| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is 73538460
Identifier: 73538460
GI number: 73538460
Start: 1320437
End: 1321261
Strand: Reverse
Name: 73538460
Synonym: Reut_B4633
Alternate gene names: NA
Gene position: 1321261-1320437 (Counterclockwise)
Preceding gene: 73538462
Following gene: 73538459
Centisome position: 48.47
GC content: 65.82
Gene sequence:
>825_bases ATGGCACGCAAACTGGTTCTGAGCCTGCTCGCCGTCGCATTGACGGCGTGCAGCGGTACGCCTCTGACGCCGTCGAGTCC CCCGGCGAGTCAGCCTGGCGCGTCATCCACCAGCGCAAGCACTCCGCCGCCGGCGAGCACGGCGCAAGCGGACGCGAAGG CGGTGGACCCCGCGGCCATCAAGGCGCTACAGGATATGGGCGCGTACCTGCAGACCCTGAAGCAGTTCCAGGTCACCATC AACCTGACCGGCGAGCGCGTCCTGCAGGATGGACAGAAGCTCCAGCACACGGCGACGGCCGACCTGGACATCGTGCGACC GAACAGGCTGCGCGCGGAAATGCGCAGCGCGCGCTCGCAGCGCGACCTGATCTACGACGGCAAGACCGTCACGCTCTACC AGCCCGAACAGAAGTACTACTCGCAGGCCCCGTTCAACGACAACCTGGGCGCCCTGACCGAGCGGCTGAGGGAGCGGTTC GGCATTGAAGTGCCGTCAGCCGACCTGTTCCTGTGGGGCACGCCGGCGGCGCCCGTCGACAACATCCAGTCGGCGATGAA CGCCGGGCAGGACATCATCGTGGGCGAGCTGTGCGACCACTACGCGTTCCGGCAGGGAGATTTCGACTGGCAGATCTGGA TCTCGGCCAATGGGCGCCCGCTGCCGCGCAAGCTGGTCGTCACGAGCCGTGCCGACGAGGCACGTCCACAGTCGATCACC TACTACAAGTGGAACCTGAATCCGAAGTTCGGCAATACGACCTTCGCCTTCAAGCCGCCGGCTGGCGCCAAGTCCGCCGA GTTCGTTCCCATGAAGTCGCGCTAA
Upstream 100 bases:
>100_bases TTTGCGCCCAAGCCATCGCGAACGCACGTGGCGTATGCATCGGTGACGCGATAGCCCTGAACGTGGCTACCAACGGCAGT ACTCTCTGACGGAGTTCACC
Downstream 100 bases:
>100_bases GGAGCCCGCCATGAAATACGCAGATCGCAAGCTGTTCACGGTGTGCATGGCCGCGCTCGCGCTGGCGGCATCCGGCTTGG CGCCCACGGCGCAGGCACGT
Product: putative periplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MARKLVLSLLAVALTACSGTPLTPSSPPASQPGASSTSASTPPPASTAQADAKAVDPAAIKALQDMGAYLQTLKQFQVTI NLTGERVLQDGQKLQHTATADLDIVRPNRLRAEMRSARSQRDLIYDGKTVTLYQPEQKYYSQAPFNDNLGALTERLRERF GIEVPSADLFLWGTPAAPVDNIQSAMNAGQDIIVGELCDHYAFRQGDFDWQIWISANGRPLPRKLVVTSRADEARPQSIT YYKWNLNPKFGNTTFAFKPPAGAKSAEFVPMKSR
Sequences:
>Translated_274_residues MARKLVLSLLAVALTACSGTPLTPSSPPASQPGASSTSASTPPPASTAQADAKAVDPAAIKALQDMGAYLQTLKQFQVTI NLTGERVLQDGQKLQHTATADLDIVRPNRLRAEMRSARSQRDLIYDGKTVTLYQPEQKYYSQAPFNDNLGALTERLRERF GIEVPSADLFLWGTPAAPVDNIQSAMNAGQDIIVGELCDHYAFRQGDFDWQIWISANGRPLPRKLVVTSRADEARPQSIT YYKWNLNPKFGNTTFAFKPPAGAKSAEFVPMKSR >Mature_273_residues ARKLVLSLLAVALTACSGTPLTPSSPPASQPGASSTSASTPPPASTAQADAKAVDPAAIKALQDMGAYLQTLKQFQVTIN LTGERVLQDGQKLQHTATADLDIVRPNRLRAEMRSARSQRDLIYDGKTVTLYQPEQKYYSQAPFNDNLGALTERLRERFG IEVPSADLFLWGTPAAPVDNIQSAMNAGQDIIVGELCDHYAFRQGDFDWQIWISANGRPLPRKLVVTSRADEARPQSITY YKWNLNPKFGNTTFAFKPPAGAKSAEFVPMKSR
Specific function: Unknown
COG id: COG3900
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29954; Mature: 29823
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKLVLSLLAVALTACSGTPLTPSSPPASQPGASSTSASTPPPASTAQADAKAVDPAAI CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHH KALQDMGAYLQTLKQFQVTINLTGERVLQDGQKLQHTATADLDIVRPNRLRAEMRSARSQ HHHHHHHHHHHHHHHEEEEEEECHHHHHHCCHHHHHHCCCCEEEECCHHHHHHHHHHHHH RDLIYDGKTVTLYQPEQKYYSQAPFNDNLGALTERLRERFGIEVPSADLFLWGTPAAPVD CCEEECCCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH NIQSAMNAGQDIIVGELCDHYAFRQGDFDWQIWISANGRPLPRKLVVTSRADEARPQSIT HHHHHHHCCCCEEHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEE YYKWNLNPKFGNTTFAFKPPAGAKSAEFVPMKSR EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure ARKLVLSLLAVALTACSGTPLTPSSPPASQPGASSTSASTPPPASTAQADAKAVDPAAI HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHH KALQDMGAYLQTLKQFQVTINLTGERVLQDGQKLQHTATADLDIVRPNRLRAEMRSARSQ HHHHHHHHHHHHHHHEEEEEEECHHHHHHCCHHHHHHCCCCEEEECCHHHHHHHHHHHHH RDLIYDGKTVTLYQPEQKYYSQAPFNDNLGALTERLRERFGIEVPSADLFLWGTPAAPVD CCEEECCCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH NIQSAMNAGQDIIVGELCDHYAFRQGDFDWQIWISANGRPLPRKLVVTSRADEARPQSIT HHHHHHHCCCCEEHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEE YYKWNLNPKFGNTTFAFKPPAGAKSAEFVPMKSR EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA