM
EHDDHGEALQRLAALTNDITLPRAACNTWRALYLGLRTLREDLMEHIHLENNILFEPAAVVAAND

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=215, Percent_Identity=51.6279069767442, Blast_Score=239, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 25169; Mature: 25169

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQDQPLGQLARRIPGATGIFHGYDLDFCCGGKQTLRDAAVAKGLDADAIESRLQTLQR
CCCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
DSEPVQTDWGAVPPASLIAHILTRFHERHREQLPELIRLARRVEHVHGDRPDCPVGLADH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LVAMRSELEAHMQKEEQILFPMLARGLQAAATAPITVMRMEHDDHGEALQRLAALTNDIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCC
LPRAACNTWRALYLGLRTLREDLMEHIHLENNILFEPAAVVAAND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCC
>Mature Secondary Structure
MRLQDQPLGQLARRIPGATGIFHGYDLDFCCGGKQTLRDAAVAKGLDADAIESRLQTLQR
CCCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
DSEPVQTDWGAVPPASLIAHILTRFHERHREQLPELIRLARRVEHVHGDRPDCPVGLADH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LVAMRSELEAHMQKEEQILFPMLARGLQAAATAPITVMRMEHDDHGEALQRLAALTNDIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCC
LPRAACNTWRALYLGLRTLREDLMEHIHLENNILFEPAAVVAAND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA