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The map label for this gene is bphP [H]

Identifier: 73538197

GI number: 73538197

Start: 1024155

End: 1025276

Strand: Direct

Name: bphP [H]

Synonym: Reut_B4368

Alternate gene names: 73538197

Gene position: 1024155-1025276 (Clockwise)

Preceding gene: 73538195

Following gene: 73538201

Centisome position: 37.57

GC content: 62.21

Gene sequence:

>1122_bases
ATGCGGCTAGCTGACTTCATCTTGCGCAACATCGAGCCCATTCTGGAGGAGTGGGAGACGTTTGCGGCCTCTCTGCTACC
GGCCGCGAAGGATCTGGATTCGATGGCCTTGCGCGACCATGCGCAACAGATCCTGCAGGCGATCGCGCACGACCTGACAA
TGCCCCAGACGCGCGACCAGCAGCGCCAGAAATCTCTGGGCCGTGCTCCGCAACTGAGCGGCGCACCCGAGACTGCCGCG
CAAACCCATGCGGTCCTGCGCGCGAGAAGCGGCTTTAATATCAACCAGCTGGCTGCCGAATATCGTGCACTTCGCGCCAG
CGTCCTGCGCTTGTGGATGGACCAGTGCGAGTCGGTTGCCCCGCATCTCGACGACATGATCCGGTTCAACGAGGCAATCG
ACCAGGCTCTGGCAGAATCGGTCAGTTTTTTCAGCATGCAAGTCGAGCAGGCGCACAACTTGCTGCTAGGCATGCTTGGG
CATGACATGCGCAGTCCCCTGCAAACCATCCGGATGACGGCCTCCTATCTTGCCGCGCTGAACGCGGGCGAAGCCGTTTC
AGATGCGGCGGCGCGGCTGATCCGCAGCGGTGCGCGCATGCAGACGCTTCTGGACGACCTGTGCGACTTCAACCGGACCA
AGCTCGGCCTGGGCGTCAACATCAGCCCGCGCGATGTCGATCTGGCCGAGGTTTTTGTTGATGTCGTGGACCAGTTGCGT
GCGTCCCATCCCGGCCGCCAGATCGATCTCGAGTTGACTGGCAAACTGCAGGGATACTGGGACGGTCAGCGCCTGCAGCA
ACTGCTGGGCAACCTTGTGCTCAATGCCATCAATTACGGTGCGCAGGACGCGCCGGTACGCGTGGTGGCAAGCGCGGACG
ATGACGAGGTGTGCTTTGAGGTCCGGAACATCGGGCCCGCCATTGACGAAGAGACACTGGAGCGCATGTTTGATCCGCTT
CAGCGCGGTCCTTGCCACACCGCCGTCAGTGATGCCCAGGCGGGACTAGGGCTGGGCCTTTATATCGCCAGTGAAATCGC
CAGGGCGCATCGCGGGTCCATCTACGTGCGTTCGGATAGTACAGAGACGGCGTTCGGCGTGAGGCTGCCGCGGCGCCCAT
AG

Upstream 100 bases:

>100_bases
CAGCGCGCGCCACAGACCTTGTGCGTCCCTGTTTTGCGGTTAATATGTTTTTCACAAGCCTGAAAGATGCAGTGCGTCAC
ATTTTCTCGTAGGGACACCT

Downstream 100 bases:

>100_bases
CGGGGCGGGCGCCGCTTTTCAGCATTTATGCAACCTCAGCGCCGGCCGATCTCCTGCAGCATCCGCGTCACGAGGTACAG
GCGCGGCACGATGGAATCGA

Product: histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRLADFILRNIEPILEEWETFAASLLPAAKDLDSMALRDHAQQILQAIAHDLTMPQTRDQQRQKSLGRAPQLSGAPETAA
QTHAVLRARSGFNINQLAAEYRALRASVLRLWMDQCESVAPHLDDMIRFNEAIDQALAESVSFFSMQVEQAHNLLLGMLG
HDMRSPLQTIRMTASYLAALNAGEAVSDAAARLIRSGARMQTLLDDLCDFNRTKLGLGVNISPRDVDLAEVFVDVVDQLR
ASHPGRQIDLELTGKLQGYWDGQRLQQLLGNLVLNAINYGAQDAPVRVVASADDDEVCFEVRNIGPAIDEETLERMFDPL
QRGPCHTAVSDAQAGLGLGLYIASEIARAHRGSIYVRSDSTETAFGVRLPRRP

Sequences:

>Translated_373_residues
MRLADFILRNIEPILEEWETFAASLLPAAKDLDSMALRDHAQQILQAIAHDLTMPQTRDQQRQKSLGRAPQLSGAPETAA
QTHAVLRARSGFNINQLAAEYRALRASVLRLWMDQCESVAPHLDDMIRFNEAIDQALAESVSFFSMQVEQAHNLLLGMLG
HDMRSPLQTIRMTASYLAALNAGEAVSDAAARLIRSGARMQTLLDDLCDFNRTKLGLGVNISPRDVDLAEVFVDVVDQLR
ASHPGRQIDLELTGKLQGYWDGQRLQQLLGNLVLNAINYGAQDAPVRVVASADDDEVCFEVRNIGPAIDEETLERMFDPL
QRGPCHTAVSDAQAGLGLGLYIASEIARAHRGSIYVRSDSTETAFGVRLPRRP
>Mature_373_residues
MRLADFILRNIEPILEEWETFAASLLPAAKDLDSMALRDHAQQILQAIAHDLTMPQTRDQQRQKSLGRAPQLSGAPETAA
QTHAVLRARSGFNINQLAAEYRALRASVLRLWMDQCESVAPHLDDMIRFNEAIDQALAESVSFFSMQVEQAHNLLLGMLG
HDMRSPLQTIRMTASYLAALNAGEAVSDAAARLIRSGARMQTLLDDLCDFNRTKLGLGVNISPRDVDLAEVFVDVVDQLR
ASHPGRQIDLELTGKLQGYWDGQRLQQLLGNLVLNAINYGAQDAPVRVVASADDDEVCFEVRNIGPAIDEETLERMFDPL
QRGPCHTAVSDAQAGLGLGLYIASEIARAHRGSIYVRSDSTETAFGVRLPRRP

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI87082128, Length=242, Percent_Identity=28.099173553719, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87081816, Length=235, Percent_Identity=28.0851063829787, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1786912, Length=230, Percent_Identity=30, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790861, Length=201, Percent_Identity=28.3582089552239, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI145693157, Length=232, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41160; Mature: 41160

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLADFILRNIEPILEEWETFAASLLPAAKDLDSMALRDHAQQILQAIAHDLTMPQTRDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QRQKSLGRAPQLSGAPETAAQTHAVLRARSGFNINQLAAEYRALRASVLRLWMDQCESVA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PHLDDMIRFNEAIDQALAESVSFFSMQVEQAHNLLLGMLGHDMRSPLQTIRMTASYLAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAGEAVSDAAARLIRSGARMQTLLDDLCDFNRTKLGLGVNISPRDVDLAEVFVDVVDQLR
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH
ASHPGRQIDLELTGKLQGYWDGQRLQQLLGNLVLNAINYGAQDAPVRVVASADDDEVCFE
HCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHH
VRNIGPAIDEETLERMFDPLQRGPCHTAVSDAQAGLGLGLYIASEIARAHRGSIYVRSDS
HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCC
TETAFGVRLPRRP
CCCCCCCCCCCCC
>Mature Secondary Structure
MRLADFILRNIEPILEEWETFAASLLPAAKDLDSMALRDHAQQILQAIAHDLTMPQTRDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QRQKSLGRAPQLSGAPETAAQTHAVLRARSGFNINQLAAEYRALRASVLRLWMDQCESVA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PHLDDMIRFNEAIDQALAESVSFFSMQVEQAHNLLLGMLGHDMRSPLQTIRMTASYLAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAGEAVSDAAARLIRSGARMQTLLDDLCDFNRTKLGLGVNISPRDVDLAEVFVDVVDQLR
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH
ASHPGRQIDLELTGKLQGYWDGQRLQQLLGNLVLNAINYGAQDAPVRVVASADDDEVCFE
HCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHH
VRNIGPAIDEETLERMFDPLQRGPCHTAVSDAQAGLGLGLYIASEIARAHRGSIYVRSDS
HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCC
TETAFGVRLPRRP
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]