| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is fabG [C]
Identifier: 73537380
GI number: 73537380
Start: 94195
End: 95109
Strand: Direct
Name: fabG [C]
Synonym: Reut_B3545
Alternate gene names: 73537380
Gene position: 94195-95109 (Clockwise)
Preceding gene: 73537378
Following gene: 73537381
Centisome position: 3.46
GC content: 64.7
Gene sequence:
>915_bases ATGAGCGGTTTGATGGCAGGCAAGGTAGCGCTGGTAACGGGCGCGGGTGGTGGAATCGGGCGCGGTATCGCGCTGGCGAT GGCAGCTGCCGGCGCCAAGGTCGTGGTCAACGACCTTGGCGTGTCGATGACCGGCGAAGGTGGCGATGCCGGTCCCGCAC AGCGCGTGGTGGAAGAAATCCGCGCGGCCGGCGGCGAGGCCGTGGCGAACACCGACAGCGTGTCGACCTGGAACGGTGCT AACGCCATCGTCCAGTGCGCGCTCGACAACTTCGGCCGCATCGATGCCGTGGTCAACAACGCCGGCAACCTGCGCGACCG CATGTTCTTCAAGATGAATGAAGAGGAATGGCGTTCGGTTATCGACGTGCACCTGCACGGCACCTTCTTCGTGAGCCGCG CCGCAGCCAACTATTTCAAGGACCAGGAAGGCGGCGCCTTCGTGCACATGACGTCGACTTCGGGCCTGATCGGCAATCTG GGCCAGGCCAACTACTCGGCCGCCAAGCTCGGCATCGCCGCGCTGTCGAAGTCGATCGCACTCGACATGCAGCGCTTCAA CGTGCGCTCGAACTGCATCGCGCCGTTCGCATGGAGCCGCATGACCAGCTCGATCCCGGCCGAGACGCCGGAAGAGAAGG CACGCGTGGCCAAGCTGCAGAAGATGGAAGCCGGCAAGATCGGCCCTGTGGCCGTCTACCTGGCCAGCCCGTCCGCAGCC GAGGTCAACGGTCAGATCTTCGCCGTGCGCGCCAACGAAATCATCCTGATGAGCCAGCCGCGCCCGGTGCGCTCGGTGCA CATGAGCGAAGGCTGGACGCCGGAATCGATTGGCGAGATCGCCATGCCGGCCATGCGCAACAGCTTCTTCAAGCTCGAGC GCTCGCCCGACGTGATCAGCTGGGATCCGATCTGA
Upstream 100 bases:
>100_bases GACATGCTTGCCTGCGACTGGCACGGCCGTCGCGGGCAGCCGTTATTGTCGCCAGAAACGCGGTCTGTTGACCGGGAAAA GCATTCAGAGGAGCAACGCA
Downstream 100 bases:
>100_bases GATGGCGCCCGCCATGCAGGGCGCACTGGCCGGTGTCCGGGTGCTCGACCTGTCGCGCATCCTGGCCGGGCCGTGGTGCG CGCAGAACCTGGCGGATCTC
Product: Short-chain dehydrogenase/reductase SDR
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSGLMAGKVALVTGAGGGIGRGIALAMAAAGAKVVVNDLGVSMTGEGGDAGPAQRVVEEIRAAGGEAVANTDSVSTWNGA NAIVQCALDNFGRIDAVVNNAGNLRDRMFFKMNEEEWRSVIDVHLHGTFFVSRAAANYFKDQEGGAFVHMTSTSGLIGNL GQANYSAAKLGIAALSKSIALDMQRFNVRSNCIAPFAWSRMTSSIPAETPEEKARVAKLQKMEAGKIGPVAVYLASPSAA EVNGQIFAVRANEIILMSQPRPVRSVHMSEGWTPESIGEIAMPAMRNSFFKLERSPDVISWDPI
Sequences:
>Translated_304_residues MSGLMAGKVALVTGAGGGIGRGIALAMAAAGAKVVVNDLGVSMTGEGGDAGPAQRVVEEIRAAGGEAVANTDSVSTWNGA NAIVQCALDNFGRIDAVVNNAGNLRDRMFFKMNEEEWRSVIDVHLHGTFFVSRAAANYFKDQEGGAFVHMTSTSGLIGNL GQANYSAAKLGIAALSKSIALDMQRFNVRSNCIAPFAWSRMTSSIPAETPEEKARVAKLQKMEAGKIGPVAVYLASPSAA EVNGQIFAVRANEIILMSQPRPVRSVHMSEGWTPESIGEIAMPAMRNSFFKLERSPDVISWDPI >Mature_303_residues SGLMAGKVALVTGAGGGIGRGIALAMAAAGAKVVVNDLGVSMTGEGGDAGPAQRVVEEIRAAGGEAVANTDSVSTWNGAN AIVQCALDNFGRIDAVVNNAGNLRDRMFFKMNEEEWRSVIDVHLHGTFFVSRAAANYFKDQEGGAFVHMTSTSGLIGNLG QANYSAAKLGIAALSKSIALDMQRFNVRSNCIAPFAWSRMTSSIPAETPEEKARVAKLQKMEAGKIGPVAVYLASPSAAE VNGQIFAVRANEIILMSQPRPVRSVHMSEGWTPESIGEIAMPAMRNSFFKLERSPDVISWDPI
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4504505, Length=273, Percent_Identity=44.3223443223443, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=30.3643724696356, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI19923817, Length=261, Percent_Identity=26.8199233716475, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI40254992, Length=202, Percent_Identity=30.1980198019802, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI59889578, Length=175, Percent_Identity=29.1428571428571, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI32483357, Length=260, Percent_Identity=26.5384615384615, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI31542939, Length=208, Percent_Identity=31.25, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=28.2352941176471, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI4758504, Length=215, Percent_Identity=30.6976744186047, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI224922801, Length=183, Percent_Identity=30.6010928961749, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI209862901, Length=266, Percent_Identity=25.5639097744361, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI19923983, Length=266, Percent_Identity=25.5639097744361, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI83715985, Length=191, Percent_Identity=31.413612565445, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=34.2629482071713, Blast_Score=117, Evalue=8e-28, Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=29.9212598425197, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=30.6451612903226, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=29.2490118577075, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI87082160, Length=257, Percent_Identity=27.2373540856031, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=28.4584980237154, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1788459, Length=260, Percent_Identity=27.6923076923077, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1786812, Length=191, Percent_Identity=30.3664921465969, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=28.9795918367347, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787526, Length=258, Percent_Identity=25.1937984496124, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789378, Length=266, Percent_Identity=25.5639097744361, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1789057, Length=267, Percent_Identity=24.7191011235955, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17568967, Length=247, Percent_Identity=42.5101214574899, Blast_Score=190, Evalue=7e-49, Organism=Caenorhabditis elegans, GI25147288, Length=258, Percent_Identity=33.7209302325581, Blast_Score=114, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17555706, Length=254, Percent_Identity=29.1338582677165, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560676, Length=255, Percent_Identity=27.4509803921569, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17564282, Length=219, Percent_Identity=26.027397260274, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17538182, Length=213, Percent_Identity=33.8028169014084, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193203117, Length=193, Percent_Identity=25.3886010362694, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=24.2063492063492, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193203115, Length=191, Percent_Identity=25.6544502617801, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17544670, Length=198, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71997099, Length=204, Percent_Identity=28.4313725490196, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17559104, Length=199, Percent_Identity=28.643216080402, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI72000259, Length=201, Percent_Identity=29.8507462686567, Blast_Score=68, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71994600, Length=189, Percent_Identity=27.5132275132275, Blast_Score=68, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17562906, Length=202, Percent_Identity=27.2277227722772, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17531453, Length=200, Percent_Identity=27, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=25, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17562908, Length=198, Percent_Identity=25.2525252525253, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193204405, Length=201, Percent_Identity=27.8606965174129, Blast_Score=64, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6322861, Length=276, Percent_Identity=43.4782608695652, Blast_Score=196, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6324126, Length=251, Percent_Identity=30.2788844621514, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI18859837, Length=238, Percent_Identity=45.7983193277311, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=35.0806451612903, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI17737361, Length=225, Percent_Identity=29.7777777777778, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=27.34375, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI281364892, Length=213, Percent_Identity=26.2910798122066, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI21355319, Length=248, Percent_Identity=26.2096774193548, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24649181, Length=184, Percent_Identity=27.7173913043478, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24640492, Length=194, Percent_Identity=26.2886597938144, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24644339, Length=192, Percent_Identity=26.0416666666667, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24580925, Length=193, Percent_Identity=27.4611398963731, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 32117; Mature: 31986
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLMAGKVALVTGAGGGIGRGIALAMAAAGAKVVVNDLGVSMTGEGGDAGPAQRVVEEI CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCCHHHHHHHHH RAAGGEAVANTDSVSTWNGANAIVQCALDNFGRIDAVVNNAGNLRDRMFFKMNEEEWRSV HHCCCCEECCCCCCCCCCCCHHHEEEHHHCCCCCHHHHCCCCCCCHHEEEEECHHHHHCE IDVHLHGTFFVSRAAANYFKDQEGGAFVHMTSTSGLIGNLGQANYSAAKLGIAALSKSIA EEEEECCCEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH LDMQRFNVRSNCIAPFAWSRMTSSIPAETPEEKARVAKLQKMEAGKIGPVAVYLASPSAA HHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCC EVNGQIFAVRANEIILMSQPRPVRSVHMSEGWTPESIGEIAMPAMRNSFFKLERSPDVIS CCCCEEEEEECCEEEEEECCCCHHEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEE WDPI CCCC >Mature Secondary Structure SGLMAGKVALVTGAGGGIGRGIALAMAAAGAKVVVNDLGVSMTGEGGDAGPAQRVVEEI CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCCHHHHHHHHH RAAGGEAVANTDSVSTWNGANAIVQCALDNFGRIDAVVNNAGNLRDRMFFKMNEEEWRSV HHCCCCEECCCCCCCCCCCCHHHEEEHHHCCCCCHHHHCCCCCCCHHEEEEECHHHHHCE IDVHLHGTFFVSRAAANYFKDQEGGAFVHMTSTSGLIGNLGQANYSAAKLGIAALSKSIA EEEEECCCEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH LDMQRFNVRSNCIAPFAWSRMTSSIPAETPEEKARVAKLQKMEAGKIGPVAVYLASPSAA HHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCC EVNGQIFAVRANEIILMSQPRPVRSVHMSEGWTPESIGEIAMPAMRNSFFKLERSPDVIS CCCCEEEEEECCEEEEEECCCCHHEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEE WDPI CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]