| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is yfeW [C]
Identifier: 73538475
GI number: 73538475
Start: 1336358
End: 1337614
Strand: Reverse
Name: yfeW [C]
Synonym: Reut_B4649
Alternate gene names: 73538475
Gene position: 1337614-1336358 (Counterclockwise)
Preceding gene: 73538476
Following gene: 73538474
Centisome position: 49.07
GC content: 63.33
Gene sequence:
>1257_bases ATGCAAGGCAGGGAAACACAAGGAATGTCGCGCGAGCGGCTTGCGCGCATTGAACGTTTCATCGACGAATCCTATGTCGC GAATGGCAAGCTGCCCGGCGCGCTGGTCCAGGTATGGCGCCGCGGCGAACTGGCGCTGAACTCTGTCCTTGGCGTCGCTG ACCGGGAACGGCAGGTGCCGCTGGCCGAGGATTCGATCTTCCGCATCTATTCGATGACCAAGCCCGTGACTTCCGTCGCG ATCATGATGCTGGTCGAGCAATGCAAGATCGCGCTGGATGACCCGGTCAGCAAGTACATCCCGGCATGGGAGAAACTGGG CGTTCACGCAGGCGGCTTCATGGAGAGCTTCCAGACGAAGCCCGCCGCGCGACCGATGCTGGTGGTCGACCTGCTGCGCC ACACCTCGGGCCTGACCTACGGCTTCCAGCAGAACACCAACGTCGACGCGGCTTACCGCAAGCTGAAGCTGGGCGAGCTT GCCACCGAAGGCACGCTCGACGAAATGATCGACAAGCTGGCGGGGCTGCCGCTCGAATTCTCGCCGGGCGAGGCCTGGAA CTACTCGGTGTCGACCGACGTGCTTGGCTACCTGGTCGGCAAGGTCAGCGGCATTCCGTTCGATACCTTCCTGAAGGAAC GTATCTTCGAGCCGCTGGGTATGGTGGACACGGGCTTCCATGTGCCGGAAGACAAGGTGGCGCGCTTTTGCGCGTGCTAT GCGATCGGTGTGCTCGGTTCGAAGGTCATATCGAACAAGGGGCCCATGCTGCAGGACGACCCGCGCGCCAGTCCGTACCT GAAGCCGCCTAGCTTCATTTCGGGCGGTGGCGGGCTCGTGTCGACCGCCGCGGACTACATGCGCTTCGCGCGCATGCTGC TGCAAGGCGGAGAACTCGACGGCGTGAGGCTGCTCGGGCCCAAGACGCTGAAACTGATGACCGCCAACCACCTGCCCGGC GGAGTGGACCTGCCGGCCATGTCACGCTCGATGTTCAGCGAAGCGACCTATGACGGCGTGGGGTTTGGCCTGGGCTTTGC CACCACCGTAACGCCCGCGTCCACGCTGATTCCCGGCAGCGCGGGTGATTTCTTCTGGGGTGGTGCAGCAAGCACTTTCT TCTGGGTGGACCCGCAGGAGGATCTTATCGGTCTCTTCCTGACCCAGTTGTTGCCCTCTTCGGCATATCCCGTGCGACGC CAACTGCGCACGCTCGTCTACAGCGCCATCACGGAGCCGGGGGCTGCGCCGCGCTGA
Upstream 100 bases:
>100_bases CGCTTGCGCTTGGCGCGAACGGGCGGCCAATGTCATGATGGCAGGGACGCCGCTTGCGGCGGCACGTCGGCCAAGGCAAA AACCCGGGAGAGAGGTGACT
Downstream 100 bases:
>100_bases ATGCCCGTGGGGTCCGGGGAAGGCTAAAATATGGTTATGTGACACCAGCCGGAAACCGGACACATTGGCATGAGGAAGGC AAACACTCTGATCATCGCGA
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MQGRETQGMSRERLARIERFIDESYVANGKLPGALVQVWRRGELALNSVLGVADRERQVPLAEDSIFRIYSMTKPVTSVA IMMLVEQCKIALDDPVSKYIPAWEKLGVHAGGFMESFQTKPAARPMLVVDLLRHTSGLTYGFQQNTNVDAAYRKLKLGEL ATEGTLDEMIDKLAGLPLEFSPGEAWNYSVSTDVLGYLVGKVSGIPFDTFLKERIFEPLGMVDTGFHVPEDKVARFCACY AIGVLGSKVISNKGPMLQDDPRASPYLKPPSFISGGGGLVSTAADYMRFARMLLQGGELDGVRLLGPKTLKLMTANHLPG GVDLPAMSRSMFSEATYDGVGFGLGFATTVTPASTLIPGSAGDFFWGGAASTFFWVDPQEDLIGLFLTQLLPSSAYPVRR QLRTLVYSAITEPGAAPR
Sequences:
>Translated_418_residues MQGRETQGMSRERLARIERFIDESYVANGKLPGALVQVWRRGELALNSVLGVADRERQVPLAEDSIFRIYSMTKPVTSVA IMMLVEQCKIALDDPVSKYIPAWEKLGVHAGGFMESFQTKPAARPMLVVDLLRHTSGLTYGFQQNTNVDAAYRKLKLGEL ATEGTLDEMIDKLAGLPLEFSPGEAWNYSVSTDVLGYLVGKVSGIPFDTFLKERIFEPLGMVDTGFHVPEDKVARFCACY AIGVLGSKVISNKGPMLQDDPRASPYLKPPSFISGGGGLVSTAADYMRFARMLLQGGELDGVRLLGPKTLKLMTANHLPG GVDLPAMSRSMFSEATYDGVGFGLGFATTVTPASTLIPGSAGDFFWGGAASTFFWVDPQEDLIGLFLTQLLPSSAYPVRR QLRTLVYSAITEPGAAPR >Mature_418_residues MQGRETQGMSRERLARIERFIDESYVANGKLPGALVQVWRRGELALNSVLGVADRERQVPLAEDSIFRIYSMTKPVTSVA IMMLVEQCKIALDDPVSKYIPAWEKLGVHAGGFMESFQTKPAARPMLVVDLLRHTSGLTYGFQQNTNVDAAYRKLKLGEL ATEGTLDEMIDKLAGLPLEFSPGEAWNYSVSTDVLGYLVGKVSGIPFDTFLKERIFEPLGMVDTGFHVPEDKVARFCACY AIGVLGSKVISNKGPMLQDDPRASPYLKPPSFISGGGGLVSTAADYMRFARMLLQGGELDGVRLLGPKTLKLMTANHLPG GVDLPAMSRSMFSEATYDGVGFGLGFATTVTPASTLIPGSAGDFFWGGAASTFFWVDPQEDLIGLFLTQLLPSSAYPVRR QLRTLVYSAITEPGAAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082101, Length=407, Percent_Identity=24.8157248157248, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1786574, Length=279, Percent_Identity=26.5232974910394, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17550934, Length=212, Percent_Identity=29.2452830188679, Blast_Score=92, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 45453; Mature: 45453
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGRETQGMSRERLARIERFIDESYVANGKLPGALVQVWRRGELALNSVLGVADRERQVP CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC LAEDSIFRIYSMTKPVTSVAIMMLVEQCKIALDDPVSKYIPAWEKLGVHAGGFMESFQTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCHHHHHHCCC PAARPMLVVDLLRHTSGLTYGFQQNTNVDAAYRKLKLGELATEGTLDEMIDKLAGLPLEF CCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC SPGEAWNYSVSTDVLGYLVGKVSGIPFDTFLKERIFEPLGMVDTGFHVPEDKVARFCACY CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AIGVLGSKVISNKGPMLQDDPRASPYLKPPSFISGGGGLVSTAADYMRFARMLLQGGELD HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GVRLLGPKTLKLMTANHLPGGVDLPAMSRSMFSEATYDGVGFGLGFATTVTPASTLIPGS CEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHCCCHHHHCCCHHHCCCCC AGDFFWGGAASTFFWVDPQEDLIGLFLTQLLPSSAYPVRRQLRTLVYSAITEPGAAPR CCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQGRETQGMSRERLARIERFIDESYVANGKLPGALVQVWRRGELALNSVLGVADRERQVP CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC LAEDSIFRIYSMTKPVTSVAIMMLVEQCKIALDDPVSKYIPAWEKLGVHAGGFMESFQTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCHHHHHHCCC PAARPMLVVDLLRHTSGLTYGFQQNTNVDAAYRKLKLGELATEGTLDEMIDKLAGLPLEF CCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC SPGEAWNYSVSTDVLGYLVGKVSGIPFDTFLKERIFEPLGMVDTGFHVPEDKVARFCACY CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AIGVLGSKVISNKGPMLQDDPRASPYLKPPSFISGGGGLVSTAADYMRFARMLLQGGELD HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GVRLLGPKTLKLMTANHLPGGVDLPAMSRSMFSEATYDGVGFGLGFATTVTPASTLIPGS CEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHCCCHHHHCCCHHHCCCCC AGDFFWGGAASTFFWVDPQEDLIGLFLTQLLPSSAYPVRRQLRTLVYSAITEPGAAPR CCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]