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The map label for this gene is yddU [C]

Identifier: 73538488

GI number: 73538488

Start: 1354104

End: 1354541

Strand: Reverse

Name: yddU [C]

Synonym: Reut_B4662

Alternate gene names: 73538488

Gene position: 1354541-1354104 (Counterclockwise)

Preceding gene: 73538489

Following gene: 73538487

Centisome position: 49.69

GC content: 61.19

Gene sequence:

>438_bases
ATGCAAGCCAGCATCGACTACGAGCAACTGGTTTCCGCCATCGGTGACGCCGTCATCATCTCCGACGCTAACGGCGCCAT
CACGCTCTGGAACCCGGCAGCCGAACGCATGTTCGGCTACACGCAGGCCGAAGCGATGGGCCAGTCGCTGGACCTGATCA
TTCCGGAGCGGTTGCGCGGCCGCCATTGGGAGGGCTACGACAAGACCATGGCCACGGGCATCACGCGTTACGGCCACGAC
CTGTTGAAGGTGCCGGCAGTCGACAAGAACGGCAAGTCGATGTCCATCGCCTTTACCGTGGCGCTGCTGCACGGTGACGA
TGGCAAGATTTCGGGCATTGTCGCCATCATTCGCGATGAAACCGTGCGTTTCCAGGAAGAGCGGGCGCTGCGCAAACGCA
TTACCGAACTTGAGGCGCAGTTGAAAGTCGGCGCCTGA

Upstream 100 bases:

>100_bases
GAAGCGCACAGCTGTGCCAAACTGCATTGCGGCACGTGCCGCGAATCTTTACCGCCAACCTTTACACCCTGCCGCAATGT
CCGGCAAAGAGGGGATCCCC

Downstream 100 bases:

>100_bases
CGCCGGCATGCGCGGTCAAGTGCCACAACAGCTGGTTTGCGAGAGCCGGGAAGAGTATCTCGTTCTCGCAAGACCGGTGT
CAGTCCAGTTCCGACCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: PAS Sensor Protein; Transcriptional Regulator; Sensory Box Protein; Multi-Sensor Signal Transduction Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Sensory Box Histidine Kinase/Response Regulator; Hybrid Sensor Histidine Kinase; Two-Component Hybrid Sensor And Regulator; Histidine Kinase; Response Sensor Protein; Signal-Transducing Histidine Kinase; Diguanylate Cyclase With PAS/PAC Sensor; PAS/PAC Domain-Containing Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Regulatory Protein; Two Component Sensor Histidine Kinase; Two-Component System Sensory/Regulatory Protein Putative; PAS/PAC Sensor Hybrid Histidine Kinase; Signal Sensor Protein Isolated PAS Domain; Globin; Sensory Box/GGDEF Family Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQASIDYEQLVSAIGDAVIISDANGAITLWNPAAERMFGYTQAEAMGQSLDLIIPERLRGRHWEGYDKTMATGITRYGHD
LLKVPAVDKNGKSMSIAFTVALLHGDDGKISGIVAIIRDETVRFQEERALRKRITELEAQLKVGA

Sequences:

>Translated_145_residues
MQASIDYEQLVSAIGDAVIISDANGAITLWNPAAERMFGYTQAEAMGQSLDLIIPERLRGRHWEGYDKTMATGITRYGHD
LLKVPAVDKNGKSMSIAFTVALLHGDDGKISGIVAIIRDETVRFQEERALRKRITELEAQLKVGA
>Mature_145_residues
MQASIDYEQLVSAIGDAVIISDANGAITLWNPAAERMFGYTQAEAMGQSLDLIIPERLRGRHWEGYDKTMATGITRYGHD
LLKVPAVDKNGKSMSIAFTVALLHGDDGKISGIVAIIRDETVRFQEERALRKRITELEAQLKVGA

Specific function: Unknown

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15959; Mature: 15959

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASIDYEQLVSAIGDAVIISDANGAITLWNPAAERMFGYTQAEAMGQSLDLIIPERLRG
CCCCCCHHHHHHHCCCEEEEECCCCEEEEECHHHHHHHCHHHHHHCCCCCCEEECHHHCC
RHWEGYDKTMATGITRYGHDLLKVPAVDKNGKSMSIAFTVALLHGDDGKISGIVAIIRDE
CCCCCCHHHHHHHHHHHCCHHEECCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEECC
TVRFQEERALRKRITELEAQLKVGA
CHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQASIDYEQLVSAIGDAVIISDANGAITLWNPAAERMFGYTQAEAMGQSLDLIIPERLRG
CCCCCCHHHHHHHCCCEEEEECCCCEEEEECHHHHHHHCHHHHHHCCCCCCEEECHHHCC
RHWEGYDKTMATGITRYGHDLLKVPAVDKNGKSMSIAFTVALLHGDDGKISGIVAIIRDE
CCCCCCHHHHHHHHHHHCCHHEECCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEECC
TVRFQEERALRKRITELEAQLKVGA
CHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA