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The map label for this gene is yecD [C]

Identifier: 73538445

GI number: 73538445

Start: 1305823

End: 1306479

Strand: Reverse

Name: yecD [C]

Synonym: Reut_B4618

Alternate gene names: 73538445

Gene position: 1306479-1305823 (Counterclockwise)

Preceding gene: 73538446

Following gene: 73538443

Centisome position: 47.92

GC content: 61.04

Gene sequence:

>657_bases
ATGTCGCCGCCCGTTGATTGTGGATCCGTCGATTCGGCAAGCCATCGGCAGCACAATGAAGGCGCCGCCGATGCGGACAG
CGTGACCACGCGGATTCCGGCGATTGTTCCGGCGCAAACCGCACTGGTGGTCATGCACTATCAGACCGACATCCTGCAGT
TGTTCCCGTCGGTCGCACCTGCGTTGCTGACCAATACACGCAAGCTGTGTGATGCTGCGCGGGCCGGGGGCGTGGGCGTC
TATTTCGCCAAGATCCACTTCAGCCCGGGTTATCCGGAAATCAGTCCCTTGAACCGGAACGGGCAGGGTATCCGGCAACT
GGGTCTGTTTGTCGACGACCAGATCTCGCCGGAACTCGGCCGGCAGGCGTCCGAACCGCTGATCATCGCGCATCGGGCCA
GCGTGTTCTTTGGTACCGACCTGCAGGTCCGGCTTTCCGCGCAGGGGATCGACACGCTGCTGATGGCGGGCATTGCGTCG
ACTGGCGTGGTGCTGTCTTCGGTGGCGTACGCGAGTGACGCGGATTTTCGGCTGTTCACGGTAAAGGACTGTTGCTACGA
CCCCGATCCGGTCGTCCACGAACATCTTTTTTCAACAGCGTTTGATTCGCGCACAACCGTGCTCTCGCTCGCAGATGCCT
TGTCACTGCTTGCCTGA

Upstream 100 bases:

>100_bases
ATGCGCTGGACCATGGCGCCAACAGCGTGGCGGTGGCGAGGGCCTAGACTGCGGGCACACACGTGATAGAGTCGGTCATC
CTTCTCTATCGAGTCGCCCT

Downstream 100 bases:

>100_bases
CGGCGGCGGGGAATTCGCCTACGCAGCGTAGGGCGCGTTGCCAGACGGTTTCAGTCCGGTGGAACGCTCAGTCGTGCACG
AAACTGGCCGATTGATAGAC

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase; Pyrimidine Utilization Protein B; Isochorismatase Family Protein; Isochorismatase-Family Hydrolase; Isochorismatase Hydrolase Family Protein; Amidase; Hydrolase Protein; Amidase Related Nicotinamidase; Isochorismatase Family; Isochorismatase Family Hydrolase; N-Carbamoylsarcosine Amidase; Hydrolase; Isochorismate Hydrolase

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSPPVDCGSVDSASHRQHNEGAADADSVTTRIPAIVPAQTALVVMHYQTDILQLFPSVAPALLTNTRKLCDAARAGGVGV
YFAKIHFSPGYPEISPLNRNGQGIRQLGLFVDDQISPELGRQASEPLIIAHRASVFFGTDLQVRLSAQGIDTLLMAGIAS
TGVVLSSVAYASDADFRLFTVKDCCYDPDPVVHEHLFSTAFDSRTTVLSLADALSLLA

Sequences:

>Translated_218_residues
MSPPVDCGSVDSASHRQHNEGAADADSVTTRIPAIVPAQTALVVMHYQTDILQLFPSVAPALLTNTRKLCDAARAGGVGV
YFAKIHFSPGYPEISPLNRNGQGIRQLGLFVDDQISPELGRQASEPLIIAHRASVFFGTDLQVRLSAQGIDTLLMAGIAS
TGVVLSSVAYASDADFRLFTVKDCCYDPDPVVHEHLFSTAFDSRTTVLSLADALSLLA
>Mature_217_residues
SPPVDCGSVDSASHRQHNEGAADADSVTTRIPAIVPAQTALVVMHYQTDILQLFPSVAPALLTNTRKLCDAARAGGVGVY
FAKIHFSPGYPEISPLNRNGQGIRQLGLFVDDQISPELGRQASEPLIIAHRASVFFGTDLQVRLSAQGIDTLLMAGIAST
GVVLSSVAYASDADFRLFTVKDCCYDPDPVVHEHLFSTAFDSRTTVLSLADALSLLA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23211; Mature: 23079

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPVDCGSVDSASHRQHNEGAADADSVTTRIPAIVPAQTALVVMHYQTDILQLFPSVAP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEECCCCEEEEEEEHHHHHHHHHHHHHH
ALLTNTRKLCDAARAGGVGVYFAKIHFSPGYPEISPLNRNGQGIRQLGLFVDDQISPELG
HHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHC
RQASEPLIIAHRASVFFGTDLQVRLSAQGIDTLLMAGIASTGVVLSSVAYASDADFRLFT
CCCCCCEEEEEECEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
VKDCCYDPDPVVHEHLFSTAFDSRTTVLSLADALSLLA
ECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPPVDCGSVDSASHRQHNEGAADADSVTTRIPAIVPAQTALVVMHYQTDILQLFPSVAP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEECCCCEEEEEEEHHHHHHHHHHHHHH
ALLTNTRKLCDAARAGGVGVYFAKIHFSPGYPEISPLNRNGQGIRQLGLFVDDQISPELG
HHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHC
RQASEPLIIAHRASVFFGTDLQVRLSAQGIDTLLMAGIASTGVVLSSVAYASDADFRLFT
CCCCCCEEEEEECEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
VKDCCYDPDPVVHEHLFSTAFDSRTTVLSLADALSLLA
ECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA