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The map label for this gene is yjgH [H]

Identifier: 73537653

GI number: 73537653

Start: 423583

End: 423990

Strand: Reverse

Name: yjgH [H]

Synonym: Reut_B3818

Alternate gene names: 73537653

Gene position: 423990-423583 (Counterclockwise)

Preceding gene: 73537654

Following gene: 73537652

Centisome position: 15.55

GC content: 58.58

Gene sequence:

>408_bases
ATGACAGACCGAGAATTGATCGTCCCGCGAGCGATGCAACGTATCGTAGACCGTGCCGGCTATATACCCGCGATAAGGCT
TGGCGCCACCGTTTTCTGCGCTGGACAGGTGGGGCGTACCGTTGACCTTGCAGTGATCTCGGATCCCGAAGCGCAGTTCC
TGGCGTGCTGGGAGAACCTGCGCGTGGTGTTGGAGGCGGCAGGGTGTACTTTCGAGGACGTTGTCGATATGACGACGTAC
CACGTGGACATGGCTAAGCATATGCCCATATTCCGGGCAGTGAAGAATCGGATCTTTCCACACGGCACTTGCGCATGGAC
GTCAATAGGGGTTTCCGAACTCGCACACCCAGGCCTGCTGGTCGAGATCAAGTGCGTCGCAGCGAAGAGCCAGCCCGAGA
CCGAGTGA

Upstream 100 bases:

>100_bases
CATTGACCACGCCAAAATTTCACTGGACTAAATCACTGCATTGACGAGGCATGCAATCCTGGCCTGAAGGCCGAGCGTTC
CCGCACTTCCTGATGAACAA

Downstream 100 bases:

>100_bases
CGGTGGAGCTTATCATGTCTCCGGCAGCGCCGGCCGAAGCTCGCCGGTAATTGTGTTCATGATAATGGACATGCTCGCTG
GTTGCGGCGATTCCCAATGG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTDRELIVPRAMQRIVDRAGYIPAIRLGATVFCAGQVGRTVDLAVISDPEAQFLACWENLRVVLEAAGCTFEDVVDMTTY
HVDMAKHMPIFRAVKNRIFPHGTCAWTSIGVSELAHPGLLVEIKCVAAKSQPETE

Sequences:

>Translated_135_residues
MTDRELIVPRAMQRIVDRAGYIPAIRLGATVFCAGQVGRTVDLAVISDPEAQFLACWENLRVVLEAAGCTFEDVVDMTTY
HVDMAKHMPIFRAVKNRIFPHGTCAWTSIGVSELAHPGLLVEIKCVAAKSQPETE
>Mature_134_residues
TDRELIVPRAMQRIVDRAGYIPAIRLGATVFCAGQVGRTVDLAVISDPEAQFLACWENLRVVLEAAGCTFEDVVDMTTYH
VDMAKHMPIFRAVKNRIFPHGTCAWTSIGVSELAHPGLLVEIKCVAAKSQPETE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=130, Percent_Identity=36.1538461538462, Blast_Score=80, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14855; Mature: 14724

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRELIVPRAMQRIVDRAGYIPAIRLGATVFCAGQVGRTVDLAVISDPEAQFLACWENL
CCCCHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHH
RVVLEAAGCTFEDVVDMTTYHVDMAKHMPIFRAVKNRIFPHGTCAWTSIGVSELAHPGLL
HHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCEE
VEIKCVAAKSQPETE
EEEEEEEECCCCCCC
>Mature Secondary Structure 
TDRELIVPRAMQRIVDRAGYIPAIRLGATVFCAGQVGRTVDLAVISDPEAQFLACWENL
CCCHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHH
RVVLEAAGCTFEDVVDMTTYHVDMAKHMPIFRAVKNRIFPHGTCAWTSIGVSELAHPGLL
HHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCEE
VEIKCVAAKSQPETE
EEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]