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The map label for this gene is ykrA [H]

Identifier: 71911328

GI number: 71911328

Start: 1467858

End: 1469135

Strand: Reverse

Name: ykrA [H]

Synonym: M5005_Spy_1515

Alternate gene names: 71911328

Gene position: 1469135-1467858 (Counterclockwise)

Preceding gene: 71911330

Following gene: 71911326

Centisome position: 79.91

GC content: 38.03

Gene sequence:

>1278_bases
ATGGTCGGTTTAGCAACTGGTCGTGGACCGGGATTTGTACAACCTTTTCTAGAAAATTTTGGATTAGATTTTGCCGTTAC
TTACAATGGGCAATATATCTTAACAAGAGATAAGGTCTTATATCAGAATCAATTGCCAAAGTCGATGATTTACAAAGTGA
TTCGCTATGCCAACGAAAAAAAGCGAGAAATTTCTCTTGGAACAGCTTCTGGATTAGCAGGATCGCGTATTATTGATATG
GGGACTAGCCCATTTGGACAAGTCATTAGTAGTTTTGTGCCCAAAAGTTGGGCAAGAACAGTTGAGGGTAGTTTTAAGCA
TTTGATTCGCCGAATCAAGCCTCAGAGTTTTAGAAATTTAGTAACTATTATGCGGGAGCCTATTTATCAGGTTGTTCTGG
TAGCGTCACAAGCTGAAACTAAGAAAATACAAGAGAAGTTCCCTCATATAAAAATTACAAGAAGTAGTCCTTATTCCTTG
GATCTGATCTCTGTTGATCAATCAAAAATAAAAGGAATTGAACGTTTGGGAGAGATGTTTGGATTTGACTTGTCTGAAGT
GATGGCTTTTGGAGATTCAGATAATGACCTTGAAATGTTATCAGGAGTTGGTATCGGTATTGCTATGGGAAATGCTGAAA
CTGTGGTAAAAGATGGAGCCCATTTCACTACCGACTCTAATAATAATGATGGGATTTCCAAAGCCTTAGCTCACTACGGT
CTCATCCATTTTGATATAGAGAAGAGCTTTAAAAGCCGTGATGAAAATTTTAATAAAGTCAAAGATTTTCATCGTCTGAT
GGACTCAGATACTATTGAAACACCGCGTAGTTATACCATTTCAGAAGCTGGTTATAGGTCAGGCTTTAAAGTAGAAGAAA
TTGTTGAGTTTCTTTACGCAGCAAGCAAGGGAGACCAACAACAATTTACACAGGCTATTTTCGATTTGCATGGTGCTGTT
GACCAAGCAGCTAATAAGGTACAAGCTAAAAAACATGTTGAAACGCCCCTGATTGGGCAAGTTGATGCCTTAGCGGATTT
GCTTTATTTTACTTATGGTTCTTTTGTACTGATGGGAGTAGATCCACAACCTATATTTGAAGCAGTACATGAAGCAAATA
TGGCTAAAATTTTTCCAGATGGCAAGGCACACTTTGACCCCGTTACCCATAAAATTCAAAAACCTGACTATTGGCAAGAG
CGTCACGCACCTGAAGTAGCCATAAAAAAAGAGTTAGACAAACAATTACAAAAATCACTACAACGATTCGATAAATAG

Upstream 100 bases:

>100_bases
AGCAGTCTTTTTTGATATTGATGGGACCCTTCTCAATGATCGTAAAAATATCCAAAAAACAACGCAAAAAGCCATCCAAC
AACTCAAAAAACAAGGCATT

Downstream 100 bases:

>100_bases
AGGTTTACTCTTTTAAATATCAAGAAATAAAAAGATATTGACTAGACTTAGCTCAGCACAAAAAAACAAGCAATTTCGTT
GTAGATGCTGCTTGTTTTTT

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQNQLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDM
GTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTIMREPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSL
DLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGVGIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYG
LIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEAGYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAV
DQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQPIFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQE
RHAPEVAIKKELDKQLQKSLQRFDK

Sequences:

>Translated_425_residues
MVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQNQLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDM
GTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTIMREPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSL
DLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGVGIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYG
LIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEAGYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAV
DQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQPIFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQE
RHAPEVAIKKELDKQLQKSLQRFDK
>Mature_425_residues
MVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQNQLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDM
GTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTIMREPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSL
DLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGVGIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYG
LIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEAGYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAV
DQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQPIFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQE
RHAPEVAIKKELDKQLQKSLQRFDK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=249, Percent_Identity=26.9076305220884, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 47765; Mature: 47765

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQNQLPKSMIYKVIRYANEK
CCCCCCCCCCCHHHHHHHHCCCCEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCH
KREISLGTASGLAGSRIIDMGTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNL
HHEEECCCCCCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHH
VTIMREPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHH
GFDLSEVMAFGDSDNDLEMLSGVGIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYG
CCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCHHHHCCCCEEECCCCCCCHHHHHHHHHC
LIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEAGYRSGFKVEEIVEFLYA
EEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHH
ASKGDQQQFTQAIFDLHGAVDQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECC
DPQPIFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSL
CCHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHH
QRFDK
HHHCC
>Mature Secondary Structure
MVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQNQLPKSMIYKVIRYANEK
CCCCCCCCCCCHHHHHHHHCCCCEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCH
KREISLGTASGLAGSRIIDMGTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNL
HHEEECCCCCCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHH
VTIMREPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHH
GFDLSEVMAFGDSDNDLEMLSGVGIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYG
CCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCHHHHCCCCEEECCCCCCCHHHHHHHHHC
LIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEAGYRSGFKVEEIVEFLYA
EEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHH
ASKGDQQQFTQAIFDLHGAVDQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECC
DPQPIFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSL
CCHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHH
QRFDK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]