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The map label for this gene is int.3 [C]

Identifier: 71911280

GI number: 71911280

Start: 1424880

End: 1425959

Strand: Direct

Name: int.3 [C]

Synonym: M5005_Spy_1467

Alternate gene names: 71911280

Gene position: 1424880-1425959 (Clockwise)

Preceding gene: 71911279

Following gene: 71911285

Centisome position: 77.5

GC content: 38.15

Gene sequence:

>1080_bases
ATGGCATTTTATCGAAAATTAGGTTCTGGGTGGGAGTATCGCATCACCTATCGTGACAGTCAAGGTAAAAAAAGAGAAAA
ATCAAAACGTGGATTTAAAACAAAAACACTTGCAAAAGTCGCTGCTCAGCAAGCAGAAATTGATTTAAATACGCTGACCG
CAGACCTTTTAGATATTACTGTTTTAGACTACAACAGACGTTGGGCAGACATATATAAAAGGCCTCACATTACCGCAAAG
ACATGGCAGACATACACCAAAAATTTTAAGCACATCGAACATTATTTTGGGACTCGGAAGCTCAAGAGTATCACACACAC
CTTTTATCAGCAAGTCCTTAATGACTTTGGCGCAAAAGTAGCCCAACAAACTCTGGATAAATTTCATTATCAAATCAAGG
GTGCTTGTAAAATGGCCATTCGTGATGGCATTATTAGGGATAATTTTGCCGATGGGGCCATTGTTAGATCGCAAAAACCC
GCTAAAGAAGAGTCAGAGAAATTCATGGAAGAATCAGAATACCTCGCCTTTATCAAGGTTGCCAAAAGCAAAGTCAAGTA
CCCATCATACCTGACAACGTATATCATAGCCGTCACCGGTTTACGATTTGCAGAGGTTCAAGGGTTGACTTGGAAAGACA
TTGATTTTGAGAATGGCTATATCGATATTAATAAAACTTTTGATTATTCAATTTCTCAAAATTTCGGTCCGACCAAAAAC
GAGCAGTCCATCAGGAAGGTACCGATTGATAAAAATAGCCTTGAGATACTAAGAAATTTTAAGAGCGACTATTATCAGGA
TAATAAACTCGGTCGTGTATGCTTTGGAGCGTCAAATAATGCAACGAACAAAGTTATAAAAAGAGTGACTGGCAGAAATC
TAACCAATCACTCGCTAAGGCATACTTACGCTTCTTATTTGATAGCGCAGGGCGTTGATTTAATATCAGTATCCAAGCTG
TTGGGGCACGAAAATCTCAACATCACACTCAAAGTTTACGCTCATCAGATAGAAAGTTTAAAAGAAAAAAATGACCATCA
GGTCAAAAACATTTTTCAAAATCTCAAATTTGACGGGTGA

Upstream 100 bases:

>100_bases
AAATTTGGCGAGGAGAGCGTGAGGCAAAACCGTATAAGAAACAACCATTAAAAAGGTCGTTTTCTTGTACCCATTTTAAC
AGAAAAATGAGGTGAAAACA

Downstream 100 bases:

>100_bases
AAGACGGGCGAAGACCCCGAAACCCTTGATATATCAAGAGGATAAAAGGAGAGGAGGGGATTCGAACCCCCGAGCCTCGT
TAAGGACTACACGCTTTCCA

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MAFYRKLGSGWEYRITYRDSQGKKREKSKRGFKTKTLAKVAAQQAEIDLNTLTADLLDITVLDYNRRWADIYKRPHITAK
TWQTYTKNFKHIEHYFGTRKLKSITHTFYQQVLNDFGAKVAQQTLDKFHYQIKGACKMAIRDGIIRDNFADGAIVRSQKP
AKEESEKFMEESEYLAFIKVAKSKVKYPSYLTTYIIAVTGLRFAEVQGLTWKDIDFENGYIDINKTFDYSISQNFGPTKN
EQSIRKVPIDKNSLEILRNFKSDYYQDNKLGRVCFGASNNATNKVIKRVTGRNLTNHSLRHTYASYLIAQGVDLISVSKL
LGHENLNITLKVYAHQIESLKEKNDHQVKNIFQNLKFDG

Sequences:

>Translated_359_residues
MAFYRKLGSGWEYRITYRDSQGKKREKSKRGFKTKTLAKVAAQQAEIDLNTLTADLLDITVLDYNRRWADIYKRPHITAK
TWQTYTKNFKHIEHYFGTRKLKSITHTFYQQVLNDFGAKVAQQTLDKFHYQIKGACKMAIRDGIIRDNFADGAIVRSQKP
AKEESEKFMEESEYLAFIKVAKSKVKYPSYLTTYIIAVTGLRFAEVQGLTWKDIDFENGYIDINKTFDYSISQNFGPTKN
EQSIRKVPIDKNSLEILRNFKSDYYQDNKLGRVCFGASNNATNKVIKRVTGRNLTNHSLRHTYASYLIAQGVDLISVSKL
LGHENLNITLKVYAHQIESLKEKNDHQVKNIFQNLKFDG
>Mature_358_residues
AFYRKLGSGWEYRITYRDSQGKKREKSKRGFKTKTLAKVAAQQAEIDLNTLTADLLDITVLDYNRRWADIYKRPHITAKT
WQTYTKNFKHIEHYFGTRKLKSITHTFYQQVLNDFGAKVAQQTLDKFHYQIKGACKMAIRDGIIRDNFADGAIVRSQKPA
KEESEKFMEESEYLAFIKVAKSKVKYPSYLTTYIIAVTGLRFAEVQGLTWKDIDFENGYIDINKTFDYSISQNFGPTKNE
QSIRKVPIDKNSLEILRNFKSDYYQDNKLGRVCFGASNNATNKVIKRVTGRNLTNHSLRHTYASYLIAQGVDLISVSKLL
GHENLNITLKVYAHQIESLKEKNDHQVKNIFQNLKFDG

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 41624; Mature: 41493

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFYRKLGSGWEYRITYRDSQGKKREKSKRGFKTKTLAKVAAQQAEIDLNTLTADLLDIT
CCHHHHHCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHEEE
VLDYNRRWADIYKRPHITAKTWQTYTKNFKHIEHYFGTRKLKSITHTFYQQVLNDFGAKV
EECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQQTLDKFHYQIKGACKMAIRDGIIRDNFADGAIVRSQKPAKEESEKFMEESEYLAFIKV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH
AKSKVKYPSYLTTYIIAVTGLRFAEVQGLTWKDIDFENGYIDINKTFDYSISQNFGPTKN
HHHHCCCCHHHHHHHHHHHCCHHHHCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCC
EQSIRKVPIDKNSLEILRNFKSDYYQDNKLGRVCFGASNNATNKVIKRVTGRNLTNHSLR
CCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHHH
HTYASYLIAQGVDLISVSKLLGHENLNITLKVYAHQIESLKEKNDHQVKNIFQNLKFDG
HHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AFYRKLGSGWEYRITYRDSQGKKREKSKRGFKTKTLAKVAAQQAEIDLNTLTADLLDIT
CHHHHHCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHEEE
VLDYNRRWADIYKRPHITAKTWQTYTKNFKHIEHYFGTRKLKSITHTFYQQVLNDFGAKV
EECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQQTLDKFHYQIKGACKMAIRDGIIRDNFADGAIVRSQKPAKEESEKFMEESEYLAFIKV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH
AKSKVKYPSYLTTYIIAVTGLRFAEVQGLTWKDIDFENGYIDINKTFDYSISQNFGPTKN
HHHHCCCCHHHHHHHHHHHCCHHHHCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCC
EQSIRKVPIDKNSLEILRNFKSDYYQDNKLGRVCFGASNNATNKVIKRVTGRNLTNHSLR
CCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHHH
HTYASYLIAQGVDLISVSKLLGHENLNITLKVYAHQIESLKEKNDHQVKNIFQNLKFDG
HHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]