| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is yebQ [H]
Identifier: 73538150
GI number: 73538150
Start: 977118
End: 978458
Strand: Reverse
Name: yebQ [H]
Synonym: Reut_B4320
Alternate gene names: 73538150
Gene position: 978458-977118 (Counterclockwise)
Preceding gene: 73538151
Following gene: 73538149
Centisome position: 35.89
GC content: 68.83
Gene sequence:
>1341_bases ATGACTGCGCGCGAGCGCCGCGGCATGGCCGCCATCATGATCGCCGTGGCCTTGGCCACGCTGGACACGGCGATCGCCAA CACCGCTCTGCCTTCGATCGCTGTGGATCTGCGCGCCACGCCGGCGGCGTCGGTGTGGGTGATCAATGCCTACCAGCTCG CGATGGTGGCGACCTTGCTGCCGTTCGCGGCGCTGGGCGGCATTCTTGGTCACCGGCGCATCTATATCGGCGGGGTAACG CTGTTCATCGCGGCTTCCGTAGTCTGCGCGCTGGCGTGGTCGCTGCCGTCGCTGGCGGCGGCGCGGGTGCTGCAGGGCAT CGGCGCGAGCGCCATCATGAGCGTCAATACGGCGCTGATCAGCGCGATCTTCCCGATCCAACGGCTCGGCCGCGGGGTAG GGCTCAATGCATTGGTGGTAGGGGTCTCGTTCGCACTGGGACCGACCGTGGCGTCGGTGATCCTGTCCTTCGGCTCGTGG CCGTGGCTATTTGCCGTGAACTTGCCGATTGGCCTGCTCGCGCTCGGCATCGCGCGCGGCGCGCTGCCGCAGACGCCGCG CAGCCAGCATGGCTTTGATCGCGTGGCGGCGCTGCTGAACGTGGTGGCTTTCGCCGCGCTGATCTTCGCACTCGGCGAGG GGGCACAGCGCGCGCCGCTGGAAGAGTCGCTGGCGGCCGCGGCCGTCTTCGTCGTCGCCTTCGGCCTGCTGCTGTGGCGC GAGCGCGGCCACCCGGCGCCGATGCTGCCCTTGGACCTGTTCCGCCGTCCGATGTTCGCGCTGTCGACGCTGACCGCGAT CTGCTCGTTTGCCGCGCAAGGCCTCGCCTTCGTTTCACTGCCGTTCTATTTCCAGCATGTGCTCGGGCGAGGCCAGGTGG AAACCGGCTTCCTGCTGACGCCATGGTCGGTTGTGGTCGCACTGATGGCGCCGATCGCGGGGCGCCTGTCCGATCGCTAT CCGCCGGGCCTGCTCGGTGGCGTCGGGCTGGCTGTGATGAGCGTCGGCATGGCGTCGCTCGCGCTGATGCCGGCCAACCC GAGTACGCTGGAGATCGGCATCCGCATGTGCATCTGTGGTGCGGGCTTCGGCTTTTTCCAGTCACCCAACCTGAAGGCGC TGATGGCCAGTGCGCCACGCGAGCGTAGCGGCGGTGCGAGCGGCGTGATTGCCACCGCGCGGCTGCTGGGCCAGGCCACG GGCGCGGCGCTTGTCGCGCTGAGCTTTGGCCTCGCTGGCGACCATGGACCCGGTCTGGCCCTTGCGCTGGGCGCCGGTTT TGCCGGCGTTGCGGCCATTGCCAGCGGCCTGCGGCTGGTGATGCCAGAAGTGAAGCACTGA
Upstream 100 bases:
>100_bases TGCCGGGCGATGAACCGGCCGCAAAGAGTCTCGCGCCGTGTCCAGTCCCGCCCCGATCCAAGCCGCTTCCCAGCCAGCGT CCGCCGCTGTCGCCCACGCC
Downstream 100 bases:
>100_bases CCGCACGGTCGGCCGAAAGCTGAGTCGCTTGGGTTTTGTATCGATCGATATATAATGTTTCATATCGATTGATACAAAAC GGCATCCGTCATGGCCAGAC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTARERRGMAAIMIAVALATLDTAIANTALPSIAVDLRATPAASVWVINAYQLAMVATLLPFAALGGILGHRRIYIGGVT LFIAASVVCALAWSLPSLAAARVLQGIGASAIMSVNTALISAIFPIQRLGRGVGLNALVVGVSFALGPTVASVILSFGSW PWLFAVNLPIGLLALGIARGALPQTPRSQHGFDRVAALLNVVAFAALIFALGEGAQRAPLEESLAAAAVFVVAFGLLLWR ERGHPAPMLPLDLFRRPMFALSTLTAICSFAAQGLAFVSLPFYFQHVLGRGQVETGFLLTPWSVVVALMAPIAGRLSDRY PPGLLGGVGLAVMSVGMASLALMPANPSTLEIGIRMCICGAGFGFFQSPNLKALMASAPRERSGGASGVIATARLLGQAT GAALVALSFGLAGDHGPGLALALGAGFAGVAAIASGLRLVMPEVKH
Sequences:
>Translated_446_residues MTARERRGMAAIMIAVALATLDTAIANTALPSIAVDLRATPAASVWVINAYQLAMVATLLPFAALGGILGHRRIYIGGVT LFIAASVVCALAWSLPSLAAARVLQGIGASAIMSVNTALISAIFPIQRLGRGVGLNALVVGVSFALGPTVASVILSFGSW PWLFAVNLPIGLLALGIARGALPQTPRSQHGFDRVAALLNVVAFAALIFALGEGAQRAPLEESLAAAAVFVVAFGLLLWR ERGHPAPMLPLDLFRRPMFALSTLTAICSFAAQGLAFVSLPFYFQHVLGRGQVETGFLLTPWSVVVALMAPIAGRLSDRY PPGLLGGVGLAVMSVGMASLALMPANPSTLEIGIRMCICGAGFGFFQSPNLKALMASAPRERSGGASGVIATARLLGQAT GAALVALSFGLAGDHGPGLALALGAGFAGVAAIASGLRLVMPEVKH >Mature_445_residues TARERRGMAAIMIAVALATLDTAIANTALPSIAVDLRATPAASVWVINAYQLAMVATLLPFAALGGILGHRRIYIGGVTL FIAASVVCALAWSLPSLAAARVLQGIGASAIMSVNTALISAIFPIQRLGRGVGLNALVVGVSFALGPTVASVILSFGSWP WLFAVNLPIGLLALGIARGALPQTPRSQHGFDRVAALLNVVAFAALIFALGEGAQRAPLEESLAAAAVFVVAFGLLLWRE RGHPAPMLPLDLFRRPMFALSTLTAICSFAAQGLAFVSLPFYFQHVLGRGQVETGFLLTPWSVVVALMAPIAGRLSDRYP PGLLGGVGLAVMSVGMASLALMPANPSTLEIGIRMCICGAGFGFFQSPNLKALMASAPRERSGGASGVIATARLLGQATG AALVALSFGLAGDHGPGLALALGAGFAGVAAIASGLRLVMPEVKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=444, Percent_Identity=51.1261261261261, Blast_Score=406, Evalue=1e-114, Organism=Escherichia coli, GI1790195, Length=312, Percent_Identity=32.0512820512821, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788710, Length=318, Percent_Identity=25.4716981132075, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1788392, Length=287, Percent_Identity=29.616724738676, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1789042, Length=323, Percent_Identity=26.3157894736842, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45669; Mature: 45538
Theoretical pI: Translated: 11.35; Mature: 11.35
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARERRGMAAIMIAVALATLDTAIANTALPSIAVDLRATPAASVWVINAYQLAMVATLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCEEEEEHHHHHHHHHHHH PFAALGGILGHRRIYIGGVTLFIAASVVCALAWSLPSLAAARVLQGIGASAIMSVNTALI HHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHH SAIFPIQRLGRGVGLNALVVGVSFALGPTVASVILSFGSWPWLFAVNLPIGLLALGIARG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHC ALPQTPRSQHGFDRVAALLNVVAFAALIFALGEGAQRAPLEESLAAAAVFVVAFGLLLWR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ERGHPAPMLPLDLFRRPMFALSTLTAICSFAAQGLAFVSLPFYFQHVLGRGQVETGFLLT HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEC PWSVVVALMAPIAGRLSDRYPPGLLGGVGLAVMSVGMASLALMPANPSTLEIGIRMCICG HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHEEEE AGFGFFQSPNLKALMASAPRERSGGASGVIATARLLGQATGAALVALSFGLAGDHGPGLA CCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE LALGAGFAGVAAIASGLRLVMPEVKH EECCCCHHHHHHHHCCHHHHCCCCCC >Mature Secondary Structure TARERRGMAAIMIAVALATLDTAIANTALPSIAVDLRATPAASVWVINAYQLAMVATLL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCEEEEEHHHHHHHHHHHH PFAALGGILGHRRIYIGGVTLFIAASVVCALAWSLPSLAAARVLQGIGASAIMSVNTALI HHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHH SAIFPIQRLGRGVGLNALVVGVSFALGPTVASVILSFGSWPWLFAVNLPIGLLALGIARG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHC ALPQTPRSQHGFDRVAALLNVVAFAALIFALGEGAQRAPLEESLAAAAVFVVAFGLLLWR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ERGHPAPMLPLDLFRRPMFALSTLTAICSFAAQGLAFVSLPFYFQHVLGRGQVETGFLLT HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEC PWSVVVALMAPIAGRLSDRYPPGLLGGVGLAVMSVGMASLALMPANPSTLEIGIRMCICG HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHEEEE AGFGFFQSPNLKALMASAPRERSGGASGVIATARLLGQATGAALVALSFGLAGDHGPGLA CCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE LALGAGFAGVAAIASGLRLVMPEVKH EECCCCHHHHHHHHCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]