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The map label for this gene is ygeX [H]

Identifier: 73538360

GI number: 73538360

Start: 1206284

End: 1207516

Strand: Direct

Name: ygeX [H]

Synonym: Reut_B4533

Alternate gene names: 73538360

Gene position: 1206284-1207516 (Clockwise)

Preceding gene: 73538359

Following gene: 73538361

Centisome position: 44.25

GC content: 68.69

Gene sequence:

>1233_bases
TTGAACCACCCGCTCCCCAACCTGAAGCTGCAGTGCGCGCTGAACCCGGCGGCCACGCCCGGCGCGCCATACGGCACCCG
CCAGCGAGCCGTACTCGGCGGCGAAGCCTTTGCCCGCGCAGCCACGCAGATCCGCCGCTGGCCCGGCTATACGCCGACGC
CGCTGGTTGCGCTCGACGGCCTGGCACGCGCCGCCGGCGTTGCCAGCATCCTCTACAAGGACGAAGGCGGCCGCTTCGGG
CTGGGCAGCTTCAAGGCACTCGGGGGCGCCTACGCGGTCAGCCGCCTGCTGTTGCGCGAGATCGAAAGCCGGCTCGGCGT
CAGCAACGTATCGGTCGATGACATGCTCGCGGGCCGCTACGCCGACGTGGTGCGCGACATCACCGTGACGTGCGCGACCG
ACGGCAACCACGGCCGCTCGGTCGCCTGGGGCGCGCAGCGCTTTGGCTGCCAGTGCGTGATCTATATCCACGCCACGGTC
AGCGAGGGCCGCAAGACGGCCATCGAACAATACGGCGCGCAGGTGATCCGCACCGCCGGAAACTACGACGATTCCGTGCG
CCAGGCGGCGGAAGACGCGGCACGGCTCGGCCGCTTCGTGGTGTCCGACACTTCCTACGAAGGCTATATGGAAGTGCCAA
AGGACGTCATGCAAGGTTACGCGGTGATGGCCGATGAAGCGCTTCAGCAGATGCCTCAGGGCGAGCTTCCGACCCACGTG
TTCCTTCAGGGCGGCGTAGGCGGCCTTGCCGCAGCGGTGTCGGCGCACTTCTGGGAAGTGCTCGGCAACGCGCGTCCGCG
CTTCATCGTGGTGGAGCCGGACAAGGCGGCCTGCCTGTACGAGAGCGCACGTGCTGGCAAGCCGGTGGCAGTCCATGGCG
ACCTCGACACGGTGATGGCTGGCCTCGCCTGCGGCGAGGTCTCGCTGCTCGCGTGGGAGATCCTGCATCCCGGCGCCCAC
GCGTTCCTGACCATCGACGACGAATCGGCACTCGACTGCGTGCGTCTGCTCGCCGACAGTCCCTATGGTGATGCGCCCGT
CGTCGCAGGCGAATCCGCTGTGGCAGGACTGGCTGGCAGTCTCGGCGCGCTGGCCGCCCCTGCAGTGCGCGACGCGCTCG
GCCTGAATGCCGACAGCCGCATCCTGGTGTTCGGCAGCGAAGGCGCCACCGACGTGGCCCTCTACGAGCGCATCGTCGGC
CGCCTGCCTGAAGACGTGAGGAAAGCGGCGTGA

Upstream 100 bases:

>100_bases
GGCGACACGGCGCGCGAGCGGCTCGAAGAAATCGAGTCGTTACACGACCACTACGGCGACCTTCATCGCTAGTGAACGAA
ACCTGATCAAGGAGACTGTC

Downstream 100 bases:

>100_bases
AGCCAGATCACACTCTCCAGCGACCCGCACGGATCGACCTGCCGCGCCTGCTGCGCCGGATCGCCGCGCTCGCCGAAGTC
GGCGCCATCGACGGCGGTGG

Product: diaminopropionate ammonia-lyase

Products: NA

Alternate protein names: Diaminopropionatase; Alpha,beta-diaminopropionate ammonia-lyase [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MNHPLPNLKLQCALNPAATPGAPYGTRQRAVLGGEAFARAATQIRRWPGYTPTPLVALDGLARAAGVASILYKDEGGRFG
LGSFKALGGAYAVSRLLLREIESRLGVSNVSVDDMLAGRYADVVRDITVTCATDGNHGRSVAWGAQRFGCQCVIYIHATV
SEGRKTAIEQYGAQVIRTAGNYDDSVRQAAEDAARLGRFVVSDTSYEGYMEVPKDVMQGYAVMADEALQQMPQGELPTHV
FLQGGVGGLAAAVSAHFWEVLGNARPRFIVVEPDKAACLYESARAGKPVAVHGDLDTVMAGLACGEVSLLAWEILHPGAH
AFLTIDDESALDCVRLLADSPYGDAPVVAGESAVAGLAGSLGALAAPAVRDALGLNADSRILVFGSEGATDVALYERIVG
RLPEDVRKAA

Sequences:

>Translated_410_residues
MNHPLPNLKLQCALNPAATPGAPYGTRQRAVLGGEAFARAATQIRRWPGYTPTPLVALDGLARAAGVASILYKDEGGRFG
LGSFKALGGAYAVSRLLLREIESRLGVSNVSVDDMLAGRYADVVRDITVTCATDGNHGRSVAWGAQRFGCQCVIYIHATV
SEGRKTAIEQYGAQVIRTAGNYDDSVRQAAEDAARLGRFVVSDTSYEGYMEVPKDVMQGYAVMADEALQQMPQGELPTHV
FLQGGVGGLAAAVSAHFWEVLGNARPRFIVVEPDKAACLYESARAGKPVAVHGDLDTVMAGLACGEVSLLAWEILHPGAH
AFLTIDDESALDCVRLLADSPYGDAPVVAGESAVAGLAGSLGALAAPAVRDALGLNADSRILVFGSEGATDVALYERIVG
RLPEDVRKAA
>Mature_410_residues
MNHPLPNLKLQCALNPAATPGAPYGTRQRAVLGGEAFARAATQIRRWPGYTPTPLVALDGLARAAGVASILYKDEGGRFG
LGSFKALGGAYAVSRLLLREIESRLGVSNVSVDDMLAGRYADVVRDITVTCATDGNHGRSVAWGAQRFGCQCVIYIHATV
SEGRKTAIEQYGAQVIRTAGNYDDSVRQAAEDAARLGRFVVSDTSYEGYMEVPKDVMQGYAVMADEALQQMPQGELPTHV
FLQGGVGGLAAAVSAHFWEVLGNARPRFIVVEPDKAACLYESARAGKPVAVHGDLDTVMAGLACGEVSLLAWEILHPGAH
AFLTIDDESALDCVRLLADSPYGDAPVVAGESAVAGLAGSLGALAAPAVRDALGLNADSRILVFGSEGATDVALYERIVG
RLPEDVRKAA

Specific function: Catalyzes the alpha,beta-elimination reaction of both L- and D-alpha,beta-diaminopropionate, the most suitable substrates to form pyruvate and ammonia. The L- and D-isomers of serine are also degraded, though slowly; it is the only serine dehydratase whic

COG id: COG1171

COG function: function code E; Threonine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789235, Length=378, Percent_Identity=43.1216931216931, Blast_Score=271, Evalue=5e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010081
- InterPro:   IPR019871
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.15 [H]

Molecular weight: Translated: 43078; Mature: 43078

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHPLPNLKLQCALNPAATPGAPYGTRQRAVLGGEAFARAATQIRRWPGYTPTPLVALDG
CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHH
LARAAGVASILYKDEGGRFGLGSFKALGGAYAVSRLLLREIESRLGVSNVSVDDMLAGRY
HHHHHHHEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ADVVRDITVTCATDGNHGRSVAWGAQRFGCQCVIYIHATVSEGRKTAIEQYGAQVIRTAG
HHHHHCEEEEEECCCCCCCEEECCHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCC
NYDDSVRQAAEDAARLGRFVVSDTSYEGYMEVPKDVMQGYAVMADEALQQMPQGELPTHV
CCCHHHHHHHHHHHHHHHEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEE
FLQGGVGGLAAAVSAHFWEVLGNARPRFIVVEPDKAACLYESARAGKPVAVHGDLDTVMA
EEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCEEEECCHHHHHH
GLACGEVSLLAWEILHPGAHAFLTIDDESALDCVRLLADSPYGDAPVVAGESAVAGLAGS
HHHCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHH
LGALAAPAVRDALGLNADSRILVFGSEGATDVALYERIVGRLPEDVRKAA
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MNHPLPNLKLQCALNPAATPGAPYGTRQRAVLGGEAFARAATQIRRWPGYTPTPLVALDG
CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHH
LARAAGVASILYKDEGGRFGLGSFKALGGAYAVSRLLLREIESRLGVSNVSVDDMLAGRY
HHHHHHHEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ADVVRDITVTCATDGNHGRSVAWGAQRFGCQCVIYIHATVSEGRKTAIEQYGAQVIRTAG
HHHHHCEEEEEECCCCCCCEEECCHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCC
NYDDSVRQAAEDAARLGRFVVSDTSYEGYMEVPKDVMQGYAVMADEALQQMPQGELPTHV
CCCHHHHHHHHHHHHHHHEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEE
FLQGGVGGLAAAVSAHFWEVLGNARPRFIVVEPDKAACLYESARAGKPVAVHGDLDTVMA
EEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCEEEECCHHHHHH
GLACGEVSLLAWEILHPGAHAFLTIDDESALDCVRLLADSPYGDAPVVAGESAVAGLAGS
HHHCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHH
LGALAAPAVRDALGLNADSRILVFGSEGATDVALYERIVGRLPEDVRKAA
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]