| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is arnT [H]
Identifier: 73537812
GI number: 73537812
Start: 616198
End: 617919
Strand: Reverse
Name: arnT [H]
Synonym: Reut_B3979
Alternate gene names: 73537812
Gene position: 617919-616198 (Counterclockwise)
Preceding gene: 73537813
Following gene: 73537811
Centisome position: 22.67
GC content: 64.98
Gene sequence:
>1722_bases ATGCGTAGTTCCTCGACCTCGCGCTATGCCGGGCTGTCAGTTGGCGTTATCGCCCTGATCAGTCTGGGCATCCTGCTGGT CTGGTTCGGCACGCTCGACATGCGGCACCTGCTGCGCTCGGACGAAGGCCGCTACGCGGAAATTGCCCGCGAGATGTTTG TCACCGGCGACTGGGTCACGATCCGCTACCAGGCGCTCAAGTACTTCGAGAAGCCGCCTTTCCACCTGTGGGCGACCGCG CTGTCCTATACGCTGTTTGGCATTGGCGACTGGCAGGCGCGGCTCTGCGTGGCGCTGTCCGGGGCAATCGGCCTGCTGGT TTCCGTGCTCGCCGCGCACCGCTGGTTCGGCGCACGCGCTGCCGTGCTCACCGGATTCGTGATGGTCGCTGCACCGATGT GGAACGTGGCCGCGCATTTCAATTCGCTGGATATGACGCTGTCCGGCGCCATGGCCTGCGTGCTTGCCTTCATGCTGCTC GCGCAGCATCCCCACGCCACACTGGCGGCGCGCCGCAACTGGATGCTGGCGTGCTGGGTGGCCATGGGCGTCGCCGTCCT GACCAAAGGCCTGGTCGGTATCGCGCTGCCCGGCCTTGTGCTCGTCGTCTACACGCTCGTCACGCGGGATTTCGGCCTGT GGCTTCGCCTGCATCTGGTGTCCGGCATCGTGCTGATGCTCGTGGTCACGGTGCCATGGTTCTGGCTGGTGTCGGAGCGC AATCCCGAATTCCTGAACTTCTTCTTCATCCACGAACACTGGCAGCGTTACACCTCGACGGTGCATTCGCGCAAGGGTCC GCTGTGGTTCTTCGTGCCGTTGCTGGTGGCGGGCTTCCTGCCGTGGCTGGGCGCATTCCCGGGCATGTGGCAAGCGGTGC GCGAACGCGCAGGCGTGGAGCGCGGCAGCGTCGCGCGGCCATTCCAGCCGGCGCTGCTTGCTGCGATCTGGGCCATTGCG ATCTTCGTGTTCTTCAGCCTGTCGGGCTCGAAGCTGCCAGGCTATATCGTGCCGATCTTCCCGGCGCTGGGCATCCTGGC CGGCGTGGCACTCGACACCGCGACGGAACGCTCATGGCGGCGCCAGGTGAACTTCATGCTGGTCCTGGGCGTGCTCGGCC TGCTCGCCACGCCTTATGTGGCAACCCTCGACAAGCCCAGCACGCCAAACGTGGTCTATCGCGAGTTCGCGCTGTGGGTA GGCTTGGCCTTCGCCTGCATGCTGGCTGGCGCGTTGCTTGCACGGCACCTGCTGCGCACGCGTGGGGTATTTGCAAGCGT CGTCGCCTATGCTGTGGCCATGTTCCTGTGCGCGACACTTGCCTTCCGCGGGCATGAAGCCATGGGGCGTCCCGCTTCCG GCGCTGACCTGGTTCCTGCGATCAACGCGGTGCTGACGCCCGATATGCCGATTTACAGCGTGCGGCTGCTCGATCACACC CTGCCGTTCTACCTTCGCCGCACCGTCATCCTCGTCGAGCACCCCGACGAACTGGAGTTCGGTGTGGGCCAGGAGCCGCA GAAATGGATTCCCACCGTCGATGCCTTTGCCGAACGCTGGAGACAAGGCCCGCACGCCATTGCCATGATGTCGGCCGAGA CGTTCGCCGACCTGACGGCGCGCGGCGTCCCGATGTTTACCATCGGCCAGGACAAGCGTCGCATCGTCGTGGCAAATTTC CCGCTGCCGGCAACCGCCCGGCCTCAATCTTCGAAGGACTGA
Upstream 100 bases:
>100_bases TGACCGGCACAGCCCGTGATGCGCCGGGGCGGCGCTGGCCGGCTCCCTGTCGCGCCAAGCGGCGCAAGCCATTCATCCGT CGACATTTCCAGGGAGTTCT
Downstream 100 bases:
>100_bases ACCCGGCGCCATGACGCTATCGACTTTCGCTTTCATCTTCACCGGCGTGCTGCTCAATGCCGCCGCGCAACTGCTGCTCA AGGCCGGCGTCAACGCCGTC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MRSSSTSRYAGLSVGVIALISLGILLVWFGTLDMRHLLRSDEGRYAEIAREMFVTGDWVTIRYQALKYFEKPPFHLWATA LSYTLFGIGDWQARLCVALSGAIGLLVSVLAAHRWFGARAAVLTGFVMVAAPMWNVAAHFNSLDMTLSGAMACVLAFMLL AQHPHATLAARRNWMLACWVAMGVAVLTKGLVGIALPGLVLVVYTLVTRDFGLWLRLHLVSGIVLMLVVTVPWFWLVSER NPEFLNFFFIHEHWQRYTSTVHSRKGPLWFFVPLLVAGFLPWLGAFPGMWQAVRERAGVERGSVARPFQPALLAAIWAIA IFVFFSLSGSKLPGYIVPIFPALGILAGVALDTATERSWRRQVNFMLVLGVLGLLATPYVATLDKPSTPNVVYREFALWV GLAFACMLAGALLARHLLRTRGVFASVVAYAVAMFLCATLAFRGHEAMGRPASGADLVPAINAVLTPDMPIYSVRLLDHT LPFYLRRTVILVEHPDELEFGVGQEPQKWIPTVDAFAERWRQGPHAIAMMSAETFADLTARGVPMFTIGQDKRRIVVANF PLPATARPQSSKD
Sequences:
>Translated_573_residues MRSSSTSRYAGLSVGVIALISLGILLVWFGTLDMRHLLRSDEGRYAEIAREMFVTGDWVTIRYQALKYFEKPPFHLWATA LSYTLFGIGDWQARLCVALSGAIGLLVSVLAAHRWFGARAAVLTGFVMVAAPMWNVAAHFNSLDMTLSGAMACVLAFMLL AQHPHATLAARRNWMLACWVAMGVAVLTKGLVGIALPGLVLVVYTLVTRDFGLWLRLHLVSGIVLMLVVTVPWFWLVSER NPEFLNFFFIHEHWQRYTSTVHSRKGPLWFFVPLLVAGFLPWLGAFPGMWQAVRERAGVERGSVARPFQPALLAAIWAIA IFVFFSLSGSKLPGYIVPIFPALGILAGVALDTATERSWRRQVNFMLVLGVLGLLATPYVATLDKPSTPNVVYREFALWV GLAFACMLAGALLARHLLRTRGVFASVVAYAVAMFLCATLAFRGHEAMGRPASGADLVPAINAVLTPDMPIYSVRLLDHT LPFYLRRTVILVEHPDELEFGVGQEPQKWIPTVDAFAERWRQGPHAIAMMSAETFADLTARGVPMFTIGQDKRRIVVANF PLPATARPQSSKD >Mature_573_residues MRSSSTSRYAGLSVGVIALISLGILLVWFGTLDMRHLLRSDEGRYAEIAREMFVTGDWVTIRYQALKYFEKPPFHLWATA LSYTLFGIGDWQARLCVALSGAIGLLVSVLAAHRWFGARAAVLTGFVMVAAPMWNVAAHFNSLDMTLSGAMACVLAFMLL AQHPHATLAARRNWMLACWVAMGVAVLTKGLVGIALPGLVLVVYTLVTRDFGLWLRLHLVSGIVLMLVVTVPWFWLVSER NPEFLNFFFIHEHWQRYTSTVHSRKGPLWFFVPLLVAGFLPWLGAFPGMWQAVRERAGVERGSVARPFQPALLAAIWAIA IFVFFSLSGSKLPGYIVPIFPALGILAGVALDTATERSWRRQVNFMLVLGVLGLLATPYVATLDKPSTPNVVYREFALWV GLAFACMLAGALLARHLLRTRGVFASVVAYAVAMFLCATLAFRGHEAMGRPASGADLVPAINAVLTPDMPIYSVRLLDHT LPFYLRRTVILVEHPDELEFGVGQEPQKWIPTVDAFAERWRQGPHAIAMMSAETFADLTARGVPMFTIGQDKRRIVVANF PLPATARPQSSKD
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=382, Percent_Identity=28.7958115183246, Blast_Score=135, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 63352; Mature: 63352
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSSTSRYAGLSVGVIALISLGILLVWFGTLDMRHLLRSDEGRYAEIAREMFVTGDWVT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEE IRYQALKYFEKPPFHLWATALSYTLFGIGDWQARLCVALSGAIGLLVSVLAAHRWFGARA EHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH AVLTGFVMVAAPMWNVAAHFNSLDMTLSGAMACVLAFMLLAQHPHATLAARRNWMLACWV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHH AMGVAVLTKGLVGIALPGLVLVVYTLVTRDFGLWLRLHLVSGIVLMLVVTVPWFWLVSER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC NPEFLNFFFIHEHWQRYTSTVHSRKGPLWFFVPLLVAGFLPWLGAFPGMWQAVRERAGVE CCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC RGSVARPFQPALLAAIWAIAIFVFFSLSGSKLPGYIVPIFPALGILAGVALDTATERSWR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RQVNFMLVLGVLGLLATPYVATLDKPSTPNVVYREFALWVGLAFACMLAGALLARHLLRT HHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGVFASVVAYAVAMFLCATLAFRGHEAMGRPASGADLVPAINAVLTPDMPIYSVRLLDHT HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH LPFYLRRTVILVEHPDELEFGVGQEPQKWIPTVDAFAERWRQGPHAIAMMSAETFADLTA HHHHHCEEEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCEEEEECHHHHHHHHH RGVPMFTIGQDKRRIVVANFPLPATARPQSSKD CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MRSSSTSRYAGLSVGVIALISLGILLVWFGTLDMRHLLRSDEGRYAEIAREMFVTGDWVT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEE IRYQALKYFEKPPFHLWATALSYTLFGIGDWQARLCVALSGAIGLLVSVLAAHRWFGARA EHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH AVLTGFVMVAAPMWNVAAHFNSLDMTLSGAMACVLAFMLLAQHPHATLAARRNWMLACWV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHH AMGVAVLTKGLVGIALPGLVLVVYTLVTRDFGLWLRLHLVSGIVLMLVVTVPWFWLVSER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC NPEFLNFFFIHEHWQRYTSTVHSRKGPLWFFVPLLVAGFLPWLGAFPGMWQAVRERAGVE CCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC RGSVARPFQPALLAAIWAIAIFVFFSLSGSKLPGYIVPIFPALGILAGVALDTATERSWR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RQVNFMLVLGVLGLLATPYVATLDKPSTPNVVYREFALWVGLAFACMLAGALLARHLLRT HHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGVFASVVAYAVAMFLCATLAFRGHEAMGRPASGADLVPAINAVLTPDMPIYSVRLLDHT HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH LPFYLRRTVILVEHPDELEFGVGQEPQKWIPTVDAFAERWRQGPHAIAMMSAETFADLTA HHHHHCEEEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCEEEEECHHHHHHHHH RGVPMFTIGQDKRRIVVANFPLPATARPQSSKD CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA