| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is 73537974
Identifier: 73537974
GI number: 73537974
Start: 782180
End: 783640
Strand: Reverse
Name: 73537974
Synonym: Reut_B4143
Alternate gene names: NA
Gene position: 783640-782180 (Counterclockwise)
Preceding gene: 73537976
Following gene: 73537973
Centisome position: 28.75
GC content: 69.13
Gene sequence:
>1461_bases ATGAGCGCGATTCCCAGCATTCCGACCGATTCCATCATTGATCTCGACGCCGTTGCCCTGTCCCGGGCCATCCATGCGCG CGAGGTGTCGTGCGTGGAGGTGCTTGATGCCTACCTGAGCCAGATCGACCGCCACAACCCGCGCGTCAATGCCATTGTGG CGCCGATGGACCGGGATCCATTGCGAAAGCAGGCGGCGGGCCTCGATGACGAACTCGCCCGGGGGGCCAGCCGCGGTCCG TTGCACGGTTTTCCGCAGGCGCCCAAAGACATCATGCCGGCCGCCGGCATGGTCACCACCAAGGGCTCGCCGATCTTCGC CGGACAAGTCAGCCAGACCGACGCAGTGGTCTTCGAACGCATGCGCGCCGGCGGCGCGCTGTTCGTCGGCCGCACCAATT CACCCGAGTTCGGCCTGGGCGGCCACACGTACAACCCGATCTACGGCACCACGCGCAATGCCTGGGATCCGGCACGCTCG GCCGGCGGCAGCAGCGGCGGGGCGGCCGTAGCGGTGGCGCTGCGCATGCTTCCGGTGGCCGATGGCTCGGACATGATGGG ATCGCTGCGGACGCCGGCCGCGTTCAACCATGTCTATGGGCTGCGCACCTCGTTCGGCTGCGTGCCGCATGGCCCGTCCG AGGAAGTGTTCTTCCAGCAGTTCAGCGTAGCCGGCCCGATGGCGCGCAATGTGCCGGACCTGGCGTTGCTGCTGTCGGTT CAGGCGGGCTTCGACGCGCGCTTGCCGCTGACGCGCCGCACCGAAGCGCCCGGCAGCTTTGCGCTGCCGCCCGAGCGCGA CTGGGCTGGCGTGCGCATTGGCTGGCTCGGCGACCTCGGCGGCCACCTGCCGACCGAACCCGGCCTGCTTGATACATGCG TCATGGCGCTCAGCCATCTACGGGCGATCGGCTGCACAGTCGATGCCGCACTGCCGGATTTCAACCTCGAACGCCTGTGG CACGCATGGATCGACCTGCGCAGCTTTGCTGTGGCCGGCGCCAACGGCGCGCTGTACCGCGATCCCGCGAAGCGCGCGTT GCTCAAGCCGGAAGCCGTCTGGGAAATCGAGCGCGGGCTGGCGCTGTCAGGCTCCCGCGTGTACGAGGCCATGGCGATAC GTAGCACGTGGTACCAGACACTGCGCACGCTGTTCGAGCGCTTCGACTACCTCGTCATGCCGGCCGCGCAGGTGTTCCCG TTCGACGCCGATATGGACTGGCCCCATGCGATCGACGGGCGCGACATGGACACGTATCACCGCTGGATGCAGGCCGTGGT GCCCGCGACCATGGCCGGCCTGCCCGCGCTGGCCGCGCCCGCGGGCTTTGGCCGCGGCGGGCTGCCGGCCGGCATCCAGA TCATCGGCCCGGCGCAGGCGGACGCGGAGGTGCTGCAGCTTGGCCACGCCTATGACCAGGCGGGCGGCTTCTCGCGCGTG CGCAGCCCCTGGCTGGCGTAG
Upstream 100 bases:
>100_bases CGTTTGCGTTTTACGCAAGGGTATTTGAAAAATTCCTCGATTGTAGGAAAACCACGCCGCCCCTATGCTCTTTCCTGACC AGACAGGAGACAGGCTTCCC
Downstream 100 bases:
>100_bases GTGCCCGACCCGACCGACACATCGAGTTTGTCCACGGGCAGCAAGCTGCTGGCCGTGTTGACCGCATGGCTTCGTCTTTC CCCAAACAGCAGGCAGGAGT
Product: amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSAIPSIPTDSIIDLDAVALSRAIHAREVSCVEVLDAYLSQIDRHNPRVNAIVAPMDRDPLRKQAAGLDDELARGASRGP LHGFPQAPKDIMPAAGMVTTKGSPIFAGQVSQTDAVVFERMRAGGALFVGRTNSPEFGLGGHTYNPIYGTTRNAWDPARS AGGSSGGAAVAVALRMLPVADGSDMMGSLRTPAAFNHVYGLRTSFGCVPHGPSEEVFFQQFSVAGPMARNVPDLALLLSV QAGFDARLPLTRRTEAPGSFALPPERDWAGVRIGWLGDLGGHLPTEPGLLDTCVMALSHLRAIGCTVDAALPDFNLERLW HAWIDLRSFAVAGANGALYRDPAKRALLKPEAVWEIERGLALSGSRVYEAMAIRSTWYQTLRTLFERFDYLVMPAAQVFP FDADMDWPHAIDGRDMDTYHRWMQAVVPATMAGLPALAAPAGFGRGGLPAGIQIIGPAQADAEVLQLGHAYDQAGGFSRV RSPWLA
Sequences:
>Translated_486_residues MSAIPSIPTDSIIDLDAVALSRAIHAREVSCVEVLDAYLSQIDRHNPRVNAIVAPMDRDPLRKQAAGLDDELARGASRGP LHGFPQAPKDIMPAAGMVTTKGSPIFAGQVSQTDAVVFERMRAGGALFVGRTNSPEFGLGGHTYNPIYGTTRNAWDPARS AGGSSGGAAVAVALRMLPVADGSDMMGSLRTPAAFNHVYGLRTSFGCVPHGPSEEVFFQQFSVAGPMARNVPDLALLLSV QAGFDARLPLTRRTEAPGSFALPPERDWAGVRIGWLGDLGGHLPTEPGLLDTCVMALSHLRAIGCTVDAALPDFNLERLW HAWIDLRSFAVAGANGALYRDPAKRALLKPEAVWEIERGLALSGSRVYEAMAIRSTWYQTLRTLFERFDYLVMPAAQVFP FDADMDWPHAIDGRDMDTYHRWMQAVVPATMAGLPALAAPAGFGRGGLPAGIQIIGPAQADAEVLQLGHAYDQAGGFSRV RSPWLA >Mature_485_residues SAIPSIPTDSIIDLDAVALSRAIHAREVSCVEVLDAYLSQIDRHNPRVNAIVAPMDRDPLRKQAAGLDDELARGASRGPL HGFPQAPKDIMPAAGMVTTKGSPIFAGQVSQTDAVVFERMRAGGALFVGRTNSPEFGLGGHTYNPIYGTTRNAWDPARSA GGSSGGAAVAVALRMLPVADGSDMMGSLRTPAAFNHVYGLRTSFGCVPHGPSEEVFFQQFSVAGPMARNVPDLALLLSVQ AGFDARLPLTRRTEAPGSFALPPERDWAGVRIGWLGDLGGHLPTEPGLLDTCVMALSHLRAIGCTVDAALPDFNLERLWH AWIDLRSFAVAGANGALYRDPAKRALLKPEAVWEIERGLALSGSRVYEAMAIRSTWYQTLRTLFERFDYLVMPAAQVFPF DADMDWPHAIDGRDMDTYHRWMQAVVPATMAGLPALAAPAGFGRGGLPAGIQIIGPAQADAEVLQLGHAYDQAGGFSRVR SPWLA
Specific function: Unknown
COG id: COG0154
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI195972892, Length=516, Percent_Identity=25.3875968992248, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI222831590, Length=506, Percent_Identity=26.4822134387352, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI166795287, Length=213, Percent_Identity=27.2300469483568, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17537465, Length=253, Percent_Identity=30.4347826086957, Blast_Score=122, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17556264, Length=192, Percent_Identity=32.8125, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17543272, Length=447, Percent_Identity=25.9507829977629, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17538252, Length=316, Percent_Identity=27.5316455696203, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17556276, Length=275, Percent_Identity=31.2727272727273, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17556278, Length=275, Percent_Identity=31.2727272727273, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71990152, Length=220, Percent_Identity=28.1818181818182, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17538254, Length=195, Percent_Identity=26.1538461538462, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319685, Length=410, Percent_Identity=29.5121951219512, Blast_Score=97, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6320448, Length=228, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24648435, Length=465, Percent_Identity=24.0860215053763, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24648437, Length=465, Percent_Identity=24.0860215053763, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI45550774, Length=485, Percent_Identity=23.7113402061856, Blast_Score=112, Evalue=7e-25, Organism=Drosophila melanogaster, GI24652985, Length=260, Percent_Identity=32.3076923076923, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI19922090, Length=260, Percent_Identity=32.3076923076923, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24652981, Length=260, Percent_Identity=32.3076923076923, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24652983, Length=260, Percent_Identity=32.3076923076923, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24644968, Length=504, Percent_Identity=25.3968253968254, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI21356731, Length=268, Percent_Identity=29.1044776119403, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI161078093, Length=519, Percent_Identity=23.5067437379576, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI24648113, Length=431, Percent_Identity=28.538283062645, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24648441, Length=390, Percent_Identity=23.5897435897436, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24648439, Length=390, Percent_Identity=23.5897435897436, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 52068; Mature: 51937
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIPSIPTDSIIDLDAVALSRAIHAREVSCVEVLDAYLSQIDRHNPRVNAIVAPMDRDP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCH LRKQAAGLDDELARGASRGPLHGFPQAPKDIMPAAGMVTTKGSPIFAGQVSQTDAVVFER HHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEECCCEEEECCCCCHHHHHHHH MRAGGALFVGRTNSPEFGLGGHTYNPIYGTTRNAWDPARSAGGSSGGAAVAVALRMLPVA HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCC DGSDMMGSLRTPAAFNHVYGLRTSFGCVPHGPSEEVFFQQFSVAGPMARNVPDLALLLSV CCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHCCCCCEEEEEEH QAGFDARLPLTRRTEAPGSFALPPERDWAGVRIGWLGDLGGHLPTEPGLLDTCVMALSHL HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH RAIGCTVDAALPDFNLERLWHAWIDLRSFAVAGANGALYRDPAKRALLKPEAVWEIERGL HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEECCHHHHHHCCCHHHHHHHCCC ALSGSRVYEAMAIRSTWYQTLRTLFERFDYLVMPAAQVFPFDADMDWPHAIDGRDMDTYH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHCCCCCCCCCCCCCCCCCHHHHH RWMQAVVPATMAGLPALAAPAGFGRGGLPAGIQIIGPAQADAEVLQLGHAYDQAGGFSRV HHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHH RSPWLA CCCCCC >Mature Secondary Structure SAIPSIPTDSIIDLDAVALSRAIHAREVSCVEVLDAYLSQIDRHNPRVNAIVAPMDRDP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCH LRKQAAGLDDELARGASRGPLHGFPQAPKDIMPAAGMVTTKGSPIFAGQVSQTDAVVFER HHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEECCCEEEECCCCCHHHHHHHH MRAGGALFVGRTNSPEFGLGGHTYNPIYGTTRNAWDPARSAGGSSGGAAVAVALRMLPVA HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCC DGSDMMGSLRTPAAFNHVYGLRTSFGCVPHGPSEEVFFQQFSVAGPMARNVPDLALLLSV CCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHCCCCCEEEEEEH QAGFDARLPLTRRTEAPGSFALPPERDWAGVRIGWLGDLGGHLPTEPGLLDTCVMALSHL HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH RAIGCTVDAALPDFNLERLWHAWIDLRSFAVAGANGALYRDPAKRALLKPEAVWEIERGL HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEECCHHHHHHCCCHHHHHHHCCC ALSGSRVYEAMAIRSTWYQTLRTLFERFDYLVMPAAQVFPFDADMDWPHAIDGRDMDTYH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHCCCCCCCCCCCCCCCCCHHHHH RWMQAVVPATMAGLPALAAPAGFGRGGLPAGIQIIGPAQADAEVLQLGHAYDQAGGFSRV HHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHH RSPWLA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]