Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is yfiQ [C]
Identifier: 73537717
GI number: 73537717
Start: 504490
End: 506583
Strand: Reverse
Name: yfiQ [C]
Synonym: Reut_B3883
Alternate gene names: 73537717
Gene position: 506583-504490 (Counterclockwise)
Preceding gene: 73537718
Following gene: 73537713
Centisome position: 18.58
GC content: 68.77
Gene sequence:
>2094_bases ATGACCGCCCCACTCCAGCCCCTGCTCTCCCCGCGCTCGATTGCCGTGATCGGTGCTTCCGACAACATCCACAAGATCGG CGGCCGGCCCATCCATTACATGAAGGCGCACGGCTATGCCGGCACGCTCTATCCTGTTAATCCGCAGCGCGACACCATCC AGGGGCTGCGCGCCTATCCCACGCTGGACGCGCTGCCGGAAGTGCCTGACCTGGCCATCATCATCGTGGCCGGCGAAGCT GCGGTGCAGGCCGTGCACGACTGTGCGCGGCTCGGCGTGGCGGCGGCTATCGTGATCGCCTCAGGCTTTGGTGAAGCGGG CGCCGAAGGCCGCCGCCAGCAGGACGAGATGGTGCGCGCCGCGCGCGCCACCGGCCTGCGGCTGGTTGGCCCGAACAGCC AGGGGCTGGCCAACTTCGGCAGCGGTGCGATCGCGAGTTTCTCCACGATGTTCATCGAGGTGCCACCCCAGGACGGACCG GTGGCAGTGGTCAGCCAGAGCGGCGGCGTGGCGGCAATGGTCTACGGGTTGCTGCGCGGACAGGGCATCGGCGTGCGCCA TATGCACGCCACGGGCAACCAGGCCGACATCACGGTCAGCGACTTGGCGCTGGCCGTCGCGCATGATCCCGGCGTGCGGC TGGTGCTGCTGTATCTGGAGAGCCTGTCCGATCCCGAGGTGCTGGCCGAAGCCGCACGCGTCGCACGTGCTCGCAATGTG CCGATCGTGGCCGTCAAGGCTGGCCGCTCGCAGGACGGGCAGCGCGCCGCGGCTTCGCACACCGGCGCCATCGCCAACGA AGACCGCGCTGTCGACGCGTTCCTGGCCCGCCATGGCATCTGGCGCGTCGACGATGCCCACGCGCTGGCACGCTGCGCGC CGATGTACCTGCGCGGCTGGAACGCCAGCGGGCGCCGGCTGGTGGTGGTAAGCAACTCGGGCGCCAGCTGCGTCATGGCG GCCGACGCGGCCCAGTCGTTCGGATTGACGCTTGCGCCGCTATCCGACGCCACCCAGGCAGCGCTCGCTGAACGCCTGCC AGGCTTTGCCGCAACGGCGAACCCGGTAGATGTCACGGCCGCGCTGCTCACCAACAGCGCGTTATTCGGCGAGGTGCTGC CCGTGGTCGGGCAGGATCCTTCCGCCGACTTGTTCCTGCTCGATATCCCAGTCTCCGGCATGGGCTACGACGTGCCGCGA TTTGCCCGCGACGCCGCCGCGTTTGCCGACACCGCGGGCAAGCCCATCGCCGTCGCCGTCTGGCAGCAGCCGGTGGCCGA CGCATTCCGTCAGGCCGGCGTGCCGACCTACGCCAATGCAGCCGAAGCGCTGTCCGCCTTCTCGCAGGTGGTCTCTCATC AGGAGCGCCTGCGGCAGATCGAAGCCGAAGGCGAGCCGCCGGTGCCGGCTCGCCCCGCGCTGCCGGTGACTGCAGGCGCG ACGCTAAGTGAAGCCGCCAGCCTTGGCCGTCTCGCGGCCGCCGGCATGCCGGTGGTCGAGCACTACGTGTGCCGCCACGT CGATGCAGCAGTCGCCGCATGGCAACGCATCGGCGCGCCAGTCGCAGTCAAGGCCAGCTCGCCACAGGTGCCGCACAAGA GCGAATACGGGCTGGTGGCTTTGAACTGCAACGATCCGGAATCGGTTGCCAGCGCCTTTGCTGCCCAGACCCGCACGCTG GAAAAGATGGGCGCGACGTGCGAAGGCGTCGTGGTCGCCCGCATGTCTCGCGCCCAGCGCGAATGCATGATCGGCGCGCA CTGGGATCCGGTGTTCGGCGCTGTACTGGTGGTCGGGGACGGGGGCAAGTATGTCGAGGTGCTGCGCGACACGGCTGTAC TGCTGGCGCCTTGTCGGGAGGCTGACGTAGCCCGCGCGCTGGAAGGACTCCGCATCGCGCCTTTGCTGTATGGCGTGCGC GGCGAACTGGCGGTGGATCTCGCGGCACTGTGCCGGCTGGCGGTTCAGGTCGGCGAGATGATGCACGCAGCCGGCGGCGA GATCCGGTCGATGGATCTCAATCCGGTGATGGTGAACGCCGGTGGTGTCGTGGTTGTGGATGCGCTGGTGGAGGTCGCAG GAGGTTCGCTTTAG
Upstream 100 bases:
>100_bases ATCGGGCAGGAAATCGACAAGTGGGCCAGGGTCGTCAAGACCTCTGGGGCCACCATCGACTGACCCACTCACCATCCGCC TACCCGATCAAGCCTTGCTC
Downstream 100 bases:
>100_bases ACAAAGCGCTGTCTCTGCGCTCGAGCCCCGGAATCGGGCCCTTGGTGGCTTCCTGTTTCTCCGCCAGGCGCCGCGCCGTG GCGGAGAAGCCGGCCGCCGA
Product: CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MTAPLQPLLSPRSIAVIGASDNIHKIGGRPIHYMKAHGYAGTLYPVNPQRDTIQGLRAYPTLDALPEVPDLAIIIVAGEA AVQAVHDCARLGVAAAIVIASGFGEAGAEGRRQQDEMVRAARATGLRLVGPNSQGLANFGSGAIASFSTMFIEVPPQDGP VAVVSQSGGVAAMVYGLLRGQGIGVRHMHATGNQADITVSDLALAVAHDPGVRLVLLYLESLSDPEVLAEAARVARARNV PIVAVKAGRSQDGQRAAASHTGAIANEDRAVDAFLARHGIWRVDDAHALARCAPMYLRGWNASGRRLVVVSNSGASCVMA ADAAQSFGLTLAPLSDATQAALAERLPGFAATANPVDVTAALLTNSALFGEVLPVVGQDPSADLFLLDIPVSGMGYDVPR FARDAAAFADTAGKPIAVAVWQQPVADAFRQAGVPTYANAAEALSAFSQVVSHQERLRQIEAEGEPPVPARPALPVTAGA TLSEAASLGRLAAAGMPVVEHYVCRHVDAAVAAWQRIGAPVAVKASSPQVPHKSEYGLVALNCNDPESVASAFAAQTRTL EKMGATCEGVVVARMSRAQRECMIGAHWDPVFGAVLVVGDGGKYVEVLRDTAVLLAPCREADVARALEGLRIAPLLYGVR GELAVDLAALCRLAVQVGEMMHAAGGEIRSMDLNPVMVNAGGVVVVDALVEVAGGSL
Sequences:
>Translated_697_residues MTAPLQPLLSPRSIAVIGASDNIHKIGGRPIHYMKAHGYAGTLYPVNPQRDTIQGLRAYPTLDALPEVPDLAIIIVAGEA AVQAVHDCARLGVAAAIVIASGFGEAGAEGRRQQDEMVRAARATGLRLVGPNSQGLANFGSGAIASFSTMFIEVPPQDGP VAVVSQSGGVAAMVYGLLRGQGIGVRHMHATGNQADITVSDLALAVAHDPGVRLVLLYLESLSDPEVLAEAARVARARNV PIVAVKAGRSQDGQRAAASHTGAIANEDRAVDAFLARHGIWRVDDAHALARCAPMYLRGWNASGRRLVVVSNSGASCVMA ADAAQSFGLTLAPLSDATQAALAERLPGFAATANPVDVTAALLTNSALFGEVLPVVGQDPSADLFLLDIPVSGMGYDVPR FARDAAAFADTAGKPIAVAVWQQPVADAFRQAGVPTYANAAEALSAFSQVVSHQERLRQIEAEGEPPVPARPALPVTAGA TLSEAASLGRLAAAGMPVVEHYVCRHVDAAVAAWQRIGAPVAVKASSPQVPHKSEYGLVALNCNDPESVASAFAAQTRTL EKMGATCEGVVVARMSRAQRECMIGAHWDPVFGAVLVVGDGGKYVEVLRDTAVLLAPCREADVARALEGLRIAPLLYGVR GELAVDLAALCRLAVQVGEMMHAAGGEIRSMDLNPVMVNAGGVVVVDALVEVAGGSL >Mature_696_residues TAPLQPLLSPRSIAVIGASDNIHKIGGRPIHYMKAHGYAGTLYPVNPQRDTIQGLRAYPTLDALPEVPDLAIIIVAGEAA VQAVHDCARLGVAAAIVIASGFGEAGAEGRRQQDEMVRAARATGLRLVGPNSQGLANFGSGAIASFSTMFIEVPPQDGPV AVVSQSGGVAAMVYGLLRGQGIGVRHMHATGNQADITVSDLALAVAHDPGVRLVLLYLESLSDPEVLAEAARVARARNVP IVAVKAGRSQDGQRAAASHTGAIANEDRAVDAFLARHGIWRVDDAHALARCAPMYLRGWNASGRRLVVVSNSGASCVMAA DAAQSFGLTLAPLSDATQAALAERLPGFAATANPVDVTAALLTNSALFGEVLPVVGQDPSADLFLLDIPVSGMGYDVPRF ARDAAAFADTAGKPIAVAVWQQPVADAFRQAGVPTYANAAEALSAFSQVVSHQERLRQIEAEGEPPVPARPALPVTAGAT LSEAASLGRLAAAGMPVVEHYVCRHVDAAVAAWQRIGAPVAVKASSPQVPHKSEYGLVALNCNDPESVASAFAAQTRTLE KMGATCEGVVVARMSRAQRECMIGAHWDPVFGAVLVVGDGGKYVEVLRDTAVLLAPCREADVARALEGLRIAPLLYGVRG ELAVDLAALCRLAVQVGEMMHAAGGEIRSMDLNPVMVNAGGVVVVDALVEVAGGSL
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=737, Percent_Identity=28.629579375848, Blast_Score=216, Evalue=4e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 72110; Mature: 71979
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPLQPLLSPRSIAVIGASDNIHKIGGRPIHYMKAHGYAGTLYPVNPQRDTIQGLRAYP CCCCCCCCCCCCCEEEEECCCCEECCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHCCC TLDALPEVPDLAIIIVAGEAAVQAVHDCARLGVAAAIVIASGFGEAGAEGRRQQDEMVRA CHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH ARATGLRLVGPNSQGLANFGSGAIASFSTMFIEVPPQDGPVAVVSQSGGVAAMVYGLLRG HHHCCEEEECCCCCCCCCCCCCHHEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHC QGIGVRHMHATGNQADITVSDLALAVAHDPGVRLVLLYLESLSDPEVLAEAARVARARNV CCCCEEEEECCCCCCEEEHHHEEEEEECCCCCEEEEEEHHHCCCHHHHHHHHHHHHHCCC PIVAVKAGRSQDGQRAAASHTGAIANEDRAVDAFLARHGIWRVDDAHALARCAPMYLRGW CEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHEECC NASGRRLVVVSNSGASCVMAADAAQSFGLTLAPLSDATQAALAERLPGFAATANPVDVTA CCCCCEEEEEECCCCCEEEEECCHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHH ALLTNSALFGEVLPVVGQDPSADLFLLDIPVSGMGYDVPRFARDAAAFADTAGKPIAVAV HHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE WQQPVADAFRQAGVPTYANAAEALSAFSQVVSHQERLRQIEAEGEPPVPARPALPVTAGA CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCC TLSEAASLGRLAAAGMPVVEHYVCRHVDAAVAAWQRIGAPVAVKASSPQVPHKSEYGLVA CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEE LNCNDPESVASAFAAQTRTLEKMGATCEGVVVARMSRAQRECMIGAHWDPVFGAVLVVGD EECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEC GGKYVEVLRDTAVLLAPCREADVARALEGLRIAPLLYGVRGELAVDLAALCRLAVQVGEM CCHHHHHHHHHHHEEECCCHHHHHHHHCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHH MHAAGGEIRSMDLNPVMVNAGGVVVVDALVEVAGGSL HHHCCCCEEEECCCEEEECCCCEEEHHHHHHHCCCCC >Mature Secondary Structure TAPLQPLLSPRSIAVIGASDNIHKIGGRPIHYMKAHGYAGTLYPVNPQRDTIQGLRAYP CCCCCCCCCCCCEEEEECCCCEECCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHCCC TLDALPEVPDLAIIIVAGEAAVQAVHDCARLGVAAAIVIASGFGEAGAEGRRQQDEMVRA CHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH ARATGLRLVGPNSQGLANFGSGAIASFSTMFIEVPPQDGPVAVVSQSGGVAAMVYGLLRG HHHCCEEEECCCCCCCCCCCCCHHEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHC QGIGVRHMHATGNQADITVSDLALAVAHDPGVRLVLLYLESLSDPEVLAEAARVARARNV CCCCEEEEECCCCCCEEEHHHEEEEEECCCCCEEEEEEHHHCCCHHHHHHHHHHHHHCCC PIVAVKAGRSQDGQRAAASHTGAIANEDRAVDAFLARHGIWRVDDAHALARCAPMYLRGW CEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHEECC NASGRRLVVVSNSGASCVMAADAAQSFGLTLAPLSDATQAALAERLPGFAATANPVDVTA CCCCCEEEEEECCCCCEEEEECCHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHH ALLTNSALFGEVLPVVGQDPSADLFLLDIPVSGMGYDVPRFARDAAAFADTAGKPIAVAV HHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE WQQPVADAFRQAGVPTYANAAEALSAFSQVVSHQERLRQIEAEGEPPVPARPALPVTAGA CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCC TLSEAASLGRLAAAGMPVVEHYVCRHVDAAVAAWQRIGAPVAVKASSPQVPHKSEYGLVA CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEE LNCNDPESVASAFAAQTRTLEKMGATCEGVVVARMSRAQRECMIGAHWDPVFGAVLVVGD EECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEC GGKYVEVLRDTAVLLAPCREADVARALEGLRIAPLLYGVRGELAVDLAALCRLAVQVGEM CCHHHHHHHHHHHEEECCCHHHHHHHHCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHH MHAAGGEIRSMDLNPVMVNAGGVVVVDALVEVAGGSL HHHCCCCEEEECCCEEEECCCCEEEHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]