Definition | Streptococcus pyogenes MGAS5005 chromosome, complete genome. |
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Accession | NC_007297 |
Length | 1,838,554 |
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The map label for this gene is xis
Identifier: 71911025
GI number: 71911025
Start: 1172277
End: 1172588
Strand: Reverse
Name: xis
Synonym: M5005_Spy_1212
Alternate gene names: NA
Gene position: 1172588-1172277 (Counterclockwise)
Preceding gene: 71911026
Following gene: 71911024
Centisome position: 63.78
GC content: 35.58
Gene sequence:
>312_bases ATGCCAAAAGCAGAAATTACTTATAGAGCAGTTGATGTTAATGAAACAGCTTCTCATGGTGATTATAAACACTTGATTCA ACAATGGGAGGGGTTGACAGTTGCTACTGCAAAGCAGTGGGCGACAGAAATGCGTGATCATCCAGACTTTAAACAGTTTG TATTAAATCCAACGCATAGAATCGTATTCATTGATTACGAAGGATTCAAACTGTTTGTACAGTGGAAATCTCGCAATCGT TATAAAACAAAAAAAGAGACACTGTCAGAAATGCTTGAAAATATTAAATTCGAAAAAAGAGTAGGAGCATAA
Upstream 100 bases:
>100_bases TCAGCTTGGACGAATTCAGATAACAAAAAAAGTCCGACGGCAATCGGACTCAAAACTAGATTAATTTACTTAATTATACC ACAAGAGAGAGGATATTAAT
Downstream 100 bases:
>100_bases CATGAACAAATTAGAACTATTTTTATTAGTAACAACGATCATCTTAGCAATCATCACTAGAGTACAACACGAAGTCATTA AAAAACATAATTCGCCAGAG
Product: excisionase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MPKAEITYRAVDVNETASHGDYKHLIQQWEGLTVATAKQWATEMRDHPDFKQFVLNPTHRIVFIDYEGFKLFVQWKSRNR YKTKKETLSEMLENIKFEKRVGA
Sequences:
>Translated_103_residues MPKAEITYRAVDVNETASHGDYKHLIQQWEGLTVATAKQWATEMRDHPDFKQFVLNPTHRIVFIDYEGFKLFVQWKSRNR YKTKKETLSEMLENIKFEKRVGA >Mature_102_residues PKAEITYRAVDVNETASHGDYKHLIQQWEGLTVATAKQWATEMRDHPDFKQFVLNPTHRIVFIDYEGFKLFVQWKSRNRY KTKKETLSEMLENIKFEKRVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12262; Mature: 12131
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKAEITYRAVDVNETASHGDYKHLIQQWEGLTVATAKQWATEMRDHPDFKQFVLNPTHR CCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCCCCHHHHHCCCCCE IVFIDYEGFKLFVQWKSRNRYKTKKETLSEMLENIKFEKRVGA EEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure PKAEITYRAVDVNETASHGDYKHLIQQWEGLTVATAKQWATEMRDHPDFKQFVLNPTHR CCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCCCCHHHHHCCCCCE IVFIDYEGFKLFVQWKSRNRYKTKKETLSEMLENIKFEKRVGA EEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA