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The map label for this gene is ycgB [H]

Identifier: 73537390

GI number: 73537390

Start: 107628

End: 109181

Strand: Direct

Name: ycgB [H]

Synonym: Reut_B3555

Alternate gene names: 73537390

Gene position: 107628-109181 (Clockwise)

Preceding gene: 73537389

Following gene: 73537396

Centisome position: 3.95

GC content: 61.52

Gene sequence:

>1554_bases
ATGGCTTATCTCTCCACGGGTTCGGAATGGACCTTCGAGCTGATCAACCGGTATGACCGCGAGATCGCCCGTATTGCCGG
CGAATTCGGCCTGGACACCTATCCCAACCAGATCGAGATCATCACCGCCGAGCAGATGCTGGATGCCTATGCATCGGCCG
GCCTTCCGGTGGGATACAGCCACTGGTCATACGGCAAGCACTTCCTGGCCTCGGAACGCAGCTACCAGCGCGGCCACATG
GGGCTGGCCTACGAGATCGTAATCAACTCCAACCCCTGCATCGCCTACCTGATGGAGGAAAACACGCTGCCCATGCAGGC
GCTCACCATCGCGCATGCGTGCTACGGCCATAACTCCTTCTTCAAGGGCAACTACCTGTTCCGCGCCTGGACCAACGCGG
ACGCCATCATTGATTACTTGCTGTTCGCCAAGAACTACGTGGCCGAATGCGAGCAGCGCTATGGCGAGCAAGAGGTGGAA
CTCCTGCTCGACTCCTGTCACGCACTGCAAAACTATGGCGTAGACCGCTACAAGCGACCCAAGAAGTTGTCGATCACCGA
AGAGCAGGCACGTCAGACCGAGCGCGAGAACTACCTGCAGATGCAGGTCAACGATTTGTGGCGCACGCTGCCCAAGCACC
GCTCGCACGCGCTTGCGGCGGATGACGACGCGGTCGAGCCGGAAGGCACCTTCCCGCCGGAGCCCCAGGAGAACCTGCTC
TACTTCATCGAGAAGAACGCGCCCAAGCTCGCGCCGTGGCAGCGCGAGATCGTGCGCATCGTGCGTAAGATCGCGCAGTA
CTTCTACCCGCAGCGCCAGACCAAGGTGATGAACGAAGGCTGGGCCACGTTCTGGCACTACACGATCATCCACCAGCTCT
ACGAGGAAAAGCTGGTCAACGACGCGTTCATGCTGGAATTGCTGCAGGCGCACACCAATGTGATCTACCAGCCGCCGTAC
CACAGCCCATACTACAGTGGCCTGAACCCGTACACGCTGGGCTTCCTGATGTTCCAGGACCTGCGCCGCATGTGCGAGAA
CCCGGACGACGAGGACCGCTACTGGGCGCCGGAGATCGCCGGCTCGGACTGGCGTACCACGCTCGACTTCGCCATGCGCA
ACTTCAAGGACGAGAGCTTCCTGCTCCAGTTCCTGTCGCCGCGCGTCATTCGCGAACTCAAGCTGTTCTCGGTGCTCGAC
GACGACCGCGAGAACAAGCTGCGCGTGACGGCCATCCATAACGATGAGGGCTATCGCATGATCCGGCAGCTGCTGGCCTC
GCAGTACGACTTGTCCGGCATGGAGCCGAATATCCAGGTCACCAATGTCGATGTGGGTGGGGACCGCTCGCTGACCTTGC
GTCACCAGCAAAGCGACCGCCGGCCGCTTTCGCACAACTTCGACGAGGTGATCCGCCACGTGACGCGCCTGTGGGGCTTC
AACGTGCGGCTGGAAGTGGCGTATGAGGATGGCCGGCGCGAACTCAAGTACGAGTGCAAGCCGGAACGCCGCCACCGCAA
GGTGCCCGGTGGCGGGCTGAGCCTGGCGGCCTGA

Upstream 100 bases:

>100_bases
TGGACCAGCAGGACGTTGACAGTGGCAACGCGGCGCAGCGTCGCCGTCCCGGGCAACGTATGCCGGGAGCGGCCCGCTTG
CCCGCCAGATGGGGGTGAAG

Downstream 100 bases:

>100_bases
GCCTGAGAGTTTTCCGTGTACGAAACGGCGGCCCTAACCGGGCCGCCGTTTCGTTTCGGATGTCAGCCAGCGGTCTCGCA
CCAGTCTCGCACCAGTTCCA

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MAYLSTGSEWTFELINRYDREIARIAGEFGLDTYPNQIEIITAEQMLDAYASAGLPVGYSHWSYGKHFLASERSYQRGHM
GLAYEIVINSNPCIAYLMEENTLPMQALTIAHACYGHNSFFKGNYLFRAWTNADAIIDYLLFAKNYVAECEQRYGEQEVE
LLLDSCHALQNYGVDRYKRPKKLSITEEQARQTERENYLQMQVNDLWRTLPKHRSHALAADDDAVEPEGTFPPEPQENLL
YFIEKNAPKLAPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTIIHQLYEEKLVNDAFMLELLQAHTNVIYQPPY
HSPYYSGLNPYTLGFLMFQDLRRMCENPDDEDRYWAPEIAGSDWRTTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLD
DDRENKLRVTAIHNDEGYRMIRQLLASQYDLSGMEPNIQVTNVDVGGDRSLTLRHQQSDRRPLSHNFDEVIRHVTRLWGF
NVRLEVAYEDGRRELKYECKPERRHRKVPGGGLSLAA

Sequences:

>Translated_517_residues
MAYLSTGSEWTFELINRYDREIARIAGEFGLDTYPNQIEIITAEQMLDAYASAGLPVGYSHWSYGKHFLASERSYQRGHM
GLAYEIVINSNPCIAYLMEENTLPMQALTIAHACYGHNSFFKGNYLFRAWTNADAIIDYLLFAKNYVAECEQRYGEQEVE
LLLDSCHALQNYGVDRYKRPKKLSITEEQARQTERENYLQMQVNDLWRTLPKHRSHALAADDDAVEPEGTFPPEPQENLL
YFIEKNAPKLAPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTIIHQLYEEKLVNDAFMLELLQAHTNVIYQPPY
HSPYYSGLNPYTLGFLMFQDLRRMCENPDDEDRYWAPEIAGSDWRTTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLD
DDRENKLRVTAIHNDEGYRMIRQLLASQYDLSGMEPNIQVTNVDVGGDRSLTLRHQQSDRRPLSHNFDEVIRHVTRLWGF
NVRLEVAYEDGRRELKYECKPERRHRKVPGGGLSLAA
>Mature_516_residues
AYLSTGSEWTFELINRYDREIARIAGEFGLDTYPNQIEIITAEQMLDAYASAGLPVGYSHWSYGKHFLASERSYQRGHMG
LAYEIVINSNPCIAYLMEENTLPMQALTIAHACYGHNSFFKGNYLFRAWTNADAIIDYLLFAKNYVAECEQRYGEQEVEL
LLDSCHALQNYGVDRYKRPKKLSITEEQARQTERENYLQMQVNDLWRTLPKHRSHALAADDDAVEPEGTFPPEPQENLLY
FIEKNAPKLAPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTIIHQLYEEKLVNDAFMLELLQAHTNVIYQPPYH
SPYYSGLNPYTLGFLMFQDLRRMCENPDDEDRYWAPEIAGSDWRTTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLDD
DRENKLRVTAIHNDEGYRMIRQLLASQYDLSGMEPNIQVTNVDVGGDRSLTLRHQQSDRRPLSHNFDEVIRHVTRLWGFN
VRLEVAYEDGRRELKYECKPERRHRKVPGGGLSLAA

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=498, Percent_Identity=64.4578313253012, Blast_Score=699, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60640; Mature: 60509

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYLSTGSEWTFELINRYDREIARIAGEFGLDTYPNQIEIITAEQMLDAYASAGLPVGYS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCC
HWSYGKHFLASERSYQRGHMGLAYEIVINSNPCIAYLMEENTLPMQALTIAHACYGHNSF
CCHHCHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE
FKGNYLFRAWTNADAIIDYLLFAKNYVAECEQRYGEQEVELLLDSCHALQNYGVDRYKRP
ECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHCCC
KKLSITEEQARQTERENYLQMQVNDLWRTLPKHRSHALAADDDAVEPEGTFPPEPQENLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
YFIEKNAPKLAPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTIIHQLYEEKLVN
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DAFMLELLQAHTNVIYQPPYHSPYYSGLNPYTLGFLMFQDLRRMCENPDDEDRYWAPEIA
HHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
GSDWRTTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLDDDRENKLRVTAIHNDEGYRM
CCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHH
IRQLLASQYDLSGMEPNIQVTNVDVGGDRSLTLRHQQSDRRPLSHNFDEVIRHVTRLWGF
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
NVRLEVAYEDGRRELKYECKPERRHRKVPGGGLSLAA
CEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AYLSTGSEWTFELINRYDREIARIAGEFGLDTYPNQIEIITAEQMLDAYASAGLPVGYS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCC
HWSYGKHFLASERSYQRGHMGLAYEIVINSNPCIAYLMEENTLPMQALTIAHACYGHNSF
CCHHCHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE
FKGNYLFRAWTNADAIIDYLLFAKNYVAECEQRYGEQEVELLLDSCHALQNYGVDRYKRP
ECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHCCC
KKLSITEEQARQTERENYLQMQVNDLWRTLPKHRSHALAADDDAVEPEGTFPPEPQENLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
YFIEKNAPKLAPWQREIVRIVRKIAQYFYPQRQTKVMNEGWATFWHYTIIHQLYEEKLVN
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DAFMLELLQAHTNVIYQPPYHSPYYSGLNPYTLGFLMFQDLRRMCENPDDEDRYWAPEIA
HHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
GSDWRTTLDFAMRNFKDESFLLQFLSPRVIRELKLFSVLDDDRENKLRVTAIHNDEGYRM
CCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHH
IRQLLASQYDLSGMEPNIQVTNVDVGGDRSLTLRHQQSDRRPLSHNFDEVIRHVTRLWGF
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
NVRLEVAYEDGRRELKYECKPERRHRKVPGGGLSLAA
CEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]