Definition | Streptococcus pyogenes MGAS5005 chromosome, complete genome. |
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Accession | NC_007297 |
Length | 1,838,554 |
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The map label for this gene is spd3
Identifier: 71910982
GI number: 71910982
Start: 1146085
End: 1146885
Strand: Direct
Name: spd3
Synonym: M5005_Spy_1169
Alternate gene names: NA
Gene position: 1146085-1146885 (Clockwise)
Preceding gene: 71910978
Following gene: 71910983
Centisome position: 62.34
GC content: 36.7
Gene sequence:
>801_bases ATGTCTAAATCAAATCGTCGTACTTGGCAAGGTTTAGTTGTTATTTTAATAGCTATTCTCACCACTTTTACCACAAGTAC TGTTACGGCAGCCAGAAAAATTAGAAATTTCCCTGATACCACGGAAATTTTGTTAGGAACGAAGGCGACTGAGACACCAG GAATCTTACCATTCACTGGTAGCTACCAATTAGTTTTGGGCGATCTTGACAATCTGCAAAGGCCAACCTTCGCACACATC CAGCTAAAAGATCAAGATGAGCCTAATATTAAACGAAAAGGACTTAAATTCAATCCTCCTGGCTGGCATAATTACAAATT GACTGACGCTAATGGAAAAACAACTTGGTTAATGGACCGTGGCCATTTAGTTGGTTACCAATTTAGCGGCTTAAATGACG AGCCTAAAAACCTAGTTACAATGACAAAATATCTTAATACTGGCTTTAGTGACAAAAATCCTTTAGGAATGCTCTATTAT GAAAATAGATTAGATAGCTGGTTAGCTCTACACCCTAACTTCTGGCTAGACTATAAAGTTACTCCTGTTTATCATAAAAA TGAGTTAGTTCCTCGCCAAGTAGTTCTACAGTATGTTGGAATTGATGAAAATGGAGATCTACTTCAAATTAAGTTAGGTA GTGAAAAAGAAAGTGTAGACAACTTTGGAGTAACATCAGTTACATTAGATAACGTATCTCCTTTAGCTGAATTGGATTAC CAAACAGGAATGATGCTAGATTCAACTCAAAACGAAGAAGATAGTAATTTAGAAACCGAAGAGTTTGAAGAAGCGGCTTA A
Upstream 100 bases:
>100_bases TTTAGCGTAATATTATTGATAAATTAATTTTATTAATTTTAAGTTTTTTTAATTTAAAGTGATATAATTAACCTGTAAAT AATAAAAGGAGGACATGGAT
Downstream 100 bases:
>100_bases CATAAACTTATACTTAATAAAAATATCTAGATTGTGAACATTATCCCAAATGTTAGATTATTTATTTAATATTTGGGGTA ATTTGTATAAAGTTAAATTT
Product: streptodornase
Products: NA
Alternate protein names: Prophage Lp1 Protein; Deoxyribonuclease; DNA/RNA Non-Specific Endonuclease; Membrane Nuclease; Endonuclease; StreptodoRNAse; StreptodoRNAse A Type SdzA; Extracellular/Cell Surface DNA-Entry Nuclease; Prophage Nuclease
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSKSNRRTWQGLVVILIAILTTFTTSTVTAARKIRNFPDTTEILLGTKATETPGILPFTGSYQLVLGDLDNLQRPTFAHI QLKDQDEPNIKRKGLKFNPPGWHNYKLTDANGKTTWLMDRGHLVGYQFSGLNDEPKNLVTMTKYLNTGFSDKNPLGMLYY ENRLDSWLALHPNFWLDYKVTPVYHKNELVPRQVVLQYVGIDENGDLLQIKLGSEKESVDNFGVTSVTLDNVSPLAELDY QTGMMLDSTQNEEDSNLETEEFEEAA
Sequences:
>Translated_266_residues MSKSNRRTWQGLVVILIAILTTFTTSTVTAARKIRNFPDTTEILLGTKATETPGILPFTGSYQLVLGDLDNLQRPTFAHI QLKDQDEPNIKRKGLKFNPPGWHNYKLTDANGKTTWLMDRGHLVGYQFSGLNDEPKNLVTMTKYLNTGFSDKNPLGMLYY ENRLDSWLALHPNFWLDYKVTPVYHKNELVPRQVVLQYVGIDENGDLLQIKLGSEKESVDNFGVTSVTLDNVSPLAELDY QTGMMLDSTQNEEDSNLETEEFEEAA >Mature_265_residues SKSNRRTWQGLVVILIAILTTFTTSTVTAARKIRNFPDTTEILLGTKATETPGILPFTGSYQLVLGDLDNLQRPTFAHIQ LKDQDEPNIKRKGLKFNPPGWHNYKLTDANGKTTWLMDRGHLVGYQFSGLNDEPKNLVTMTKYLNTGFSDKNPLGMLYYE NRLDSWLALHPNFWLDYKVTPVYHKNELVPRQVVLQYVGIDENGDLLQIKLGSEKESVDNFGVTSVTLDNVSPLAELDYQ TGMMLDSTQNEEDSNLETEEFEEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30152; Mature: 30021
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSNRRTWQGLVVILIAILTTFTTSTVTAARKIRNFPDTTEILLGTKATETPGILPFTG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCCCEEEECC SYQLVLGDLDNLQRPTFAHIQLKDQDEPNIKRKGLKFNPPGWHNYKLTDANGKTTWLMDR CCEEEEECCCCCCCCEEEEEEECCCCCCCHHHCCEECCCCCCCCEEEECCCCCEEEEEEC GHLVGYQFSGLNDEPKNLVTMTKYLNTGFSDKNPLGMLYYENRLDSWLALHPNFWLDYKV CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCEEEEEEE TPVYHKNELVPRQVVLQYVGIDENGDLLQIKLGSEKESVDNFGVTSVTLDNVSPLAELDY CCEECCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCEEEEECCCCCHHHCCH QTGMMLDSTQNEEDSNLETEEFEEAA HCCEEEECCCCCCCCCCCHHHHHHCC >Mature Secondary Structure SKSNRRTWQGLVVILIAILTTFTTSTVTAARKIRNFPDTTEILLGTKATETPGILPFTG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCCCEEEECC SYQLVLGDLDNLQRPTFAHIQLKDQDEPNIKRKGLKFNPPGWHNYKLTDANGKTTWLMDR CCEEEEECCCCCCCCEEEEEEECCCCCCCHHHCCEECCCCCCCCEEEECCCCCEEEEEEC GHLVGYQFSGLNDEPKNLVTMTKYLNTGFSDKNPLGMLYYENRLDSWLALHPNFWLDYKV CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCEEEEEEE TPVYHKNELVPRQVVLQYVGIDENGDLLQIKLGSEKESVDNFGVTSVTLDNVSPLAELDY CCEECCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCEEEEECCCCCHHHCCH QTGMMLDSTQNEEDSNLETEEFEEAA HCCEEEECCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA