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The map label for this gene is vdlD [H]

Identifier: 73537873

GI number: 73537873

Start: 683148

End: 683633

Strand: Direct

Name: vdlD [H]

Synonym: Reut_B4040

Alternate gene names: 73537873

Gene position: 683148-683633 (Clockwise)

Preceding gene: 73537872

Following gene: 73537874

Centisome position: 25.06

GC content: 62.55

Gene sequence:

>486_bases
ATGAACGACCAGTCCCACCAGCTTTCCATGACCGTGCTGATGACGCCGGACATGGCCAACTTCTCCGGCAACGTGCACGG
CGGCACCATCCTGAAGTACCTGGATATGGTCGCGTATGCGTGCGCAAGCCGTTACGCAGGCCGTTACGTGGTCACCCTCT
CGGTAGACCAGGTAGTGTTCCGCCAGCCGATCCACGTCGGCGAGCTGGTGACCTTCCTCGCGGCCGTGAACTACACCGGC
CGCAGCTCCATGGAAATCGGCATCAAGGTGGTGACCGAGAACATCCGCAGCAAGCTGGTGCGCCATACCAACAGCTGTTA
TTTCACGATGGTCGCCGTCGATGACAATGGCGCACCGGCAGAGGTGCCACCGCTGGAACCGCGCGACGAAGTCGAGCGCC
AGCGCTTCGCCTCGGCCCAGCAGCGCCGCGCACTGCGCCAGGAAATGGAAAAGCGGCACGACGCCATCAAGTCGTCCGGG
AACTGA

Upstream 100 bases:

>100_bases
TGGCGCTCCTGCCATTTCGCATGACCCGCCCTGGTGCCCCCGAGCGCCGGTTTACGGGTTACACTGCCGCGCCTCGGCCC
CCGCTACCTGCGTCACCACC

Downstream 100 bases:

>100_bases
TCCGGCCATGGCACGCTTCCTTTCCCTGCTTGCCGGCGCCTGCCTCGCGGTGGCGGGTACGCATGCGCTGGCCGAGGAAA
TCGGCAGCGTCAATACGAAC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MNDQSHQLSMTVLMTPDMANFSGNVHGGTILKYLDMVAYACASRYAGRYVVTLSVDQVVFRQPIHVGELVTFLAAVNYTG
RSSMEIGIKVVTENIRSKLVRHTNSCYFTMVAVDDNGAPAEVPPLEPRDEVERQRFASAQQRRALRQEMEKRHDAIKSSG
N

Sequences:

>Translated_161_residues
MNDQSHQLSMTVLMTPDMANFSGNVHGGTILKYLDMVAYACASRYAGRYVVTLSVDQVVFRQPIHVGELVTFLAAVNYTG
RSSMEIGIKVVTENIRSKLVRHTNSCYFTMVAVDDNGAPAEVPPLEPRDEVERQRFASAQQRRALRQEMEKRHDAIKSSG
N
>Mature_161_residues
MNDQSHQLSMTVLMTPDMANFSGNVHGGTILKYLDMVAYACASRYAGRYVVTLSVDQVVFRQPIHVGELVTFLAAVNYTG
RSSMEIGIKVVTENIRSKLVRHTNSCYFTMVAVDDNGAPAEVPPLEPRDEVERQRFASAQQRRALRQEMEKRHDAIKSSG
N

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI22165355, Length=140, Percent_Identity=32.8571428571429, Blast_Score=74, Evalue=5e-14,
Organism=Homo sapiens, GI22165400, Length=140, Percent_Identity=32.8571428571429, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI32528284, Length=147, Percent_Identity=32.6530612244898, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI32528286, Length=147, Percent_Identity=32.6530612244898, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75709208, Length=147, Percent_Identity=32.6530612244898, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI32528282, Length=138, Percent_Identity=32.6086956521739, Blast_Score=71, Evalue=3e-13,
Organism=Homo sapiens, GI18640736, Length=135, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18008; Mature: 18008

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDQSHQLSMTVLMTPDMANFSGNVHGGTILKYLDMVAYACASRYAGRYVVTLSVDQVVF
CCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHH
RQPIHVGELVTFLAAVNYTGRSSMEIGIKVVTENIRSKLVRHTNSCYFTMVAVDDNGAPA
HCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC
EVPPLEPRDEVERQRFASAQQRRALRQEMEKRHDAIKSSGN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNDQSHQLSMTVLMTPDMANFSGNVHGGTILKYLDMVAYACASRYAGRYVVTLSVDQVVF
CCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHH
RQPIHVGELVTFLAAVNYTGRSSMEIGIKVVTENIRSKLVRHTNSCYFTMVAVDDNGAPA
HCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC
EVPPLEPRDEVERQRFASAQQRRALRQEMEKRHDAIKSSGN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]