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The map label for this gene is rbsC [H]

Identifier: 73537966

GI number: 73537966

Start: 774529

End: 775494

Strand: Direct

Name: rbsC [H]

Synonym: Reut_B4135

Alternate gene names: 73537966

Gene position: 774529-775494 (Clockwise)

Preceding gene: 73537965

Following gene: 73537967

Centisome position: 28.41

GC content: 67.29

Gene sequence:

>966_bases
ATGAGCTCCGCCATCCTGAACATGCCGCTGTCCGCGGACTCCCGCGCGCTTGTCGGCCGCCTGCTGGCGCTGGCCGTGCT
GTGCGCGCTGCTGTCGGTATCGTCGGACGCGTTCCTGACGCTGGGCAACCTGCTCAATGTGCTGCGGCAGGCGAGCCTGC
TGTTCCTGCTCGCTTCTGGGCTGACGCTTGTGATCCTGACGGGCGGCCTCGACCTTTCCGTCGGGGCCAACGTGGCGATG
TCCGCGTGTCTGGCGGCAAGCGTCATGAAGGCGACGGAATCGACCATGCTCGGCGTAGGTGCCGGTCTCGGTTGCGGCGT
GCTGATCGGCCTGGCGAACGGCCTGCTGGTGGCTGCGCTGCGTATCCCGCCGTTCATTGCCACGTACGGCATGTTGTGGG
TGCTGCATGGCCTGACGTACTGGTTCATGGCGGGTGAAACCATCCACGGATTCGCGCCGGAATTCCGCGCCATCGGCAGC
GGCTACCTGTGGGGCGTGCCAGTGCCCGTGTTCCTGATGCTCGCCTTCCTGACAGCCGGCACGGTGATCTCCCAGAAGAC
CACCTACGGCCAGGAGATCTATGCGATCGGCGCCAACCCGGTCGCGGCGCGGCTCTCTGGCGTGCCGGTAACCTGTCGCC
TGCTGCTGGTCTACGTGGTCAGCGGCGCCATGGCCGGGCTGGCGAGCCTGGTGTTCCTGGCGCGCCTGAACTCCGCCGAA
GGCGATATCGGCGAAACGCTCACGCTGCCGGCCATCGCGGCGGTGCTGATCGGGGGCACATCGCTGTTCGGCGGCGTAGG
GCGGGTATCCGGCACGCTCGTCGGCGCCATCCTGCTGACGCTGGTGCTGAACGGCATGAACCTGCTCACGGTCAGCGCCA
ACTGGCAGCCGCTGGTGACCGGGGTCATCGTGGTGCTGGCGGTGGTCCTAGACACGCTGTCCCGTCGCCGTCTCGGCAAG
TCATGA

Upstream 100 bases:

>100_bases
ACGGCCTGAACCTGATCGGCGTGCAGTCTTCGGTGCAGGTGGCGGCCATCGGCCTGCTGGTGCTGGTGGTCCTGTTGATC
GAATCCTTCAAGGGGAAAGC

Downstream 100 bases:

>100_bases
AGCAAGTTCCCACACGTACGGAAAACATTCCAACGATCCCAGGAGAGAAGACATGCAAGCACGCAACCTGAAATCACTCG
CCGCCCTGCTCGCCTTCGGC

Product: inner-membrane translocator

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSSAILNMPLSADSRALVGRLLALAVLCALLSVSSDAFLTLGNLLNVLRQASLLFLLASGLTLVILTGGLDLSVGANVAM
SACLAASVMKATESTMLGVGAGLGCGVLIGLANGLLVAALRIPPFIATYGMLWVLHGLTYWFMAGETIHGFAPEFRAIGS
GYLWGVPVPVFLMLAFLTAGTVISQKTTYGQEIYAIGANPVAARLSGVPVTCRLLLVYVVSGAMAGLASLVFLARLNSAE
GDIGETLTLPAIAAVLIGGTSLFGGVGRVSGTLVGAILLTLVLNGMNLLTVSANWQPLVTGVIVVLAVVLDTLSRRRLGK
S

Sequences:

>Translated_321_residues
MSSAILNMPLSADSRALVGRLLALAVLCALLSVSSDAFLTLGNLLNVLRQASLLFLLASGLTLVILTGGLDLSVGANVAM
SACLAASVMKATESTMLGVGAGLGCGVLIGLANGLLVAALRIPPFIATYGMLWVLHGLTYWFMAGETIHGFAPEFRAIGS
GYLWGVPVPVFLMLAFLTAGTVISQKTTYGQEIYAIGANPVAARLSGVPVTCRLLLVYVVSGAMAGLASLVFLARLNSAE
GDIGETLTLPAIAAVLIGGTSLFGGVGRVSGTLVGAILLTLVLNGMNLLTVSANWQPLVTGVIVVLAVVLDTLSRRRLGK
S
>Mature_320_residues
SSAILNMPLSADSRALVGRLLALAVLCALLSVSSDAFLTLGNLLNVLRQASLLFLLASGLTLVILTGGLDLSVGANVAMS
ACLAASVMKATESTMLGVGAGLGCGVLIGLANGLLVAALRIPPFIATYGMLWVLHGLTYWFMAGETIHGFAPEFRAIGSG
YLWGVPVPVFLMLAFLTAGTVISQKTTYGQEIYAIGANPVAARLSGVPVTCRLLLVYVVSGAMAGLASLVFLARLNSAEG
DIGETLTLPAIAAVLIGGTSLFGGVGRVSGTLVGAILLTLVLNGMNLLTVSANWQPLVTGVIVVLAVVLDTLSRRRLGKS

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=299, Percent_Identity=41.8060200668896, Blast_Score=178, Evalue=4e-46,
Organism=Escherichia coli, GI1790524, Length=319, Percent_Identity=34.4827586206897, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1788896, Length=304, Percent_Identity=32.5657894736842, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI145693152, Length=298, Percent_Identity=33.8926174496644, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1788471, Length=321, Percent_Identity=35.202492211838, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI87082395, Length=274, Percent_Identity=33.5766423357664, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI145693214, Length=248, Percent_Identity=37.9032258064516, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789992, Length=138, Percent_Identity=42.7536231884058, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1787793, Length=277, Percent_Identity=33.2129963898917, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787794, Length=263, Percent_Identity=28.8973384030418, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32854; Mature: 32723

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAILNMPLSADSRALVGRLLALAVLCALLSVSSDAFLTLGNLLNVLRQASLLFLLASG
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
LTLVILTGGLDLSVGANVAMSACLAASVMKATESTMLGVGAGLGCGVLIGLANGLLVAAL
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RIPPFIATYGMLWVLHGLTYWFMAGETIHGFAPEFRAIGSGYLWGVPVPVFLMLAFLTAG
HCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH
TVISQKTTYGQEIYAIGANPVAARLSGVPVTCRLLLVYVVSGAMAGLASLVFLARLNSAE
HHHHCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GDIGETLTLPAIAAVLIGGTSLFGGVGRVSGTLVGAILLTLVLNGMNLLTVSANWQPLVT
CCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
GVIVVLAVVLDTLSRRRLGKS
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSAILNMPLSADSRALVGRLLALAVLCALLSVSSDAFLTLGNLLNVLRQASLLFLLASG
CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
LTLVILTGGLDLSVGANVAMSACLAASVMKATESTMLGVGAGLGCGVLIGLANGLLVAAL
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RIPPFIATYGMLWVLHGLTYWFMAGETIHGFAPEFRAIGSGYLWGVPVPVFLMLAFLTAG
HCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH
TVISQKTTYGQEIYAIGANPVAARLSGVPVTCRLLLVYVVSGAMAGLASLVFLARLNSAE
HHHHCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GDIGETLTLPAIAAVLIGGTSLFGGVGRVSGTLVGAILLTLVLNGMNLLTVSANWQPLVT
CCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
GVIVVLAVVLDTLSRRRLGKS
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]