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The map label for this gene is ypmS [H]

Identifier: 71911037

GI number: 71911037

Start: 1179250

End: 1179837

Strand: Reverse

Name: ypmS [H]

Synonym: M5005_Spy_1224

Alternate gene names: 71911037

Gene position: 1179837-1179250 (Counterclockwise)

Preceding gene: 71911038

Following gene: 71911036

Centisome position: 64.17

GC content: 31.97

Gene sequence:

>588_bases
ATGAAAAAAAAATCAAACCTTAATTGGTGGAAGTGGAGCTTCTTATGTCTGCTTGCTTTTAATACCGCCTTTTTGATGGT
TATTGCAAGTCGTCTCATTCAAGTAAGAGAACCTGAGTCAGAACTGATTGCTAAAAAACCAGTTAAAAATATCAAAATTG
GTACATTTGTTACAACCAGAGAACAGCTTAACGAAACTGTAGCAAGTTATCTTAAAGATTATCAGACTGAAAAAATGTCT
TATAAATTTTATGCGACATCTTCTTCTATTTTGTTTGAAGGAACTTATCAATTATTAGGGTATGAAGTCCCTTTATATAT
CTATTTTCAACCTCATCGTCTAGAAAATGGAGCTGTCCAACTACAGGTGATCTCTTTTTCAGTGGGAACTCTGCCACTCC
CAGAAAAAGATGTTTTGCAGTATTTGAAATCAAGCTACAAATTGCCAAGCTTTGTTAAAGTGATGCCAAATCAATCAGCT
ATCGTTGTTAATTTACAAGATATCCAAAATGATGCTAAGGTTTATTTAAAAGCCAAGAAAATTGATTTATTTAATGATGA
AATCAGTTTTAACATCTATAAGAAATAA

Upstream 100 bases:

>100_bases
ACAATTGTCAATGATGCCTTGTTTACTGGGGACCATTTTCACCCAAATAATACTGGCTATCAAATCATGTCAAATGCAGT
AATGGAGAAAATTAAAAAGC

Downstream 100 bases:

>100_bases
GCTCAAATAACGTTAAATACTTGACCTAATCGCTTTTTTTAGATATGATAATATCTGTTAAAGCATTAAGCTTACTAATT
ATTTGGAGGATTTGTTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKKKSNLNWWKWSFLCLLAFNTAFLMVIASRLIQVREPESELIAKKPVKNIKIGTFVTTREQLNETVASYLKDYQTEKMS
YKFYATSSSILFEGTYQLLGYEVPLYIYFQPHRLENGAVQLQVISFSVGTLPLPEKDVLQYLKSSYKLPSFVKVMPNQSA
IVVNLQDIQNDAKVYLKAKKIDLFNDEISFNIYKK

Sequences:

>Translated_195_residues
MKKKSNLNWWKWSFLCLLAFNTAFLMVIASRLIQVREPESELIAKKPVKNIKIGTFVTTREQLNETVASYLKDYQTEKMS
YKFYATSSSILFEGTYQLLGYEVPLYIYFQPHRLENGAVQLQVISFSVGTLPLPEKDVLQYLKSSYKLPSFVKVMPNQSA
IVVNLQDIQNDAKVYLKAKKIDLFNDEISFNIYKK
>Mature_195_residues
MKKKSNLNWWKWSFLCLLAFNTAFLMVIASRLIQVREPESELIAKKPVKNIKIGTFVTTREQLNETVASYLKDYQTEKMS
YKFYATSSSILFEGTYQLLGYEVPLYIYFQPHRLENGAVQLQVISFSVGTLPLPEKDVLQYLKSSYKLPSFVKVMPNQSA
IVVNLQDIQNDAKVYLKAKKIDLFNDEISFNIYKK

Specific function: Unknown

COG id: COG4698

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018672 [H]

Pfam domain/function: PF09911 DUF2140 [H]

EC number: NA

Molecular weight: Translated: 22648; Mature: 22648

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSNLNWWKWSFLCLLAFNTAFLMVIASRLIQVREPESELIAKKPVKNIKIGTFVTTR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEEECH
EQLNETVASYLKDYQTEKMSYKFYATSSSILFEGTYQLLGYEVPLYIYFQPHRLENGAVQ
HHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEEEHCCEECCEEEEEECEECCCCEEE
LQVISFSVGTLPLPEKDVLQYLKSSYKLPSFVKVMPNQSAIVVNLQDIQNDAKVYLKAKK
EEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHHCCCCEEEEEEEEE
IDLFNDEISFNIYKK
EEEECCCEEEEEECC
>Mature Secondary Structure
MKKKSNLNWWKWSFLCLLAFNTAFLMVIASRLIQVREPESELIAKKPVKNIKIGTFVTTR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEEECH
EQLNETVASYLKDYQTEKMSYKFYATSSSILFEGTYQLLGYEVPLYIYFQPHRLENGAVQ
HHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEEEHCCEECCEEEEEECEECCCCEEE
LQVISFSVGTLPLPEKDVLQYLKSSYKLPSFVKVMPNQSAIVVNLQDIQNDAKVYLKAKK
EEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHHCCCCEEEEEEEEE
IDLFNDEISFNIYKK
EEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]