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The map label for this gene is 73537315

Identifier: 73537315

GI number: 73537315

Start: 16819

End: 17283

Strand: Direct

Name: 73537315

Synonym: Reut_B3480

Alternate gene names: NA

Gene position: 16819-17283 (Clockwise)

Preceding gene: 73537311

Following gene: 73537318

Centisome position: 0.62

GC content: 68.82

Gene sequence:

>465_bases
ATGCGGGCCTGTCCATCCGGGCCATCCGGCCCATCCGGACCCCACTCCGACGTACGACTCATGCATCACGCTGTACCGCG
CCGGCTGGCGGCCCTGACTTGCCTTGCCGTGGCTTTTGCCGCTTCCGCCGCTTCCGCCGCTTCTTCCGCTTCCGCCGCCG
ACATCCAGGCCGGCAAGGCGCTGTTTGCTACCCGTTGCGCGTCGTGCCACAGCGTGGGCCCGTCCGCACGCGGCGCCTTC
GGCCCGCAGCTCAACGCCGTCTTCGGCCGGCGCGCGGGCAGCACTTCCGACTATCGCTATTCGCCCGCCATGACCGCGTC
CGGCGTGGTGTGGACGGCCGACACGCTGCGCGCGTTCATCAAATCGCCGGGCAAGGTCGTGCCAGGTACGCGCATGCGCT
TCTGGGGCATCGGCAACGACCAGCAGATCGACGACCTGCTGGCCTACCTGCAGACTTACCGGTAA

Upstream 100 bases:

>100_bases
GCGGCCATTCTCGAACCAGAACACGACAGGTTCGATCCGAAAAGCGGCTGGCTGCCGATCGCGCGGCTGTCTGACGTGCG
GTGGCGCGCATCGCGCTATC

Downstream 100 bases:

>100_bases
CCGTCCGCCTCGATCGCATCGACGGCATAGACAGCGTCAGGGAAAGCCGTATCCCACCGTGGCCAGGAACTGGTTCTTCT
GGCTGACGCCGAAGCGGTTC

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome c550 [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRACPSGPSGPSGPHSDVRLMHHAVPRRLAALTCLAVAFAASAASAASSASAADIQAGKALFATRCASCHSVGPSARGAF
GPQLNAVFGRRAGSTSDYRYSPAMTASGVVWTADTLRAFIKSPGKVVPGTRMRFWGIGNDQQIDDLLAYLQTYR

Sequences:

>Translated_154_residues
MRACPSGPSGPSGPHSDVRLMHHAVPRRLAALTCLAVAFAASAASAASSASAADIQAGKALFATRCASCHSVGPSARGAF
GPQLNAVFGRRAGSTSDYRYSPAMTASGVVWTADTLRAFIKSPGKVVPGTRMRFWGIGNDQQIDDLLAYLQTYR
>Mature_154_residues
MRACPSGPSGPSGPHSDVRLMHHAVPRRLAALTCLAVAFAASAASAASSASAADIQAGKALFATRCASCHSVGPSARGAF
GPQLNAVFGRRAGSTSDYRYSPAMTASGVVWTADTLRAFIKSPGKVVPGTRMRFWGIGNDQQIDDLLAYLQTYR

Specific function: Unknown

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI11128019, Length=99, Percent_Identity=37.3737373737374, Blast_Score=97, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17539604, Length=104, Percent_Identity=38.4615384615385, Blast_Score=85, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17566554, Length=99, Percent_Identity=37.3737373737374, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6322508, Length=104, Percent_Identity=32.6923076923077, Blast_Score=86, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6320796, Length=95, Percent_Identity=33.6842105263158, Blast_Score=85, Evalue=4e-18,
Organism=Drosophila melanogaster, GI17137228, Length=101, Percent_Identity=38.6138613861386, Blast_Score=96, Evalue=7e-21,
Organism=Drosophila melanogaster, GI17137204, Length=103, Percent_Identity=34.9514563106796, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 16027; Mature: 16027

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRACPSGPSGPSGPHSDVRLMHHAVPRRLAALTCLAVAFAASAASAASSASAADIQAGKA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LFATRCASCHSVGPSARGAFGPQLNAVFGRRAGSTSDYRYSPAMTASGVVWTADTLRAFI
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEECCCCCCCCEEECHHHHHHHH
KSPGKVVPGTRMRFWGIGNDQQIDDLLAYLQTYR
HCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRACPSGPSGPSGPHSDVRLMHHAVPRRLAALTCLAVAFAASAASAASSASAADIQAGKA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LFATRCASCHSVGPSARGAFGPQLNAVFGRRAGSTSDYRYSPAMTASGVVWTADTLRAFI
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEECCCCCCCCEEECHHHHHHHH
KSPGKVVPGTRMRFWGIGNDQQIDDLLAYLQTYR
HCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6291614 [H]