Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is cutS [H]
Identifier: 73537627
GI number: 73537627
Start: 394737
End: 395909
Strand: Direct
Name: cutS [H]
Synonym: Reut_B3792
Alternate gene names: 73537627
Gene position: 394737-395909 (Clockwise)
Preceding gene: 73537626
Following gene: 73537635
Centisome position: 14.48
GC content: 66.58
Gene sequence:
>1173_bases GTGCAAACCATCGCATTCACCGTCAATGGCCGGCAGGTATCCGGCGCGTGCACGGACCGTACGCATCTCGGCGACTTCCT GCGCGACACGCATCGCCTGACGGGCACCCACCTCGGCTGCGAGCACGGCGTCTGCGGCGCCTGCACGGTGCTGGTCGACG ACAAGCCCGTGCGCTCATGCATTACCTTCGCCGCCGGTTGCGCGGGCGCCGATATCGTCACCGTCGAGGGGTACGAGGAC GATGCCGTCATGGCCGACCTGCGCGCGGCGTTCAATCGTCATCATGCGTTGCAGTGCGGCTTCTGTACGCCGGGCATGCT CGCCACCGCGCGCGATATCGTGCTGCGCTTGCCCGATGCGGACGAGGCCACGATCCGCCATGAACTGTCGGGCAACCTGT GCCGCTGTACGGGCTACATGGGCATTGTCGCGGCTATCCGTTCGGTGCTTGATGCGCGCCGGGCGGCATCGGGCGCAACG GTGCCAGGGGCGCCTTTGGCCGCTGCTACGAAGAAGTTCACCGGCTTTACCGTCTCCGACGAGGCATTGGGCGCTGCGCC AGTACAGGCCGCCACGGCAGCCAATGAAGCGGGGCGCGCCGCGGACCGCAAGGGCTGGTCCCGCATCGAAGGCAGCTTCG CCGTGCCCTATCCGGTCGACGCCGTATGGGCATTCATGGCCGACCTGCCGGCCGTTGCAGGCTGCCTGCCGGGCGCGGTA CTGACCGAAATCGAGGGCGAGAAGGTCAAGGGACACATCGCGATCAAGTTCGGCCCCATGTCCGCGCGGTTCGAAGGTGC GGCACGCCTGCAGCGCGATGACAGCCGCATGCGTGGTGTGCTCAAAGGCGCAGGGCAGGATTCGCTGAGCAACTCCAAGG CCGCCGGCGATATTGCCTACCAGCTCACCGCACGCTCGGCCAGCGAGACGGAAGTCGAAGTGGACCTCCAGTATTCGCTG CAAGGCCCGCTCGCCCAGTTCTCTCGTTCCGGACTCGTGCGCGATTTCGTGCGGCGCATGATCGCCGACTTCGGCAAGTC GGTCGCGCGCAGGATGGATCCCACGCTGAGCGAAGCCGAGCGGATGAAGACAGCGCAGCTCAATCCCGTCGCGCTGTTCT TTGGCGTGTTGTGGGAACGCGTGAAACGGGTGTTCGGCGCAGGCGGGCGCTGA
Upstream 100 bases:
>100_bases CCATTGCCGTCGCCGCGCCGGACAAGGACGCCATCGACCGCAAGCTGTGCCGCACCGTTGTCACGCGCTGCGTGATGCAA ATGCTGAACTGAGGAGCCCT
Downstream 100 bases:
>100_bases TGCGCAGGCCCGCCTGGCGTTAAGTTGGCACTACGCCGGCGCGGGCTTGCGCACCTGCGCGCCGATCTGCCGCCGCATTT CATCGGCGAGCGGATGCAGG
Product: ferredoxin
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MQTIAFTVNGRQVSGACTDRTHLGDFLRDTHRLTGTHLGCEHGVCGACTVLVDDKPVRSCITFAAGCAGADIVTVEGYED DAVMADLRAAFNRHHALQCGFCTPGMLATARDIVLRLPDADEATIRHELSGNLCRCTGYMGIVAAIRSVLDARRAASGAT VPGAPLAAATKKFTGFTVSDEALGAAPVQAATAANEAGRAADRKGWSRIEGSFAVPYPVDAVWAFMADLPAVAGCLPGAV LTEIEGEKVKGHIAIKFGPMSARFEGAARLQRDDSRMRGVLKGAGQDSLSNSKAAGDIAYQLTARSASETEVEVDLQYSL QGPLAQFSRSGLVRDFVRRMIADFGKSVARRMDPTLSEAERMKTAQLNPVALFFGVLWERVKRVFGAGGR
Sequences:
>Translated_390_residues MQTIAFTVNGRQVSGACTDRTHLGDFLRDTHRLTGTHLGCEHGVCGACTVLVDDKPVRSCITFAAGCAGADIVTVEGYED DAVMADLRAAFNRHHALQCGFCTPGMLATARDIVLRLPDADEATIRHELSGNLCRCTGYMGIVAAIRSVLDARRAASGAT VPGAPLAAATKKFTGFTVSDEALGAAPVQAATAANEAGRAADRKGWSRIEGSFAVPYPVDAVWAFMADLPAVAGCLPGAV LTEIEGEKVKGHIAIKFGPMSARFEGAARLQRDDSRMRGVLKGAGQDSLSNSKAAGDIAYQLTARSASETEVEVDLQYSL QGPLAQFSRSGLVRDFVRRMIADFGKSVARRMDPTLSEAERMKTAQLNPVALFFGVLWERVKRVFGAGGR >Mature_390_residues MQTIAFTVNGRQVSGACTDRTHLGDFLRDTHRLTGTHLGCEHGVCGACTVLVDDKPVRSCITFAAGCAGADIVTVEGYED DAVMADLRAAFNRHHALQCGFCTPGMLATARDIVLRLPDADEATIRHELSGNLCRCTGYMGIVAAIRSVLDARRAASGAT VPGAPLAAATKKFTGFTVSDEALGAAPVQAATAANEAGRAADRKGWSRIEGSFAVPYPVDAVWAFMADLPAVAGCLPGAV LTEIEGEKVKGHIAIKFGPMSARFEGAARLQRDDSRMRGVLKGAGQDSLSNSKAAGDIAYQLTARSASETEVEVDLQYSL QGPLAQFSRSGLVRDFVRRMIADFGKSVARRMDPTLSEAERMKTAQLNPVALFFGVLWERVKRVFGAGGR
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=157, Percent_Identity=35.031847133758, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1786480, Length=159, Percent_Identity=37.7358490566038, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1789232, Length=159, Percent_Identity=39.622641509434, Blast_Score=97, Evalue=2e-21, Organism=Caenorhabditis elegans, GI32566215, Length=156, Percent_Identity=36.5384615384615, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17540638, Length=157, Percent_Identity=35.031847133758, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17539860, Length=156, Percent_Identity=35.2564102564103, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI17737937, Length=160, Percent_Identity=34.375, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647199, Length=161, Percent_Identity=31.6770186335404, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24647201, Length=155, Percent_Identity=30.3225806451613, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24647197, Length=161, Percent_Identity=29.1925465838509, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24647195, Length=161, Percent_Identity=29.1925465838509, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24647193, Length=138, Percent_Identity=29.7101449275362, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 41383; Mature: 41383
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIAFTVNGRQVSGACTDRTHLGDFLRDTHRLTGTHLGCEHGVCGACTVLVDDKPVRSC CCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHH ITFAAGCAGADIVTVEGYEDDAVMADLRAAFNRHHALQCGFCTPGMLATARDIVLRLPDA HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHEEECCCC DEATIRHELSGNLCRCTGYMGIVAAIRSVLDARRAASGATVPGAPLAAATKKFTGFTVSD CCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEECC EALGAAPVQAATAANEAGRAADRKGWSRIEGSFAVPYPVDAVWAFMADLPAVAGCLPGAV HHCCCCCHHHHHHHHHHCCHHHHCCHHHCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHH LTEIEGEKVKGHIAIKFGPMSARFEGAARLQRDDSRMRGVLKGAGQDSLSNSKAAGDIAY HHCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE QLTARSASETEVEVDLQYSLQGPLAQFSRSGLVRDFVRRMIADFGKSVARRMDPTLSEAE EEEECCCCCCEEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RMKTAQLNPVALFFGVLWERVKRVFGAGGR HHHHCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQTIAFTVNGRQVSGACTDRTHLGDFLRDTHRLTGTHLGCEHGVCGACTVLVDDKPVRSC CCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHH ITFAAGCAGADIVTVEGYEDDAVMADLRAAFNRHHALQCGFCTPGMLATARDIVLRLPDA HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHEEECCCC DEATIRHELSGNLCRCTGYMGIVAAIRSVLDARRAASGATVPGAPLAAATKKFTGFTVSD CCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEECC EALGAAPVQAATAANEAGRAADRKGWSRIEGSFAVPYPVDAVWAFMADLPAVAGCLPGAV HHCCCCCHHHHHHHHHHCCHHHHCCHHHCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHH LTEIEGEKVKGHIAIKFGPMSARFEGAARLQRDDSRMRGVLKGAGQDSLSNSKAAGDIAY HHCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE QLTARSASETEVEVDLQYSLQGPLAQFSRSGLVRDFVRRMIADFGKSVARRMDPTLSEAE EEEECCCCCCEEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RMKTAQLNPVALFFGVLWERVKRVFGAGGR HHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]