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The map label for this gene is ybjK [C]

Identifier: 73538123

GI number: 73538123

Start: 953315

End: 953881

Strand: Reverse

Name: ybjK [C]

Synonym: Reut_B4293

Alternate gene names: 73538123

Gene position: 953881-953315 (Counterclockwise)

Preceding gene: 73538124

Following gene: 73538122

Centisome position: 34.99

GC content: 62.08

Gene sequence:

>567_bases
ATGAAAACGCAATCTGTTCGTGAGCAATTGCTCGAGCACACGCTTGTGCTGATCCGGCGTCGAGGCTTCAACGGCTTCAG
CTACCGGGATCTGGCCGAGCTCGTCGGCGTCAAGACGTCGAGCATCCACTATTACTTCCCGACCAAGGACGACCTTGTCC
TGGAGGCGGTGAAGACGTACAGCGCGGCGATGTCCGAGCGGCTCCGTTCGATCGATACGACGCTGCCCGTGACGGAGCAG
GCCGCTATCTACCTGGCCCCGTTTCGTGCGAGCTGTGGTTCGGACCAGATCTGCCTGTGCGGCATGCTTTCGGCCGAGAC
CTTGTGCCTGCCGGAATCCGTCCACAGTCTGCTGCAGACGTTCTTCCTGATGAATGAGCAATGGCTGACGGGCTTGCTGG
AGCGCGCACAGCCGCAGCGCAGCACACCGTTCCCGGTGCCACCACCGCGCCTGGCGCAGGTGGTGTTCGGGTCGCTGCAA
AGCGGGCTGATTTCGGCTCGCCTGTTTGGTACATCGGATCGTGTGGAAGCTGCGGCGGATACGCTCATGGCTGCCGTGAG
CGGCTAA

Upstream 100 bases:

>100_bases
CAGGTGGTCTAATTTCCACCGTAAGGCTAATCCTAGGGATTACCCGCGCCTTCAGGCGTTCTCGCTTGAGCGTCTATCTT
CATGTAGATAAACTGACCTC

Downstream 100 bases:

>100_bases
GACGCCGTCGGCCAGGCGCTGCCTGTAACCGCCATGTGGCGAATGCTGCATGGCGGTTTTATTTTTCCGTCGACCCAGGA
AGCAGAGTTGGTAGACTGAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Regulatory Protein Tetr; Transcriptional Regulator Of TetR Family Protein; TetR-Family Transcriptional Regulator; HTH-Type Protein SlmA; TetR Family Regulatory Protein; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKTQSVREQLLEHTLVLIRRRGFNGFSYRDLAELVGVKTSSIHYYFPTKDDLVLEAVKTYSAAMSERLRSIDTTLPVTEQ
AAIYLAPFRASCGSDQICLCGMLSAETLCLPESVHSLLQTFFLMNEQWLTGLLERAQPQRSTPFPVPPPRLAQVVFGSLQ
SGLISARLFGTSDRVEAAADTLMAAVSG

Sequences:

>Translated_188_residues
MKTQSVREQLLEHTLVLIRRRGFNGFSYRDLAELVGVKTSSIHYYFPTKDDLVLEAVKTYSAAMSERLRSIDTTLPVTEQ
AAIYLAPFRASCGSDQICLCGMLSAETLCLPESVHSLLQTFFLMNEQWLTGLLERAQPQRSTPFPVPPPRLAQVVFGSLQ
SGLISARLFGTSDRVEAAADTLMAAVSG
>Mature_188_residues
MKTQSVREQLLEHTLVLIRRRGFNGFSYRDLAELVGVKTSSIHYYFPTKDDLVLEAVKTYSAAMSERLRSIDTTLPVTEQ
AAIYLAPFRASCGSDQICLCGMLSAETLCLPESVHSLLQTFFLMNEQWLTGLLERAQPQRSTPFPVPPPRLAQVVFGSLQ
SGLISARLFGTSDRVEAAADTLMAAVSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20746; Mature: 20746

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQSVREQLLEHTLVLIRRRGFNGFSYRDLAELVGVKTSSIHYYFPTKDDLVLEAVKTY
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
SAAMSERLRSIDTTLPVTEQAAIYLAPFRASCGSDQICLCGMLSAETLCLPESVHSLLQT
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEECHHHHHHHHHH
FFLMNEQWLTGLLERAQPQRSTPFPVPPPRLAQVVFGSLQSGLISARLFGTSDRVEAAAD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
TLMAAVSG
HHHHHHCC
>Mature Secondary Structure
MKTQSVREQLLEHTLVLIRRRGFNGFSYRDLAELVGVKTSSIHYYFPTKDDLVLEAVKTY
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
SAAMSERLRSIDTTLPVTEQAAIYLAPFRASCGSDQICLCGMLSAETLCLPESVHSLLQT
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEECHHHHHHHHHH
FFLMNEQWLTGLLERAQPQRSTPFPVPPPRLAQVVFGSLQSGLISARLFGTSDRVEAAAD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
TLMAAVSG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA